RNA–Protein interactions for RNA: ENST00000523867.5

HDAC9-227, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best)

Gene HDAC9, Length 2,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-227ENST00000523867 PCNX1Q96RV3 2341 aa5.65□□□□□ -1.5
HDAC9-227ENST00000523867 CEP295Q9C0D2 2601 aa5.65□□□□□ -1.5
HDAC9-227ENST00000523867 I3L2K1 104 aa5.65□□□□□ -1.51
HDAC9-227ENST00000523867 K7EM74 188 aa5.65□□□□□ -1.51
HDAC9-227ENST00000523867 CRYGAP11844 174 aa5.65□□□□□ -1.51
HDAC9-227ENST00000523867 TMEM75Q8N9X5 138 aa5.65□□□□□ -1.51
HDAC9-227ENST00000523867 C17orf77Q96MU5 243 aa5.65□□□□□ -1.51
HDAC9-227ENST00000523867 BUB1B-PAK6H3BSN5 160 aa5.64□□□□□ -1.51
HDAC9-227ENST00000523867 IGKV1-17P01599 117 aa5.64□□□□□ -1.51
HDAC9-227ENST00000523867 IGLV1-47P01700 117 aa5.64□□□□□ -1.51
HDAC9-227ENST00000523867 DEFB121Q5J5C9 76 aa5.64□□□□□ -1.51
HDAC9-227ENST00000523867 AMN1Q8IY45 258 aa5.64□□□□□ -1.51
HDAC9-227ENST00000523867 POM121L12Q8N7R1 296 aa5.64□□□□□ -1.51
HDAC9-227ENST00000523867 SHANK2-AS3Q9BTD1 123 aa5.64□□□□□ -1.51
HDAC9-227ENST00000523867 MRPL35Q9NZE8 188 aaKnown RBP5.64□□□□□ -1.51
HDAC9-227ENST00000523867 ABCA1O95477 2261 aa5.64□□□□□ -1.51
HDAC9-227ENST00000523867 ACACAQ13085 2346 aa5.64□□□□□ -1.51
HDAC9-227ENST00000523867 OOSP1A8MZH6 123 aa5.64□□□□□ -1.51
HDAC9-227ENST00000523867 H7C1H1 209 aa5.64□□□□□ -1.51
HDAC9-227ENST00000523867 K7EMT4 169 aa5.64□□□□□ -1.51
HDAC9-227ENST00000523867 COX7A1P24310 79 aa5.64□□□□□ -1.51
HDAC9-227ENST00000523867 NTN5Q8WTR8 489 aaPredicted RBP5.64□□□□□ -1.51
HDAC9-227ENST00000523867 EDA2RQ9HAV5 297 aa5.64□□□□□ -1.51
HDAC9-227ENST00000523867 ACYP1P07311 99 aa5.63□□□□□ -1.51
HDAC9-227ENST00000523867 CRIP1P50238 77 aa5.63□□□□□ -1.51
HDAC9-227ENST00000523867 LYPD1Q8N2G4 141 aa5.63□□□□□ -1.51
HDAC9-227ENST00000523867 PKDREJQ9NTG1 2253 aa5.63□□□□□ -1.51
HDAC9-227ENST00000523867 F8VRH5 84 aa5.63□□□□□ -1.51
HDAC9-227ENST00000523867 H3BMM0 161 aa5.63□□□□□ -1.51
HDAC9-227ENST00000523867 H3BRN7 92 aa5.63□□□□□ -1.51
HDAC9-227ENST00000523867 SRSF9Q13242 221 aaKnown RBP eCLIP5.63□□□□□ -1.51
HDAC9-227ENST00000523867 ATXN8Q156A1 80 aa5.63□□□□□ -1.51
HDAC9-227ENST00000523867 TMEM170BQ5T4T1 132 aa5.63□□□□□ -1.51
HDAC9-227ENST00000523867 SFTA2Q6UW10 78 aa5.63□□□□□ -1.51
HDAC9-227ENST00000523867 Q8N8P6 123 aa5.63□□□□□ -1.51
HDAC9-227ENST00000523867 UBE2WQ96B02 151 aa5.63□□□□□ -1.51
HDAC9-227ENST00000523867 PRO1854Q9UHT4 67 aa5.63□□□□□ -1.51
HDAC9-227ENST00000523867 TRBV10-2A0A0K0K1G8 114 aa5.62□□□□□ -1.51
HDAC9-227ENST00000523867 K7EIM0 57 aa5.62□□□□□ -1.51
HDAC9-227ENST00000523867 M0R3E3 92 aa5.62□□□□□ -1.51
HDAC9-227ENST00000523867 GAGE2AQ6NT46 116 aa5.62□□□□□ -1.51
HDAC9-227ENST00000523867 LYZL1Q6UWQ5 148 aa5.62□□□□□ -1.51
HDAC9-227ENST00000523867 TRPT1Q86TN4 253 aaKnown RBP5.62□□□□□ -1.51
HDAC9-227ENST00000523867 ZNF491Q8N8L2 437 aa5.62□□□□□ -1.51
HDAC9-227ENST00000523867 IGFBPL1Q8WX77 278 aa5.62□□□□□ -1.51
HDAC9-227ENST00000523867 E7EQL1 145 aa5.62□□□□□ -1.51
HDAC9-227ENST00000523867 COX7CP15954 63 aa5.62□□□□□ -1.51
HDAC9-227ENST00000523867 TMEM258P61165 79 aa5.62□□□□□ -1.51
HDAC9-227ENST00000523867 PMVKQ15126 192 aa5.62□□□□□ -1.51
HDAC9-227ENST00000523867 C8orf49Q96NF6 230 aa5.62□□□□□ -1.51
HDAC9-227ENST00000523867 RNF5Q99942 180 aa5.62□□□□□ -1.51
HDAC9-227ENST00000523867 ITPR1Q14643 2758 aa5.62□□□□□ -1.51
HDAC9-227ENST00000523867 AGRNO00468 2067 aa5.62□□□□□ -1.51
HDAC9-227ENST00000523867 RBAKDNA6NC62 111 aa5.61□□□□□ -1.51
HDAC9-227ENST00000523867 ZNF56Q15929 161 aa5.61□□□□□ -1.51
HDAC9-227ENST00000523867 MALRD1Q5VYJ5 2156 aa5.61□□□□□ -1.51
HDAC9-227ENST00000523867 C3orf56Q8N813 242 aa5.61□□□□□ -1.51
HDAC9-227ENST00000523867 LYNX1G3V0Z9 82 aa5.61□□□□□ -1.51
HDAC9-227ENST00000523867 CFC1BP0CG36 223 aa5.61□□□□□ -1.51
HDAC9-227ENST00000523867 CFC1P0CG37 223 aa5.61□□□□□ -1.51
HDAC9-227ENST00000523867 LYNX1P0DP58 116 aa5.61□□□□□ -1.51
HDAC9-227ENST00000523867 SLC25A16P16260 332 aa5.61□□□□□ -1.51
HDAC9-227ENST00000523867 CXCL5P42830 114 aa5.61□□□□□ -1.51
HDAC9-227ENST00000523867 S4R3C0 116 aa5.61□□□□□ -1.51
HDAC9-227ENST00000523867 IGF2RP11717 2491 aa5.61□□□□□ -1.51
HDAC9-227ENST00000523867 FAM236AA0A1B0GUQ0 79 aa5.61□□□□□ -1.51
HDAC9-227ENST00000523867 FAM236BA0A1B0GV22 79 aa5.61□□□□□ -1.51
HDAC9-227ENST00000523867 SMKR1H3BMG3 65 aa5.61□□□□□ -1.51
HDAC9-227ENST00000523867 H3BT86 120 aa5.61□□□□□ -1.51
HDAC9-227ENST00000523867 MRPS12O15235 138 aaKnown RBP5.61□□□□□ -1.51
HDAC9-227ENST00000523867 COX8CQ7Z4L0 72 aa5.61□□□□□ -1.51
HDAC9-227ENST00000523867 TACC2O95359 2948 aa5.6□□□□□ -1.51
HDAC9-227ENST00000523867 IGLV2-18A0A075B6J9 118 aa5.6□□□□□ -1.51
HDAC9-227ENST00000523867 TRGV11A0A075B6L2 103 aa5.6□□□□□ -1.51
HDAC9-227ENST00000523867 ZNF815PA8K554 130 aa5.6□□□□□ -1.51
HDAC9-227ENST00000523867 SH2D1AO60880 128 aa5.6□□□□□ -1.51
HDAC9-227ENST00000523867 COX6B1P14854 86 aa5.6□□□□□ -1.51
HDAC9-227ENST00000523867 PDE6HQ13956 83 aa5.6□□□□□ -1.51
HDAC9-227ENST00000523867 GFRALQ6UXV0 394 aa5.6□□□□□ -1.51
HDAC9-227ENST00000523867 SCGB1D4Q6XE38 83 aa5.6□□□□□ -1.51
HDAC9-227ENST00000523867 DPH3Q96FX2 82 aa5.6□□□□□ -1.51
HDAC9-227ENST00000523867 LY6LH3BQJ8 138 aa5.6□□□□□ -1.51
HDAC9-227ENST00000523867 K7ENP7 123 aa5.6□□□□□ -1.51
HDAC9-227ENST00000523867 PRYO14603 147 aa5.6□□□□□ -1.51
HDAC9-227ENST00000523867 OVOL1O14753 267 aa5.6□□□□□ -1.51
HDAC9-227ENST00000523867 NDUFA3O95167 84 aa5.6□□□□□ -1.51
HDAC9-227ENST00000523867 TRACP01848 142 aa5.6□□□□□ -1.51
HDAC9-227ENST00000523867 EFNA4P52798 201 aa5.6□□□□□ -1.51
HDAC9-227ENST00000523867 LAGE3Q14657 143 aa5.6□□□□□ -1.51
HDAC9-227ENST00000523867 RNF185Q96GF1 192 aa5.6□□□□□ -1.51
HDAC9-227ENST00000523867 CNFNQ9BYD5 112 aa5.6□□□□□ -1.51
HDAC9-227ENST00000523867 RELNP78509 3460 aa5.59□□□□□ -1.51
HDAC9-227ENST00000523867 APC2O95996 2303 aa5.59□□□□□ -1.51
HDAC9-227ENST00000523867 TEX49A0A1B0GTD5 131 aa5.59□□□□□ -1.51
HDAC9-227ENST00000523867 IGHV3-30P01768 117 aa5.59□□□□□ -1.51
HDAC9-227ENST00000523867 PRB1P04280 392 aa5.59□□□□□ -1.51
HDAC9-227ENST00000523867 IGHV3-30-5P0DP03 117 aa5.59□□□□□ -1.51
HDAC9-227ENST00000523867 ZNF672Q499Z4 452 aaPredicted RBP5.59□□□□□ -1.51
HDAC9-227ENST00000523867 SPTA1P02549 2419 aa5.59□□□□□ -1.51
HDAC9-227ENST00000523867 ZZEF1O43149 2961 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms