RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 NUDT10Q8NFP7 164 aa11.13□□□□□ -0.63
SSSCA1-202ENST00000526433 NUDT11Q96G61 164 aa11.13□□□□□ -0.63
SSSCA1-202ENST00000526433 SIVA1O15304 175 aa11.12□□□□□ -0.63
SSSCA1-202ENST00000526433 NDUFS6O75380 124 aaKnown RBP11.12□□□□□ -0.63
SSSCA1-202ENST00000526433 SSTP61278 116 aa11.12□□□□□ -0.63
SSSCA1-202ENST00000526433 FAT2Q9NYQ8 4349 aa11.11□□□□□ -0.63
SSSCA1-202ENST00000526433 K7EN84 100 aa11.11□□□□□ -0.63
SSSCA1-202ENST00000526433 SRP19P09132 144 aaKnown RBP11.11□□□□□ -0.63
SSSCA1-202ENST00000526433 SOHLH1Q5JUK2 328 aa11.11□□□□□ -0.63
SSSCA1-202ENST00000526433 SPANXN1Q5VSR9 72 aa11.11□□□□□ -0.63
SSSCA1-202ENST00000526433 LINC00336Q6ZUF6 198 aa11.11□□□□□ -0.63
SSSCA1-202ENST00000526433 C14orf178Q8N769 122 aaPredicted RBP11.11□□□□□ -0.63
SSSCA1-202ENST00000526433 XKRY2A2RUG3 117 aa11.1□□□□□ -0.63
SSSCA1-202ENST00000526433 IGLC6P0CF74 106 aa11.1□□□□□ -0.63
SSSCA1-202ENST00000526433 FER1L6-AS1Q8NA97 138 aa11.1□□□□□ -0.63
SSSCA1-202ENST00000526433 Q9UF83 564 aa11.1□□□□□ -0.63
SSSCA1-202ENST00000526433 GAGE12JA6NER3 117 aa11.09□□□□□ -0.63
SSSCA1-202ENST00000526433 TIRAPP58753 221 aa11.09□□□□□ -0.63
SSSCA1-202ENST00000526433 GAGE1Q13065 139 aa11.09□□□□□ -0.63
SSSCA1-202ENST00000526433 GAGE4Q13068 117 aa11.09□□□□□ -0.63
SSSCA1-202ENST00000526433 GAGE5Q13069 117 aa11.09□□□□□ -0.63
SSSCA1-202ENST00000526433 GAGE13Q4V321 117 aa11.09□□□□□ -0.63
SSSCA1-202ENST00000526433 TTC32Q5I0X7 151 aa11.09□□□□□ -0.63
SSSCA1-202ENST00000526433 ATP6V0E2Q8NHE4 81 aa11.09□□□□□ -0.63
SSSCA1-202ENST00000526433 TPPP3Q9BW30 176 aa11.09□□□□□ -0.63
SSSCA1-202ENST00000526433 KRTAP1-5Q9BYS1 174 aa11.09□□□□□ -0.63
SSSCA1-202ENST00000526433 RNASE7Q9H1E1 156 aaKnown RBP11.09□□□□□ -0.63
SSSCA1-202ENST00000526433 A0A1W2PPQ1 181 aa11.08□□□□□ -0.64
SSSCA1-202ENST00000526433 PRSS29PA6NIE9 313 aa11.08□□□□□ -0.64
SSSCA1-202ENST00000526433 C6orf223Q8N319 242 aa11.08□□□□□ -0.64
SSSCA1-202ENST00000526433 SMIM7Q9BQ49 75 aa11.08□□□□□ -0.64
SSSCA1-202ENST00000526433 LY96Q9Y6Y9 160 aa11.08□□□□□ -0.64
SSSCA1-202ENST00000526433 ZNF727A8MUV8 499 aa11.07□□□□□ -0.64
SSSCA1-202ENST00000526433 F2Z2F3 143 aa11.07□□□□□ -0.64
SSSCA1-202ENST00000526433 CACNG7P62955 275 aa11.07□□□□□ -0.64
SSSCA1-202ENST00000526433 LYZL1Q6UWQ5 148 aa11.07□□□□□ -0.64
SSSCA1-202ENST00000526433 WFDC10BQ8IUB3 73 aa11.07□□□□□ -0.64
SSSCA1-202ENST00000526433 GTSF1LQ9H1H1 148 aa11.07□□□□□ -0.64
SSSCA1-202ENST00000526433 RPP21Q9H633 154 aaKnown RBP11.07□□□□□ -0.64
SSSCA1-202ENST00000526433 BIRC6Q9NR09 4857 aa11.06□□□□□ -0.64
SSSCA1-202ENST00000526433 LINC00694P0DN24 101 aa11.06□□□□□ -0.64
SSSCA1-202ENST00000526433 RAB4BP61018 213 aa11.06□□□□□ -0.64
SSSCA1-202ENST00000526433 MSRB1Q9NZV6 116 aa11.06□□□□□ -0.64
SSSCA1-202ENST00000526433 C9JQL5 133 aa11.05□□□□□ -0.64
SSSCA1-202ENST00000526433 GATCO43716 136 aaKnown RBP11.05□□□□□ -0.64
SSSCA1-202ENST00000526433 SRSF3P84103 164 aaKnown RBP11.05□□□□□ -0.64
SSSCA1-202ENST00000526433 PEA15Q15121 130 aa11.05□□□□□ -0.64
SSSCA1-202ENST00000526433 FAM231DQ6ZW35 169 aa11.05□□□□□ -0.64
SSSCA1-202ENST00000526433 KIF25-AS1Q9Y6Z4 181 aa11.05□□□□□ -0.64
SSSCA1-202ENST00000526433 TRAV9-2A0A087WT02 112 aa11.04□□□□□ -0.64
SSSCA1-202ENST00000526433 TRAV8-6A0A0B4J262 113 aa11.04□□□□□ -0.64
SSSCA1-202ENST00000526433 F5H697 171 aa11.04□□□□□ -0.64
SSSCA1-202ENST00000526433 SMIM17P0DL12 118 aa11.04□□□□□ -0.64
SSSCA1-202ENST00000526433 ERVFC1-1P60608 527 aa11.04□□□□□ -0.64
SSSCA1-202ENST00000526433 ZNF56Q15929 161 aa11.04□□□□□ -0.64
SSSCA1-202ENST00000526433 OR10J3Q5JRS4 329 aa11.04□□□□□ -0.64
SSSCA1-202ENST00000526433 LELP1Q5T871 98 aa11.04□□□□□ -0.64
SSSCA1-202ENST00000526433 WDR73Q6P4I2 378 aa11.04□□□□□ -0.64
SSSCA1-202ENST00000526433 LINC01551Q86U37 167 aa11.04□□□□□ -0.64
SSSCA1-202ENST00000526433 AP1S3Q96PC3 154 aa11.04□□□□□ -0.64
SSSCA1-202ENST00000526433 TRBV10-1A0A0K0K1A3 114 aa11.03□□□□□ -0.64
SSSCA1-202ENST00000526433 DNAH10OSP0CZ25 163 aa11.03□□□□□ -0.64
SSSCA1-202ENST00000526433 NTF3P20783 257 aa11.03□□□□□ -0.64
SSSCA1-202ENST00000526433 EVI2AP22794 236 aa11.03□□□□□ -0.64
SSSCA1-202ENST00000526433 LINC00315P59091 139 aa11.03□□□□□ -0.64
SSSCA1-202ENST00000526433 TMEM241Q24JQ0 296 aa11.03□□□□□ -0.64
SSSCA1-202ENST00000526433 FAM74A3Q4VXF1 159 aa11.03□□□□□ -0.64
SSSCA1-202ENST00000526433 SMDT1Q9H4I9 107 aa11.03□□□□□ -0.64
SSSCA1-202ENST00000526433 PKD1P98161 4303 aa11.03□□□□□ -0.64
SSSCA1-202ENST00000526433 HECTD4Q9Y4D8 3996 aa11.02□□□□□ -0.64
SSSCA1-202ENST00000526433 A0A1B0GVY2 172 aa11.02□□□□□ -0.65
SSSCA1-202ENST00000526433 BTF3P20290 206 aaKnown RBP11.02□□□□□ -0.65
SSSCA1-202ENST00000526433 CTRLP40313 264 aa11.02□□□□□ -0.65
SSSCA1-202ENST00000526433 RPL36AP83881 106 aaKnown RBP11.02□□□□□ -0.65
SSSCA1-202ENST00000526433 GTSF1Q8WW33 167 aa11.02□□□□□ -0.65
SSSCA1-202ENST00000526433 RPL36ALQ969Q0 106 aaKnown RBP11.02□□□□□ -0.65
SSSCA1-202ENST00000526433 TRBV7-3A0A075B6L6 115 aa11.01□□□□□ -0.65
SSSCA1-202ENST00000526433 IGHV3-38A0A0C4DH36 116 aa11.01□□□□□ -0.65
SSSCA1-202ENST00000526433 A8MWL6 223 aa11.01□□□□□ -0.65
SSSCA1-202ENST00000526433 TNP2Q05952 138 aa11.01□□□□□ -0.65
SSSCA1-202ENST00000526433 OR10G8Q8NGN5 311 aa11.01□□□□□ -0.65
SSSCA1-202ENST00000526433 K7EP13 123 aa11□□□□□ -0.65
SSSCA1-202ENST00000526433 TRGC1P0CF51 173 aa11□□□□□ -0.65
SSSCA1-202ENST00000526433 UBE2D3P61077 147 aa11□□□□□ -0.65
SSSCA1-202ENST00000526433 RAB14P61106 215 aa11□□□□□ -0.65
SSSCA1-202ENST00000526433 UBE2D2P62837 147 aa11□□□□□ -0.65
SSSCA1-202ENST00000526433 TWIST1Q15672 202 aa11□□□□□ -0.65
SSSCA1-202ENST00000526433 NEXN-AS1Q8NBZ9 246 aa11□□□□□ -0.65
SSSCA1-202ENST00000526433 OSTCQ9NRP0 149 aa11□□□□□ -0.65
SSSCA1-202ENST00000526433 TNFRSF18Q9Y5U5 241 aa11□□□□□ -0.65
SSSCA1-202ENST00000526433 A0A087WWC5 75 aa10.99□□□□□ -0.65
SSSCA1-202ENST00000526433 MGPP08493 103 aa10.99□□□□□ -0.65
SSSCA1-202ENST00000526433 CT83Q5H943 113 aa10.99□□□□□ -0.65
SSSCA1-202ENST00000526433 LINC01556Q5JQF7 62 aa10.99□□□□□ -0.65
SSSCA1-202ENST00000526433 CNFNQ9BYD5 112 aa10.99□□□□□ -0.65
SSSCA1-202ENST00000526433 DNAH11Q96DT5 4516 aa10.99□□□□□ -0.65
SSSCA1-202ENST00000526433 FOXA3P55318 350 aaPredicted RBP10.98□□□□□ -0.65
SSSCA1-202ENST00000526433 RPL23P62829 140 aaKnown RBP10.98□□□□□ -0.65
SSSCA1-202ENST00000526433 PGLYRP4Q96LB8 373 aa10.98□□□□□ -0.65
SSSCA1-202ENST00000526433 DPH3P1Q9H4G8 78 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms