RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 UHRF1BP1LA0JNW5 1464 aa0.31□□□□□ -2.36
SKP1-207ENST00000520417 ERCC6Q03468 1493 aa0.31□□□□□ -2.36
SKP1-207ENST00000520417 A0A096LNT2 108 aa0.31□□□□□ -2.36
SKP1-207ENST00000520417 TRBV7-1A0A0A6YYK4 115 aa0.31□□□□□ -2.36
SKP1-207ENST00000520417 MCRIP1C9JLW8 97 aa0.31□□□□□ -2.36
SKP1-207ENST00000520417 PIPP12273 146 aaPredicted RBP0.31□□□□□ -2.36
SKP1-207ENST00000520417 NPC2P61916 151 aa0.31□□□□□ -2.36
SKP1-207ENST00000520417 UBE2G1P62253 170 aa0.31□□□□□ -2.36
SKP1-207ENST00000520417 SPANXN1Q5VSR9 72 aa0.31□□□□□ -2.36
SKP1-207ENST00000520417 VMO1Q7Z5L0 202 aa0.31□□□□□ -2.36
SKP1-207ENST00000520417 VSTM2AQ8TAG5 236 aa0.31□□□□□ -2.36
SKP1-207ENST00000520417 COX7B2Q8TF08 81 aa0.31□□□□□ -2.36
SKP1-207ENST00000520417 PFDN5Q99471 154 aa0.31□□□□□ -2.36
SKP1-207ENST00000520417 TMEM242Q9NWH2 141 aa0.31□□□□□ -2.36
SKP1-207ENST00000520417 V9GYV3 84 aa0.31□□□□□ -2.36
SKP1-207ENST00000520417 DOCK11Q5JSL3 2073 aa0.31□□□□□ -2.36
SKP1-207ENST00000520417 SOGA1O94964 1423 aa0.3□□□□□ -2.36
SKP1-207ENST00000520417 BCORL1Q5H9F3 1711 aa0.3□□□□□ -2.36
SKP1-207ENST00000520417 CDK12Q9NYV4 1490 aaPredicted RBP0.3□□□□□ -2.36
SKP1-207ENST00000520417 NPFFO15130 113 aa0.3□□□□□ -2.36
SKP1-207ENST00000520417 NCR2O95944 276 aa0.3□□□□□ -2.36
SKP1-207ENST00000520417 TSPAN19P0C672 248 aa0.3□□□□□ -2.36
SKP1-207ENST00000520417 C9orf116Q5BN46 136 aaPredicted RBP0.3□□□□□ -2.36
SKP1-207ENST00000520417 S100A7L2Q5SY68 101 aa0.3□□□□□ -2.36
SKP1-207ENST00000520417 SPTSSBQ8NFR3 76 aa0.3□□□□□ -2.36
SKP1-207ENST00000520417 MYH13Q9UKX3 1938 aa0.3□□□□□ -2.36
SKP1-207ENST00000520417 JMJD1CQ15652 2540 aa0.3□□□□□ -2.36
SKP1-207ENST00000520417 BLMP54132 1417 aaPredicted RBP0.3□□□□□ -2.36
SKP1-207ENST00000520417 CASZ1Q86V15 1759 aa0.29□□□□□ -2.36
SKP1-207ENST00000520417 KIAA0100Q14667 2235 aaKnown RBP0.29□□□□□ -2.36
SKP1-207ENST00000520417 ACYP2P14621 99 aa0.29□□□□□ -2.36
SKP1-207ENST00000520417 CCL3L1P16619 93 aa0.29□□□□□ -2.36
SKP1-207ENST00000520417 GUCA1AP43080 201 aaPredicted RBP0.29□□□□□ -2.36
SKP1-207ENST00000520417 RPS25P62851 125 aaKnown RBP0.29□□□□□ -2.36
SKP1-207ENST00000520417 CCDC58Q4VC31 144 aa0.29□□□□□ -2.36
SKP1-207ENST00000520417 SLC48A1Q6P1K1 146 aa0.29□□□□□ -2.36
SKP1-207ENST00000520417 Q6ZUT4 128 aa0.29□□□□□ -2.36
SKP1-207ENST00000520417 SPTSSAQ969W0 71 aa0.29□□□□□ -2.36
SKP1-207ENST00000520417 TCEAL4Q96EI5 215 aa0.29□□□□□ -2.36
SKP1-207ENST00000520417 DLEC1Q9Y238 1755 aa0.29□□□□□ -2.36
SKP1-207ENST00000520417 DSTQ03001 7570 aaKnown RBP0.29□□□□□ -2.36
SKP1-207ENST00000520417 CHD9Q3L8U1 2897 aa0.28□□□□□ -2.36
SKP1-207ENST00000520417 RREB1Q92766 1687 aa0.28□□□□□ -2.36
SKP1-207ENST00000520417 RBBP6Q7Z6E9 1792 aaKnown RBP0.28□□□□□ -2.36
SKP1-207ENST00000520417 FAM92AA1XBS5 289 aa0.28□□□□□ -2.36
SKP1-207ENST00000520417 PITX3O75364 302 aa0.28□□□□□ -2.36
SKP1-207ENST00000520417 NDUFB6O95139 128 aa0.28□□□□□ -2.36
SKP1-207ENST00000520417 IFNA17P01571 189 aa0.28□□□□□ -2.36
SKP1-207ENST00000520417 APODP05090 189 aa0.28□□□□□ -2.36
SKP1-207ENST00000520417 SCIMPQ6UWF3 145 aa0.28□□□□□ -2.36
SKP1-207ENST00000520417 BPESC1Q9GZL8 116 aa0.28□□□□□ -2.36
SKP1-207ENST00000520417 KIF13AQ9H1H9 1805 aa0.28□□□□□ -2.36
SKP1-207ENST00000520417 KCPQ6ZWJ8 1503 aa0.28□□□□□ -2.37
SKP1-207ENST00000520417 KDM5CP41229 1560 aa0.28□□□□□ -2.37
SKP1-207ENST00000520417 TPRP12270 2363 aaKnown RBP0.27□□□□□ -2.37
SKP1-207ENST00000520417 SYNE1Q8NF91 8797 aaKnown RBP0.27□□□□□ -2.37
SKP1-207ENST00000520417 IGF2RP11717 2491 aa0.27□□□□□ -2.37
SKP1-207ENST00000520417 TRGV1A0A0A0MS02 117 aa0.27□□□□□ -2.37
SKP1-207ENST00000520417 KRTAP2-3P0C7H8 128 aa0.27□□□□□ -2.37
SKP1-207ENST00000520417 SMIM6P0DI80 62 aa0.27□□□□□ -2.37
SKP1-207ENST00000520417 CBLN1P23435 193 aa0.27□□□□□ -2.37
SKP1-207ENST00000520417 EDDM3BP56851 147 aa0.27□□□□□ -2.37
SKP1-207ENST00000520417 ARPC4P59998 168 aa0.27□□□□□ -2.37
SKP1-207ENST00000520417 COX6A2Q02221 97 aa0.27□□□□□ -2.37
SKP1-207ENST00000520417 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.27□□□□□ -2.37
SKP1-207ENST00000520417 SMIM11BQ8TCY0 68 aa0.27□□□□□ -2.37
SKP1-207ENST00000520417 KRTAP2-4Q9BYR9 128 aa0.27□□□□□ -2.37
SKP1-207ENST00000520417 KRTAP2-1Q9BYU5 128 aa0.27□□□□□ -2.37
SKP1-207ENST00000520417 PROK2Q9HC23 129 aa0.27□□□□□ -2.37
SKP1-207ENST00000520417 PAIP2BQ9ULR5 123 aaKnown RBP0.27□□□□□ -2.37
SKP1-207ENST00000520417 F5P12259 2224 aa0.27□□□□□ -2.37
SKP1-207ENST00000520417 CADP27708 2225 aa0.27□□□□□ -2.37
SKP1-207ENST00000520417 ANKRD17O75179 2603 aaKnown RBP0.27□□□□□ -2.37
SKP1-207ENST00000520417 ABCA12Q86UK0 2595 aa0.26□□□□□ -2.37
SKP1-207ENST00000520417 MAST4O15021 2626 aa0.26□□□□□ -2.37
SKP1-207ENST00000520417 GVQW2A0A096LPI5 108 aaPredicted RBP0.26□□□□□ -2.37
SKP1-207ENST00000520417 FAM25AB3EWG3 89 aa0.26□□□□□ -2.37
SKP1-207ENST00000520417 FAM25CB3EWG5 89 aa0.26□□□□□ -2.37
SKP1-207ENST00000520417 FAM25GB3EWG6 89 aa0.26□□□□□ -2.37
SKP1-207ENST00000520417 SPINK1P00995 79 aa0.26□□□□□ -2.37
SKP1-207ENST00000520417 NMBP08949 121 aa0.26□□□□□ -2.37
SKP1-207ENST00000520417 HIST1H1DP16402 221 aaKnown RBP0.26□□□□□ -2.37
SKP1-207ENST00000520417 GCHFRP30047 84 aa0.26□□□□□ -2.37
SKP1-207ENST00000520417 Q6ZRX8 168 aa0.26□□□□□ -2.37
SKP1-207ENST00000520417 C10orf82Q8WW14 230 aa0.26□□□□□ -2.37
SKP1-207ENST00000520417 Q96NJ1 140 aa0.26□□□□□ -2.37
SKP1-207ENST00000520417 SDF2Q99470 211 aa0.26□□□□□ -2.37
SKP1-207ENST00000520417 SEC11CQ9BY50 192 aa0.26□□□□□ -2.37
SKP1-207ENST00000520417 FAM107BQ9H098 131 aa0.26□□□□□ -2.37
SKP1-207ENST00000520417 TMEM191AQ9H0A3 160 aa0.26□□□□□ -2.37
SKP1-207ENST00000520417 CCDC167Q9P0B6 97 aa0.26□□□□□ -2.37
SKP1-207ENST00000520417 UNC13AQ9UPW8 1703 aa0.26□□□□□ -2.37
SKP1-207ENST00000520417 TANC1Q9C0D5 1861 aa0.26□□□□□ -2.37
SKP1-207ENST00000520417 MYH6P13533 1939 aa0.26□□□□□ -2.37
SKP1-207ENST00000520417 TTC28Q96AY4 2481 aa0.25□□□□□ -2.37
SKP1-207ENST00000520417 F8P00451 2351 aa0.25□□□□□ -2.37
SKP1-207ENST00000520417 FHAD1B1AJZ9 1412 aa0.25□□□□□ -2.37
SKP1-207ENST00000520417 A0A087WTM6 91 aa0.25□□□□□ -2.37
SKP1-207ENST00000520417 PIGBOS1A0A0B4J2F0 54 aa0.25□□□□□ -2.37
SKP1-207ENST00000520417 SELENOWP63302 87 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms