RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 Q8N3U1 123 aa12.55□□□□□ -0.4
SPIDR-220ENST00000522900 SYT8Q8NBV8 401 aa12.55□□□□□ -0.4
SPIDR-220ENST00000522900 M0R381 172 aa12.54□□□□□ -0.4
SPIDR-220ENST00000522900 FAM74A4Q5TZK3 123 aa12.54□□□□□ -0.4
SPIDR-220ENST00000522900 SFRP2Q96HF1 295 aa12.54□□□□□ -0.4
SPIDR-220ENST00000522900 MLST8Q9BVC4 326 aa12.54□□□□□ -0.4
SPIDR-220ENST00000522900 PHLDA3Q9Y5J5 127 aa12.54□□□□□ -0.4
SPIDR-220ENST00000522900 S100A9P06702 114 aaKnown RBP12.53□□□□□ -0.4
SPIDR-220ENST00000522900 TPT1P13693 172 aaKnown RBP12.53□□□□□ -0.4
SPIDR-220ENST00000522900 EIF5AP63241 154 aaKnown RBP12.53□□□□□ -0.4
SPIDR-220ENST00000522900 RPL19P84098 196 aaKnown RBP12.53□□□□□ -0.4
SPIDR-220ENST00000522900 BAGE2Q86Y30 109 aa12.53□□□□□ -0.4
SPIDR-220ENST00000522900 Q9HAA7 133 aa12.52□□□□□ -0.41
SPIDR-220ENST00000522900 RHODO00212 210 aa12.51□□□□□ -0.41
SPIDR-220ENST00000522900 Q8N1X5 172 aa12.51□□□□□ -0.41
SPIDR-220ENST00000522900 LRCOL1A6NCL2 159 aa12.5□□□□□ -0.41
SPIDR-220ENST00000522900 KRTAP10-1P60331 282 aa12.5□□□□□ -0.41
SPIDR-220ENST00000522900 CDPF1Q6NVV7 123 aa12.5□□□□□ -0.41
SPIDR-220ENST00000522900 ZFP82Q8N141 532 aa12.5□□□□□ -0.41
SPIDR-220ENST00000522900 GNG13Q9P2W3 67 aa12.5□□□□□ -0.41
SPIDR-220ENST00000522900 PSCAO43653 123 aa12.49□□□□□ -0.41
SPIDR-220ENST00000522900 PRR27Q6MZM9 219 aa12.49□□□□□ -0.41
SPIDR-220ENST00000522900 DERL1Q9BUN8 251 aa12.49□□□□□ -0.41
SPIDR-220ENST00000522900 BOLA1Q9Y3E2 137 aa12.49□□□□□ -0.41
SPIDR-220ENST00000522900 MUC21A0A0G2JKD1 596 aa12.48□□□□□ -0.41
SPIDR-220ENST00000522900 MUC21A0A140T8X8 626 aa12.48□□□□□ -0.41
SPIDR-220ENST00000522900 RPL35P42766 123 aaKnown RBP12.48□□□□□ -0.41
SPIDR-220ENST00000522900 OR10AG1Q8NH19 301 aa12.48□□□□□ -0.41
SPIDR-220ENST00000522900 TRAV1-1A0A0B4J248 108 aa12.47□□□□□ -0.41
SPIDR-220ENST00000522900 XGP55808 180 aa12.47□□□□□ -0.41
SPIDR-220ENST00000522900 DAZ4Q86SG3 579 aaKnown RBP12.47□□□□□ -0.41
SPIDR-220ENST00000522900 DAZ3Q9NR90 486 aaKnown RBP12.47□□□□□ -0.41
SPIDR-220ENST00000522900 TCTE3Q8IZS6 198 aa12.46□□□□□ -0.41
SPIDR-220ENST00000522900 C11orf52Q96A22 123 aa12.46□□□□□ -0.41
SPIDR-220ENST00000522900 SSBP4Q9BWG4 385 aaPredicted RBP12.46□□□□□ -0.41
SPIDR-220ENST00000522900 MANBALQ9NQG1 85 aa12.46□□□□□ -0.41
SPIDR-220ENST00000522900 A0A087WWC5 75 aa12.45□□□□□ -0.42
SPIDR-220ENST00000522900 SNAI2O43623 268 aa12.45□□□□□ -0.42
SPIDR-220ENST00000522900 CXCL1P09341 107 aa12.45□□□□□ -0.42
SPIDR-220ENST00000522900 SULT1A2P50226 295 aa12.45□□□□□ -0.42
SPIDR-220ENST00000522900 RAB5CP51148 216 aa12.45□□□□□ -0.42
SPIDR-220ENST00000522900 SSTP61278 116 aa12.45□□□□□ -0.42
SPIDR-220ENST00000522900 IGLV2-8P01709 118 aa12.44□□□□□ -0.42
SPIDR-220ENST00000522900 GCSHP23434 173 aa12.44□□□□□ -0.42
SPIDR-220ENST00000522900 LAGE3Q14657 143 aa12.44□□□□□ -0.42
SPIDR-220ENST00000522900 EIF5AL1Q6IS14 154 aaKnown RBP12.44□□□□□ -0.42
SPIDR-220ENST00000522900 RAB19A4D1S5 217 aa12.43□□□□□ -0.42
SPIDR-220ENST00000522900 OR5AL1P0C617 328 aa12.43□□□□□ -0.42
SPIDR-220ENST00000522900 UBE2D3P61077 147 aa12.43□□□□□ -0.42
SPIDR-220ENST00000522900 UBE2D2P62837 147 aa12.43□□□□□ -0.42
SPIDR-220ENST00000522900 WFDC2Q14508 124 aa12.43□□□□□ -0.42
SPIDR-220ENST00000522900 Q6ZNX1 250 aa12.43□□□□□ -0.42
SPIDR-220ENST00000522900 TRBV10-1A0A0K0K1A3 114 aa12.42□□□□□ -0.42
SPIDR-220ENST00000522900 C1QBP02746 253 aa12.42□□□□□ -0.42
SPIDR-220ENST00000522900 RAB4BP61018 213 aa12.42□□□□□ -0.42
SPIDR-220ENST00000522900 RPL36AP83881 106 aaKnown RBP12.42□□□□□ -0.42
SPIDR-220ENST00000522900 CENPWQ5EE01 88 aa12.42□□□□□ -0.42
SPIDR-220ENST00000522900 NIT1Q86X76 327 aa12.42□□□□□ -0.42
SPIDR-220ENST00000522900 Q8N814 137 aa12.42□□□□□ -0.42
SPIDR-220ENST00000522900 RPL36ALQ969Q0 106 aaKnown RBP12.42□□□□□ -0.42
SPIDR-220ENST00000522900 DNAJC30Q96LL9 226 aa12.42□□□□□ -0.42
SPIDR-220ENST00000522900 TRBV7-3A0A075B6L6 115 aa12.41□□□□□ -0.42
SPIDR-220ENST00000522900 IGLV5-52A0A0A0MRZ9 124 aa12.41□□□□□ -0.42
SPIDR-220ENST00000522900 GZMBP10144 247 aa12.41□□□□□ -0.42
SPIDR-220ENST00000522900 ZNF56Q15929 161 aa12.41□□□□□ -0.42
SPIDR-220ENST00000522900 SPANXN1Q5VSR9 72 aa12.41□□□□□ -0.42
SPIDR-220ENST00000522900 SLC51BQ86UW2 128 aa12.4□□□□□ -0.42
SPIDR-220ENST00000522900 NEXN-AS1Q8NBZ9 246 aa12.4□□□□□ -0.42
SPIDR-220ENST00000522900 OR10G8Q8NGN5 311 aa12.4□□□□□ -0.42
SPIDR-220ENST00000522900 TM2D2Q9BX73 214 aa12.4□□□□□ -0.42
SPIDR-220ENST00000522900 KIF25-AS1Q9Y6Z4 181 aa12.4□□□□□ -0.42
SPIDR-220ENST00000522900 TRAV8-3A0A0A6YYJ7 113 aa12.39□□□□□ -0.43
SPIDR-220ENST00000522900 C19orf71A6NCJ1 209 aa12.39□□□□□ -0.43
SPIDR-220ENST00000522900 RBFOX3A6NFN3 312 aa12.39□□□□□ -0.43
SPIDR-220ENST00000522900 TEX46H3BTG2 121 aa12.39□□□□□ -0.43
SPIDR-220ENST00000522900 MEF2BQ02080 365 aaPredicted RBP12.39□□□□□ -0.43
SPIDR-220ENST00000522900 KLK12Q9UKR0 248 aa12.39□□□□□ -0.43
SPIDR-220ENST00000522900 TRBV20OR9-2A0A075B6H5 130 aa12.38□□□□□ -0.43
SPIDR-220ENST00000522900 LECT2O14960 151 aa12.38□□□□□ -0.43
SPIDR-220ENST00000522900 HAMPP81172 84 aa12.38□□□□□ -0.43
SPIDR-220ENST00000522900 NTN5Q8WTR8 489 aaPredicted RBP12.38□□□□□ -0.43
SPIDR-220ENST00000522900 MED9Q9NWA0 146 aa12.38□□□□□ -0.43
SPIDR-220ENST00000522900 URGCP-MRPS24S4R325 110 aa12.38□□□□□ -0.43
SPIDR-220ENST00000522900 F5H697 171 aa12.37□□□□□ -0.43
SPIDR-220ENST00000522900 PDE6DO43924 150 aa12.37□□□□□ -0.43
SPIDR-220ENST00000522900 BCL2P10415 239 aa12.37□□□□□ -0.43
SPIDR-220ENST00000522900 GNG4P50150 75 aa12.37□□□□□ -0.43
SPIDR-220ENST00000522900 TOR2AQ5JU69 321 aa12.37□□□□□ -0.43
SPIDR-220ENST00000522900 OR2D3Q8NGH3 330 aa12.37□□□□□ -0.43
SPIDR-220ENST00000522900 DAZAP1Q96EP5 407 aaKnown RBP12.37□□□□□ -0.43
SPIDR-220ENST00000522900 TPPP3Q9BW30 176 aa12.37□□□□□ -0.43
SPIDR-220ENST00000522900 hCG_2014768A0A024R1R8 64 aa12.36□□□□□ -0.43
SPIDR-220ENST00000522900 IGLC6P0CF74 106 aa12.36□□□□□ -0.43
SPIDR-220ENST00000522900 C9orf62Q8N4C0 152 aa12.36□□□□□ -0.43
SPIDR-220ENST00000522900 BAALCQ8WXS3 180 aa12.36□□□□□ -0.43
SPIDR-220ENST00000522900 A0A087WX48 190 aa12.35□□□□□ -0.43
SPIDR-220ENST00000522900 TRBV6-8A0A0A6YYG3 113 aa12.35□□□□□ -0.43
SPIDR-220ENST00000522900 EPM2AB3EWF7 344 aa12.35□□□□□ -0.43
SPIDR-220ENST00000522900 IFNA1P01562 189 aa12.35□□□□□ -0.43
SPIDR-220ENST00000522900 SMR3BP02814 79 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms