RNA–Protein interactions for RNA: ENST00000525617.2

LRRK1-204, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-204ENST00000525617 VPS13DQ5THJ4 4388 aa9.84□□□□□ -0.83
LRRK1-204ENST00000525617 TRBV20OR9-2A0A075B6H5 130 aa9.83□□□□□ -0.84
LRRK1-204ENST00000525617 C19orf71A6NCJ1 209 aa9.83□□□□□ -0.84
LRRK1-204ENST00000525617 GAGE12JA6NER3 117 aa9.83□□□□□ -0.84
LRRK1-204ENST00000525617 CRYGDP07320 174 aa9.83□□□□□ -0.84
LRRK1-204ENST00000525617 GAGE1Q13065 139 aa9.83□□□□□ -0.84
LRRK1-204ENST00000525617 GAGE4Q13068 117 aa9.83□□□□□ -0.84
LRRK1-204ENST00000525617 GAGE5Q13069 117 aa9.83□□□□□ -0.84
LRRK1-204ENST00000525617 GAGE13Q4V321 117 aa9.83□□□□□ -0.84
LRRK1-204ENST00000525617 OR10AG1Q8NH19 301 aa9.83□□□□□ -0.84
LRRK1-204ENST00000525617 GTSF1LQ9H1H1 148 aa9.83□□□□□ -0.84
LRRK1-204ENST00000525617 DNAH10OSP0CZ25 163 aa9.82□□□□□ -0.84
LRRK1-204ENST00000525617 SSTP61278 116 aa9.82□□□□□ -0.84
LRRK1-204ENST00000525617 TNP2Q05952 138 aa9.82□□□□□ -0.84
LRRK1-204ENST00000525617 OR10J3Q5JRS4 329 aa9.82□□□□□ -0.84
LRRK1-204ENST00000525617 C14orf178Q8N769 122 aaPredicted RBP9.82□□□□□ -0.84
LRRK1-204ENST00000525617 TPPP3Q9BW30 176 aa9.82□□□□□ -0.84
LRRK1-204ENST00000525617 EIF5A2Q9GZV4 153 aaKnown RBP9.82□□□□□ -0.84
LRRK1-204ENST00000525617 IGHV3-38A0A0C4DH36 116 aa9.81□□□□□ -0.84
LRRK1-204ENST00000525617 MUC21A0A0G2JKD1 596 aa9.81□□□□□ -0.84
LRRK1-204ENST00000525617 MUC21A0A140T8X8 626 aa9.81□□□□□ -0.84
LRRK1-204ENST00000525617 SMIM17P0DL12 118 aa9.81□□□□□ -0.84
LRRK1-204ENST00000525617 LINC00315P59091 139 aa9.81□□□□□ -0.84
LRRK1-204ENST00000525617 ZNF56Q15929 161 aa9.81□□□□□ -0.84
LRRK1-204ENST00000525617 TOR2AQ5JU69 321 aa9.81□□□□□ -0.84
LRRK1-204ENST00000525617 LELP1Q5T871 98 aa9.81□□□□□ -0.84
LRRK1-204ENST00000525617 C10orf126Q8N4M7 172 aa9.81□□□□□ -0.84
LRRK1-204ENST00000525617 FER1L6-AS1Q8NA97 138 aa9.81□□□□□ -0.84
LRRK1-204ENST00000525617 TRBV10-1A0A0K0K1A3 114 aa9.8□□□□□ -0.84
LRRK1-204ENST00000525617 GZMBP10144 247 aa9.8□□□□□ -0.84
LRRK1-204ENST00000525617 CEBPGP53567 150 aa9.8□□□□□ -0.84
LRRK1-204ENST00000525617 RAB4BP61018 213 aa9.8□□□□□ -0.84
LRRK1-204ENST00000525617 NFE4Q86UQ8 179 aa9.8□□□□□ -0.84
LRRK1-204ENST00000525617 A0A087WWC5 75 aa9.79□□□□□ -0.84
LRRK1-204ENST00000525617 F2Z2F3 143 aa9.79□□□□□ -0.84
LRRK1-204ENST00000525617 IGLC6P0CF74 106 aa9.79□□□□□ -0.84
LRRK1-204ENST00000525617 CACNG7P62955 275 aa9.79□□□□□ -0.84
LRRK1-204ENST00000525617 RPL36AP83881 106 aaKnown RBP9.79□□□□□ -0.84
LRRK1-204ENST00000525617 NUDT10Q8NFP7 164 aa9.79□□□□□ -0.84
LRRK1-204ENST00000525617 OCC1Q8TAD7 63 aa9.79□□□□□ -0.84
LRRK1-204ENST00000525617 RPL36ALQ969Q0 106 aaKnown RBP9.79□□□□□ -0.84
LRRK1-204ENST00000525617 NUDT11Q96G61 164 aa9.79□□□□□ -0.84
LRRK1-204ENST00000525617 FAM210AQ96ND0 272 aa9.79□□□□□ -0.84
LRRK1-204ENST00000525617 AP1S3Q96PC3 154 aa9.79□□□□□ -0.84
LRRK1-204ENST00000525617 F5H697 171 aa9.78□□□□□ -0.84
LRRK1-204ENST00000525617 NDUFS6O75380 124 aaKnown RBP9.78□□□□□ -0.84
LRRK1-204ENST00000525617 LINC00694P0DN24 101 aa9.78□□□□□ -0.84
LRRK1-204ENST00000525617 LINC01556Q5JQF7 62 aa9.78□□□□□ -0.84
LRRK1-204ENST00000525617 MSRB1Q9NZV6 116 aa9.78□□□□□ -0.84
LRRK1-204ENST00000525617 Q9UF83 564 aa9.78□□□□□ -0.84
LRRK1-204ENST00000525617 DNAH6Q9C0G6 4158 aa9.78□□□□□ -0.84
LRRK1-204ENST00000525617 TRBV7-3A0A075B6L6 115 aa9.77□□□□□ -0.85
LRRK1-204ENST00000525617 TEX261Q6UWH6 196 aa9.77□□□□□ -0.85
LRRK1-204ENST00000525617 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.77□□□□□ -0.85
LRRK1-204ENST00000525617 RNASE7Q9H1E1 156 aaKnown RBP9.77□□□□□ -0.85
LRRK1-204ENST00000525617 RPP21Q9H633 154 aaKnown RBP9.77□□□□□ -0.85
LRRK1-204ENST00000525617 EPPK1P58107 5090 aaKnown RBP9.77□□□□□ -0.85
LRRK1-204ENST00000525617 K7EN84 100 aa9.76□□□□□ -0.85
LRRK1-204ENST00000525617 LYZL1Q6UWQ5 148 aa9.76□□□□□ -0.85
LRRK1-204ENST00000525617 SMIM7Q9BQ49 75 aa9.76□□□□□ -0.85
LRRK1-204ENST00000525617 ZNF727A8MUV8 499 aa9.75□□□□□ -0.85
LRRK1-204ENST00000525617 TRGC1P0CF51 173 aa9.75□□□□□ -0.85
LRRK1-204ENST00000525617 TNFRSF18Q9Y5U5 241 aa9.75□□□□□ -0.85
LRRK1-204ENST00000525617 EREGO14944 169 aa9.74□□□□□ -0.85
LRRK1-204ENST00000525617 GATCO43716 136 aaKnown RBP9.74□□□□□ -0.85
LRRK1-204ENST00000525617 IGHV3-30P01768 117 aa9.74□□□□□ -0.85
LRRK1-204ENST00000525617 IGHV3-33P01772 117 aa9.74□□□□□ -0.85
LRRK1-204ENST00000525617 MGPP08493 103 aa9.74□□□□□ -0.85
LRRK1-204ENST00000525617 SRP19P09132 144 aaKnown RBP9.74□□□□□ -0.85
LRRK1-204ENST00000525617 IGHV3-30-3P0DP02 117 aa9.74□□□□□ -0.85
LRRK1-204ENST00000525617 IGHV3-30-5P0DP03 117 aa9.74□□□□□ -0.85
LRRK1-204ENST00000525617 ERVFC1-1P60608 527 aa9.74□□□□□ -0.85
LRRK1-204ENST00000525617 UBE2D3P61077 147 aa9.74□□□□□ -0.85
LRRK1-204ENST00000525617 UBE2D2P62837 147 aa9.74□□□□□ -0.85
LRRK1-204ENST00000525617 WDR73Q6P4I2 378 aa9.74□□□□□ -0.85
LRRK1-204ENST00000525617 Q6ZRN7 208 aaPredicted RBP9.74□□□□□ -0.85
LRRK1-204ENST00000525617 FAM231DQ6ZW35 169 aa9.74□□□□□ -0.85
LRRK1-204ENST00000525617 OR10G8Q8NGN5 311 aa9.74□□□□□ -0.85
LRRK1-204ENST00000525617 KIF25-AS1Q9Y6Z4 181 aa9.74□□□□□ -0.85
LRRK1-204ENST00000525617 IBA57-AS1B1ANH7 110 aa9.73□□□□□ -0.85
LRRK1-204ENST00000525617 H7C1H1 209 aa9.73□□□□□ -0.85
LRRK1-204ENST00000525617 NTF3P20783 257 aa9.73□□□□□ -0.85
LRRK1-204ENST00000525617 CTRLP40313 264 aa9.73□□□□□ -0.85
LRRK1-204ENST00000525617 NEXN-AS1Q8NBZ9 246 aa9.73□□□□□ -0.85
LRRK1-204ENST00000525617 URGCP-MRPS24S4R325 110 aa9.73□□□□□ -0.85
LRRK1-204ENST00000525617 FRAS1Q86XX4 4008 aa9.73□□□□□ -0.85
LRRK1-204ENST00000525617 A8MWL6 223 aa9.72□□□□□ -0.85
LRRK1-204ENST00000525617 PEA15Q15121 130 aa9.72□□□□□ -0.85
LRRK1-204ENST00000525617 TWIST1Q15672 202 aa9.72□□□□□ -0.85
LRRK1-204ENST00000525617 C16orf90A8MZG2 172 aa9.71□□□□□ -0.86
LRRK1-204ENST00000525617 PSCAO43653 123 aa9.71□□□□□ -0.86
LRRK1-204ENST00000525617 LAGE3Q14657 143 aa9.71□□□□□ -0.86
LRRK1-204ENST00000525617 FAM74A3Q4VXF1 159 aa9.71□□□□□ -0.86
LRRK1-204ENST00000525617 KCNIP4Q6PIL6 250 aa9.71□□□□□ -0.86
LRRK1-204ENST00000525617 SPATA12Q7Z6I5 190 aa9.71□□□□□ -0.86
LRRK1-204ENST00000525617 LINC01551Q86U37 167 aa9.71□□□□□ -0.86
LRRK1-204ENST00000525617 DPH3P1Q9H4G8 78 aa9.71□□□□□ -0.86
LRRK1-204ENST00000525617 TMEM97Q5BJF2 176 aa9.7□□□□□ -0.86
LRRK1-204ENST00000525617 CT83Q5H943 113 aa9.7□□□□□ -0.86
LRRK1-204ENST00000525617 SMIM15Q7Z3B0 74 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms