RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 ENY2Q9NPA8 101 aa3.18□□□□□ -1.9
SKP1-213ENST00000524288 NAV3Q8IVL0 2385 aa3.18□□□□□ -1.9
SKP1-213ENST00000524288 ZDBF2Q9HCK1 2354 aa3.18□□□□□ -1.9
SKP1-213ENST00000524288 INTS1Q8N201 2190 aaKnown RBP3.18□□□□□ -1.9
SKP1-213ENST00000524288 SPTBN5Q9NRC6 3674 aaKnown RBP3.17□□□□□ -1.9
SKP1-213ENST00000524288 CUL9Q8IWT3 2517 aa3.17□□□□□ -1.9
SKP1-213ENST00000524288 IGHV1-24A0A0C4DH33 117 aa3.17□□□□□ -1.9
SKP1-213ENST00000524288 PGPA6NDG6 321 aa3.17□□□□□ -1.9
SKP1-213ENST00000524288 OR4C46A6NHA9 309 aa3.17□□□□□ -1.9
SKP1-213ENST00000524288 KLRC4-KLRK1H3BQV0 150 aa3.17□□□□□ -1.9
SKP1-213ENST00000524288 SYS1-DBNDD2H3BUS1 97 aa3.17□□□□□ -1.9
SKP1-213ENST00000524288 M0R2Z0 102 aa3.17□□□□□ -1.9
SKP1-213ENST00000524288 TRGV3P03979 118 aa3.17□□□□□ -1.9
SKP1-213ENST00000524288 HINT1P49773 126 aaPredicted RBP3.17□□□□□ -1.9
SKP1-213ENST00000524288 UBE2L3P68036 154 aaKnown RBP3.17□□□□□ -1.9
SKP1-213ENST00000524288 HIST1H1AQ02539 215 aaPredicted RBP3.17□□□□□ -1.9
SKP1-213ENST00000524288 SRSF6Q13247 344 aaKnown RBP3.17□□□□□ -1.9
SKP1-213ENST00000524288 FXYD3Q14802 87 aa3.17□□□□□ -1.9
SKP1-213ENST00000524288 BVES-AS1Q5T3Y7 98 aa3.17□□□□□ -1.9
SKP1-213ENST00000524288 LINC01545Q5VT33 79 aa3.17□□□□□ -1.9
SKP1-213ENST00000524288 MRPL54Q6P161 138 aaKnown RBP3.17□□□□□ -1.9
SKP1-213ENST00000524288 ZNF826PQ6ZT77 177 aa3.17□□□□□ -1.9
SKP1-213ENST00000524288 ZNF833PQ6ZTB9 187 aa3.17□□□□□ -1.9
SKP1-213ENST00000524288 FAM19A2Q8N3H0 131 aa3.17□□□□□ -1.9
SKP1-213ENST00000524288 FDCSPQ8NFU4 85 aa3.17□□□□□ -1.9
SKP1-213ENST00000524288 TMEM167AQ8TBQ9 72 aa3.17□□□□□ -1.9
SKP1-213ENST00000524288 H1FXQ92522 213 aaKnown RBP3.17□□□□□ -1.9
SKP1-213ENST00000524288 TMEM191AQ9H0A3 160 aa3.17□□□□□ -1.9
SKP1-213ENST00000524288 NDUFA4L2Q9NRX3 87 aa3.17□□□□□ -1.9
SKP1-213ENST00000524288 RPUSD1Q9UJJ7 312 aaKnown RBP3.17□□□□□ -1.9
SKP1-213ENST00000524288 EYSQ5T1H1 3165 aa3.16□□□□□ -1.9
SKP1-213ENST00000524288 IGLV3-9A0A075B6K5 115 aa3.16□□□□□ -1.9
SKP1-213ENST00000524288 IGKV1D-37A0A075B6S9 117 aa3.16□□□□□ -1.9
SKP1-213ENST00000524288 TRGV5A0A0B4J1U4 118 aa3.16□□□□□ -1.9
SKP1-213ENST00000524288 TEX50A0A1B0GTY4 177 aa3.16□□□□□ -1.9
SKP1-213ENST00000524288 TCRBV4S1A1TA0A5B7 111 aa3.16□□□□□ -1.9
SKP1-213ENST00000524288 DEFB108AA8MXU0 73 aa3.16□□□□□ -1.9
SKP1-213ENST00000524288 LTAP01374 205 aa3.16□□□□□ -1.9
SKP1-213ENST00000524288 COX8AP10176 69 aa3.16□□□□□ -1.9
SKP1-213ENST00000524288 ZNF137PP52743 207 aa3.16□□□□□ -1.9
SKP1-213ENST00000524288 FOXA3P55318 350 aaPredicted RBP3.16□□□□□ -1.9
SKP1-213ENST00000524288 TCL1AP56279 114 aa3.16□□□□□ -1.9
SKP1-213ENST00000524288 ARF6P62330 175 aa3.16□□□□□ -1.9
SKP1-213ENST00000524288 SEC11AP67812 179 aa3.16□□□□□ -1.9
SKP1-213ENST00000524288 C10orf113Q5VZT2 155 aa3.16□□□□□ -1.9
SKP1-213ENST00000524288 PATE2Q6UY27 113 aa3.16□□□□□ -1.9
SKP1-213ENST00000524288 C2orf91Q6ZV80 131 aa3.16□□□□□ -1.9
SKP1-213ENST00000524288 SMIM15Q7Z3B0 74 aa3.16□□□□□ -1.9
SKP1-213ENST00000524288 Q86TA4 180 aa3.16□□□□□ -1.9
SKP1-213ENST00000524288 LINC00311Q8N616 119 aa3.16□□□□□ -1.9
SKP1-213ENST00000524288 C5orf17Q8NAS9 161 aa3.16□□□□□ -1.9
SKP1-213ENST00000524288 OR10X1Q8NGY0 326 aa3.16□□□□□ -1.9
SKP1-213ENST00000524288 DNAH14Q0VDD8 3507 aa3.15□□□□□ -1.9
SKP1-213ENST00000524288 TRAV17A0A0B4J275 112 aa3.15□□□□□ -1.91
SKP1-213ENST00000524288 IGHV1-18A0A0C4DH31 117 aa3.15□□□□□ -1.91
SKP1-213ENST00000524288 HIGD1CA8MV81 97 aa3.15□□□□□ -1.91
SKP1-213ENST00000524288 K7ERU9 68 aa3.15□□□□□ -1.91
SKP1-213ENST00000524288 LYZL6O75951 148 aa3.15□□□□□ -1.91
SKP1-213ENST00000524288 TFF1P04155 84 aa3.15□□□□□ -1.91
SKP1-213ENST00000524288 IGLC1P0CG04 106 aa3.15□□□□□ -1.91
SKP1-213ENST00000524288 SAA1P0DJI8 122 aaPredicted RBP3.15□□□□□ -1.91
SKP1-213ENST00000524288 MGST1P10620 155 aaKnown RBP3.15□□□□□ -1.91
SKP1-213ENST00000524288 FGF6P10767 208 aa3.15□□□□□ -1.91
SKP1-213ENST00000524288 EDDM3AQ14507 147 aa3.15□□□□□ -1.91
SKP1-213ENST00000524288 Q56UQ5 140 aa3.15□□□□□ -1.91
SKP1-213ENST00000524288 OCIAD2Q56VL3 154 aa3.15□□□□□ -1.91
SKP1-213ENST00000524288 PSMG4Q5JS54 123 aa3.15□□□□□ -1.91
SKP1-213ENST00000524288 PRR9Q5T870 116 aa3.15□□□□□ -1.91
SKP1-213ENST00000524288 TEX36Q5VZQ5 186 aa3.15□□□□□ -1.91
SKP1-213ENST00000524288 Q6AWC8 147 aa3.15□□□□□ -1.91
SKP1-213ENST00000524288 Q6ZS92 163 aa3.15□□□□□ -1.91
SKP1-213ENST00000524288 SSX8Q7RTT4 187 aa3.15□□□□□ -1.91
SKP1-213ENST00000524288 ATOH7Q8N100 152 aa3.15□□□□□ -1.91
SKP1-213ENST00000524288 OR4C13Q8NGP0 309 aa3.15□□□□□ -1.91
SKP1-213ENST00000524288 VSTM2AQ8TAG5 236 aa3.15□□□□□ -1.91
SKP1-213ENST00000524288 GAFA1Q96PS6 74 aa3.15□□□□□ -1.91
SKP1-213ENST00000524288 TRGV9Q99603 122 aa3.15□□□□□ -1.91
SKP1-213ENST00000524288 CST9LQ9H4G1 147 aa3.15□□□□□ -1.91
SKP1-213ENST00000524288 TMEM14CQ9P0S9 112 aa3.15□□□□□ -1.91
SKP1-213ENST00000524288 HSPB8Q9UJY1 196 aa3.15□□□□□ -1.91
SKP1-213ENST00000524288 EPDR1Q9UM22 224 aa3.15□□□□□ -1.91
SKP1-213ENST00000524288 LINC00312Q9Y6C7 94 aa3.15□□□□□ -1.91
SKP1-213ENST00000524288 TRAV8-2A0A0B4J237 113 aa3.14□□□□□ -1.91
SKP1-213ENST00000524288 MUC21A0A0G2JKD1 596 aa3.14□□□□□ -1.91
SKP1-213ENST00000524288 MUC21A0A140T8X8 626 aa3.14□□□□□ -1.91
SKP1-213ENST00000524288 SPRR5A0A1B0GTR4 108 aa3.14□□□□□ -1.91
SKP1-213ENST00000524288 LINC01546A6NGU7 62 aa3.14□□□□□ -1.91
SKP1-213ENST00000524288 H3BRM9 83 aa3.14□□□□□ -1.91
SKP1-213ENST00000524288 CORTO00230 105 aa3.14□□□□□ -1.91
SKP1-213ENST00000524288 SPINK4O60575 86 aa3.14□□□□□ -1.91
SKP1-213ENST00000524288 LEPROTL1O95214 131 aa3.14□□□□□ -1.91
SKP1-213ENST00000524288 APOA2P02652 100 aa3.14□□□□□ -1.91
SKP1-213ENST00000524288 PYYP10082 97 aa3.14□□□□□ -1.91
SKP1-213ENST00000524288 HLA-DRB4P13762 266 aa3.14□□□□□ -1.91
SKP1-213ENST00000524288 COL8A2P25067 703 aa3.14□□□□□ -1.91
SKP1-213ENST00000524288 PSG9Q00887 426 aa3.14□□□□□ -1.91
SKP1-213ENST00000524288 LGALS9BQ3B8N2 356 aa3.14□□□□□ -1.91
SKP1-213ENST00000524288 LDLRAD2Q5SZI1 272 aa3.14□□□□□ -1.91
SKP1-213ENST00000524288 LGALS9CQ6DKI2 356 aa3.14□□□□□ -1.91
SKP1-213ENST00000524288 AMN1Q8IY45 258 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms