RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 SFRP2Q96HF1 295 aa14.64□□□□□ -0.07
PVT1-218ENST00000523328 UBE2D3P61077 147 aa14.63□□□□□ -0.07
PVT1-218ENST00000523328 UBE2D2P62837 147 aa14.63□□□□□ -0.07
PVT1-218ENST00000523328 OR11H4Q8NGC9 324 aa14.63□□□□□ -0.07
PVT1-218ENST00000523328 TMEM167BQ9NRX6 74 aa14.63□□□□□ -0.07
PVT1-218ENST00000523328 TRBV10-1A0A0K0K1A3 114 aa14.62□□□□□ -0.07
PVT1-218ENST00000523328 KRBOX1C9JBD0 128 aa14.62□□□□□ -0.07
PVT1-218ENST00000523328 USP17L23D6RBM5 183 aa14.62□□□□□ -0.07
PVT1-218ENST00000523328 CRIP1P50238 77 aa14.62□□□□□ -0.07
PVT1-218ENST00000523328 LINC00299Q6ZSB3 139 aa14.62□□□□□ -0.07
PVT1-218ENST00000523328 HSD17B11Q8NBQ5 300 aa14.62□□□□□ -0.07
PVT1-218ENST00000523328 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.62□□□□□ -0.07
PVT1-218ENST00000523328 SSNA1O43805 119 aa14.61□□□□□ -0.07
PVT1-218ENST00000523328 CXorf1O96002 111 aa14.61□□□□□ -0.07
PVT1-218ENST00000523328 PRSS1P07477 247 aa14.61□□□□□ -0.07
PVT1-218ENST00000523328 RPL36AP83881 106 aaKnown RBP14.61□□□□□ -0.07
PVT1-218ENST00000523328 IFITM3Q01628 133 aa14.61□□□□□ -0.07
PVT1-218ENST00000523328 RPL36ALQ969Q0 106 aaKnown RBP14.61□□□□□ -0.07
PVT1-218ENST00000523328 MARVELD1Q9BSK0 173 aa14.61□□□□□ -0.07
PVT1-218ENST00000523328 PSMG3Q9BT73 122 aaPredicted RBP14.61□□□□□ -0.07
PVT1-218ENST00000523328 NDUFA13Q9P0J0 144 aa14.61□□□□□ -0.07
PVT1-218ENST00000523328 TRBV7-3A0A075B6L6 115 aa14.6□□□□□ -0.07
PVT1-218ENST00000523328 A0A1W2PRE2 83 aa14.6□□□□□ -0.07
PVT1-218ENST00000523328 TMEM262E9PQX1 116 aa14.6□□□□□ -0.07
PVT1-218ENST00000523328 PANO1I0J062 215 aa14.6□□□□□ -0.07
PVT1-218ENST00000523328 M0R036 132 aa14.6□□□□□ -0.07
PVT1-218ENST00000523328 UPK1BO75841 260 aa14.6□□□□□ -0.07
PVT1-218ENST00000523328 MPV17L2Q567V2 206 aa14.6□□□□□ -0.07
PVT1-218ENST00000523328 C15orf54Q8N8G6 183 aa14.6□□□□□ -0.07
PVT1-218ENST00000523328 C9orf163Q8N9P6 203 aa14.6□□□□□ -0.07
PVT1-218ENST00000523328 S100ZQ8WXG8 99 aa14.6□□□□□ -0.07
PVT1-218ENST00000523328 RNF213Q63HN8 5207 aa14.59□□□□□ -0.07
PVT1-218ENST00000523328 LRP2P98164 4655 aa14.59□□□□□ -0.07
PVT1-218ENST00000523328 TRBV6-8A0A0A6YYG3 113 aa14.59□□□□□ -0.07
PVT1-218ENST00000523328 GRIFINA4D1Z8 144 aa14.59□□□□□ -0.07
PVT1-218ENST00000523328 HLA-DQA1P01909 254 aa14.59□□□□□ -0.07
PVT1-218ENST00000523328 CRPP02741 224 aa14.59□□□□□ -0.07
PVT1-218ENST00000523328 DGAT2L7PQ6IED9 249 aa14.59□□□□□ -0.07
PVT1-218ENST00000523328 Q86TA4 180 aa14.59□□□□□ -0.07
PVT1-218ENST00000523328 ATP6V0CP27449 155 aa14.58□□□□□ -0.08
PVT1-218ENST00000523328 OR10G8Q8NGN5 311 aa14.58□□□□□ -0.08
PVT1-218ENST00000523328 ZC2HC1AQ96GY0 325 aa14.58□□□□□ -0.08
PVT1-218ENST00000523328 PHLDA3Q9Y5J5 127 aa14.58□□□□□ -0.08
PVT1-218ENST00000523328 M0R381 172 aa14.57□□□□□ -0.08
PVT1-218ENST00000523328 MBP02144 154 aa14.57□□□□□ -0.08
PVT1-218ENST00000523328 SERF2P84101 59 aa14.57□□□□□ -0.08
PVT1-218ENST00000523328 Q6ZRU5 148 aa14.57□□□□□ -0.08
PVT1-218ENST00000523328 SH2D1AO60880 128 aa14.56□□□□□ -0.08
PVT1-218ENST00000523328 ANGP03950 147 aaKnown RBP14.56□□□□□ -0.08
PVT1-218ENST00000523328 COX8CQ7Z4L0 72 aa14.56□□□□□ -0.08
PVT1-218ENST00000523328 ACTR3CQ9C0K3 210 aaPredicted RBP14.56□□□□□ -0.08
PVT1-218ENST00000523328 TNXBP22105 4242 aa14.55□□□□□ -0.08
PVT1-218ENST00000523328 PEX7O00628 323 aa14.55□□□□□ -0.08
PVT1-218ENST00000523328 IFNA7P01567 189 aa14.55□□□□□ -0.08
PVT1-218ENST00000523328 TPT1P13693 172 aaKnown RBP14.55□□□□□ -0.08
PVT1-218ENST00000523328 SDIM1Q6ZPB5 146 aa14.55□□□□□ -0.08
PVT1-218ENST00000523328 MIAQ16674 131 aa14.54□□□□□ -0.08
PVT1-218ENST00000523328 KRTAP26-1Q6PEX3 210 aa14.54□□□□□ -0.08
PVT1-218ENST00000523328 ZFP82Q8N141 532 aa14.54□□□□□ -0.08
PVT1-218ENST00000523328 TNFSF18Q9UNG2 199 aa14.54□□□□□ -0.08
PVT1-218ENST00000523328 LINC01559Q495D7 138 aa14.53□□□□□ -0.08
PVT1-218ENST00000523328 NEXN-AS1Q8NBZ9 246 aa14.53□□□□□ -0.08
PVT1-218ENST00000523328 TMSB15BA0A087X1C1 80 aa14.52□□□□□ -0.09
PVT1-218ENST00000523328 UBE2G2P60604 165 aa14.52□□□□□ -0.09
PVT1-218ENST00000523328 RPL19P84098 196 aaKnown RBP14.52□□□□□ -0.09
PVT1-218ENST00000523328 FAM162BQ5T6X4 162 aa14.52□□□□□ -0.09
PVT1-218ENST00000523328 PRR34Q9NV39 138 aa14.52□□□□□ -0.09
PVT1-218ENST00000523328 ZFP30Q9Y2G7 519 aa14.52□□□□□ -0.09
PVT1-218ENST00000523328 PTTG1O95997 202 aa14.51□□□□□ -0.09
PVT1-218ENST00000523328 CIRBPQ14011 172 aaKnown RBP14.51□□□□□ -0.09
PVT1-218ENST00000523328 ZNF726P1Q15940 193 aa14.51□□□□□ -0.09
PVT1-218ENST00000523328 ZNF674Q2M3X9 581 aa14.51□□□□□ -0.09
PVT1-218ENST00000523328 PRR27Q6MZM9 219 aa14.51□□□□□ -0.09
PVT1-218ENST00000523328 HIST1H2BAQ96A08 127 aa14.51□□□□□ -0.09
PVT1-218ENST00000523328 A0A0D9SG52 128 aa14.5□□□□□ -0.09
PVT1-218ENST00000523328 RAB4BP61018 213 aa14.5□□□□□ -0.09
PVT1-218ENST00000523328 AQP10Q96PS8 301 aa14.5□□□□□ -0.09
PVT1-218ENST00000523328 CHCHD5Q9BSY4 110 aa14.5□□□□□ -0.09
PVT1-218ENST00000523328 FAM74A7A6NL05 159 aa14.49□□□□□ -0.09
PVT1-218ENST00000523328 NTM-AS1Q6ZSK4 140 aa14.49□□□□□ -0.09
PVT1-218ENST00000523328 PKIAP61925 76 aa14.48□□□□□ -0.09
PVT1-218ENST00000523328 CLPSL2Q6UWE3 100 aa14.48□□□□□ -0.09
PVT1-218ENST00000523328 NKX6-2Q9C056 277 aaPredicted RBP14.48□□□□□ -0.09
PVT1-218ENST00000523328 CTXND1A0A1B0GTU2 59 aa14.47□□□□□ -0.09
PVT1-218ENST00000523328 ZNF56Q15929 161 aa14.47□□□□□ -0.09
PVT1-218ENST00000523328 RBX1P62877 108 aa14.46□□□□□ -0.09
PVT1-218ENST00000523328 LINC00269Q8N2A0 174 aa14.46□□□□□ -0.09
PVT1-218ENST00000523328 CLRN3Q8NCR9 226 aa14.46□□□□□ -0.09
PVT1-218ENST00000523328 FMC1Q96HJ9 113 aa14.46□□□□□ -0.09
PVT1-218ENST00000523328 CNBPP62633 177 aaKnown RBP14.45□□□□□ -0.1
PVT1-218ENST00000523328 LTAP01374 205 aa14.44□□□□□ -0.1
PVT1-218ENST00000523328 UBE2G1P62253 170 aa14.44□□□□□ -0.1
PVT1-218ENST00000523328 OR10AG1Q8NH19 301 aa14.44□□□□□ -0.1
PVT1-218ENST00000523328 VAX2Q9UIW0 290 aa14.44□□□□□ -0.1
PVT1-218ENST00000523328 TRBV6-1A0A0K0K1D8 114 aa14.43□□□□□ -0.1
PVT1-218ENST00000523328 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.43□□□□□ -0.1
PVT1-218ENST00000523328 GAGE6Q13070 117 aa14.42□□□□□ -0.1
PVT1-218ENST00000523328 TMEM97Q5BJF2 176 aa14.42□□□□□ -0.1
PVT1-218ENST00000523328 RPL7L1Q6DKI1 246 aaKnown RBP14.42□□□□□ -0.1
PVT1-218ENST00000523328 A0A087WYN8 130 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms