RNA–Protein interactions for RNA: ENST00000519894.1

FBXO28-204, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-204ENST00000519894 CCL20P78556 96 aa10.1□□□□□ -0.79
FBXO28-204ENST00000519894 NFE4Q86UQ8 179 aa10.1□□□□□ -0.79
FBXO28-204ENST00000519894 SCRT2Q9NQ03 307 aa10.1□□□□□ -0.79
FBXO28-204ENST00000519894 IGHV3-38A0A0C4DH36 116 aa10.09□□□□□ -0.79
FBXO28-204ENST00000519894 CRYGDP07320 174 aa10.09□□□□□ -0.79
FBXO28-204ENST00000519894 SYT8Q8NBV8 401 aa10.09□□□□□ -0.79
FBXO28-204ENST00000519894 ATP6V0E2Q8NHE4 81 aa10.09□□□□□ -0.79
FBXO28-204ENST00000519894 MLST8Q9BVC4 326 aa10.09□□□□□ -0.79
FBXO28-204ENST00000519894 MSRB1Q9NZV6 116 aa10.09□□□□□ -0.79
FBXO28-204ENST00000519894 Q9UF83 564 aa10.09□□□□□ -0.79
FBXO28-204ENST00000519894 DNAH5Q8TE73 4624 aa10.09□□□□□ -0.79
FBXO28-204ENST00000519894 LINC00694P0DN24 101 aa10.08□□□□□ -0.8
FBXO28-204ENST00000519894 LELP1Q5T871 98 aa10.08□□□□□ -0.8
FBXO28-204ENST00000519894 BAGE2Q86Y30 109 aa10.08□□□□□ -0.8
FBXO28-204ENST00000519894 C14orf178Q8N769 122 aaPredicted RBP10.08□□□□□ -0.8
FBXO28-204ENST00000519894 GTSF1LQ9H1H1 148 aa10.08□□□□□ -0.8
FBXO28-204ENST00000519894 PHLDA3Q9Y5J5 127 aa10.08□□□□□ -0.8
FBXO28-204ENST00000519894 TRAV1-1A0A0B4J248 108 aa10.07□□□□□ -0.8
FBXO28-204ENST00000519894 TRAV8-6A0A0B4J262 113 aa10.07□□□□□ -0.8
FBXO28-204ENST00000519894 GAGE12JA6NER3 117 aa10.07□□□□□ -0.8
FBXO28-204ENST00000519894 SULT1A2P50226 295 aa10.07□□□□□ -0.8
FBXO28-204ENST00000519894 RAB5CP51148 216 aa10.07□□□□□ -0.8
FBXO28-204ENST00000519894 GAGE1Q13065 139 aa10.07□□□□□ -0.8
FBXO28-204ENST00000519894 GAGE4Q13068 117 aa10.07□□□□□ -0.8
FBXO28-204ENST00000519894 GAGE5Q13069 117 aa10.07□□□□□ -0.8
FBXO28-204ENST00000519894 GAGE13Q4V321 117 aa10.07□□□□□ -0.8
FBXO28-204ENST00000519894 LINC01556Q5JQF7 62 aa10.07□□□□□ -0.8
FBXO28-204ENST00000519894 OR10J3Q5JRS4 329 aa10.07□□□□□ -0.8
FBXO28-204ENST00000519894 C10orf126Q8N4M7 172 aa10.07□□□□□ -0.8
FBXO28-204ENST00000519894 SFRP2Q96HF1 295 aa10.07□□□□□ -0.8
FBXO28-204ENST00000519894 M0R381 172 aa10.06□□□□□ -0.8
FBXO28-204ENST00000519894 CDK2AP2O75956 126 aa10.06□□□□□ -0.8
FBXO28-204ENST00000519894 RPL19P84098 196 aaKnown RBP10.06□□□□□ -0.8
FBXO28-204ENST00000519894 MANBALQ9NQG1 85 aa10.06□□□□□ -0.8
FBXO28-204ENST00000519894 GNG13Q9P2W3 67 aa10.06□□□□□ -0.8
FBXO28-204ENST00000519894 HSPG2P98160 4391 aa10.05□□□□□ -0.8
FBXO28-204ENST00000519894 A0A087WTM6 91 aa10.05□□□□□ -0.8
FBXO28-204ENST00000519894 A0A087WWL8 130 aa10.05□□□□□ -0.8
FBXO28-204ENST00000519894 RHODO00212 210 aa10.05□□□□□ -0.8
FBXO28-204ENST00000519894 FUSP35637 526 aaKnown RBP eCLIP10.05□□□□□ -0.8
FBXO28-204ENST00000519894 ERVFC1-1P60608 527 aa10.05□□□□□ -0.8
FBXO28-204ENST00000519894 FAM74A4Q5TZK3 123 aa10.05□□□□□ -0.8
FBXO28-204ENST00000519894 EIF5AL1Q6IS14 154 aaKnown RBP10.05□□□□□ -0.8
FBXO28-204ENST00000519894 ZFP82Q8N141 532 aa10.05□□□□□ -0.8
FBXO28-204ENST00000519894 C9orf62Q8N4C0 152 aa10.05□□□□□ -0.8
FBXO28-204ENST00000519894 C11orf52Q96A22 123 aa10.05□□□□□ -0.8
FBXO28-204ENST00000519894 IBA57-AS1B1ANH7 110 aa10.04□□□□□ -0.8
FBXO28-204ENST00000519894 EREGO14944 169 aa10.04□□□□□ -0.8
FBXO28-204ENST00000519894 IGHV3-30P01768 117 aa10.04□□□□□ -0.8
FBXO28-204ENST00000519894 IGHV3-33P01772 117 aa10.04□□□□□ -0.8
FBXO28-204ENST00000519894 CXCL1P09341 107 aa10.04□□□□□ -0.8
FBXO28-204ENST00000519894 IGHV3-30-3P0DP02 117 aa10.04□□□□□ -0.8
FBXO28-204ENST00000519894 IGHV3-30-5P0DP03 117 aa10.04□□□□□ -0.8
FBXO28-204ENST00000519894 RPL35P42766 123 aaKnown RBP10.04□□□□□ -0.8
FBXO28-204ENST00000519894 SLC51BQ86UW2 128 aa10.04□□□□□ -0.8
FBXO28-204ENST00000519894 DERL1Q9BUN8 251 aa10.04□□□□□ -0.8
FBXO28-204ENST00000519894 APOBP04114 4563 aaKnown RBP10.03□□□□□ -0.8
FBXO28-204ENST00000519894 PRR27Q6MZM9 219 aa10.03□□□□□ -0.8
FBXO28-204ENST00000519894 SSBP4Q9BWG4 385 aaPredicted RBP10.03□□□□□ -0.8
FBXO28-204ENST00000519894 KRTAP4-5Q9BYR2 181 aa10.03□□□□□ -0.8
FBXO28-204ENST00000519894 TEX46H3BTG2 121 aa10.02□□□□□ -0.81
FBXO28-204ENST00000519894 SNAI2O43623 268 aa10.02□□□□□ -0.81
FBXO28-204ENST00000519894 IGLV2-8P01709 118 aa10.02□□□□□ -0.81
FBXO28-204ENST00000519894 OR10AG1Q8NH19 301 aa10.02□□□□□ -0.81
FBXO28-204ENST00000519894 RAB19A4D1S5 217 aa10□□□□□ -0.81
FBXO28-204ENST00000519894 OR5AL1P0C617 328 aa10□□□□□ -0.81
FBXO28-204ENST00000519894 NKX2-5P52952 324 aaPredicted RBP10□□□□□ -0.81
FBXO28-204ENST00000519894 CENPWQ5EE01 88 aa10□□□□□ -0.81
FBXO28-204ENST00000519894 MUC21A0A0G2JKD1 596 aa9.99□□□□□ -0.81
FBXO28-204ENST00000519894 TRBV10-1A0A0K0K1A3 114 aa9.99□□□□□ -0.81
FBXO28-204ENST00000519894 MUC21A0A140T8X8 626 aa9.99□□□□□ -0.81
FBXO28-204ENST00000519894 LRCOL1A6NCL2 159 aa9.99□□□□□ -0.81
FBXO28-204ENST00000519894 MEF2BQ02080 365 aaPredicted RBP9.99□□□□□ -0.81
FBXO28-204ENST00000519894 CDPF1Q6NVV7 123 aa9.99□□□□□ -0.81
FBXO28-204ENST00000519894 Q9HAA7 133 aa9.99□□□□□ -0.81
FBXO28-204ENST00000519894 A0A087WWC5 75 aa9.98□□□□□ -0.81
FBXO28-204ENST00000519894 PSCAO43653 123 aa9.98□□□□□ -0.81
FBXO28-204ENST00000519894 RAB4BP61018 213 aa9.98□□□□□ -0.81
FBXO28-204ENST00000519894 SPANXN1Q5VSR9 72 aa9.98□□□□□ -0.81
FBXO28-204ENST00000519894 MAPKAPK5-AS1Q8N8E1 139 aa9.98□□□□□ -0.81
FBXO28-204ENST00000519894 PCLOQ9Y6V0 5065 aa9.97□□□□□ -0.81
FBXO28-204ENST00000519894 C19orf71A6NCJ1 209 aa9.97□□□□□ -0.81
FBXO28-204ENST00000519894 PDE6DO43924 150 aa9.97□□□□□ -0.81
FBXO28-204ENST00000519894 IFNA1P01562 189 aa9.97□□□□□ -0.81
FBXO28-204ENST00000519894 BCL2P10415 239 aa9.97□□□□□ -0.81
FBXO28-204ENST00000519894 UBE2D3P61077 147 aa9.97□□□□□ -0.81
FBXO28-204ENST00000519894 SSTP61278 116 aa9.97□□□□□ -0.81
FBXO28-204ENST00000519894 UBE2D2P62837 147 aa9.97□□□□□ -0.81
FBXO28-204ENST00000519894 RPL36AP83881 106 aaKnown RBP9.97□□□□□ -0.81
FBXO28-204ENST00000519894 LAGE3Q14657 143 aa9.97□□□□□ -0.81
FBXO28-204ENST00000519894 DAZ4Q86SG3 579 aaKnown RBP9.97□□□□□ -0.81
FBXO28-204ENST00000519894 OR10G8Q8NGN5 311 aa9.97□□□□□ -0.81
FBXO28-204ENST00000519894 RPL36ALQ969Q0 106 aaKnown RBP9.97□□□□□ -0.81
FBXO28-204ENST00000519894 DAZ3Q9NR90 486 aaKnown RBP9.97□□□□□ -0.81
FBXO28-204ENST00000519894 MED9Q9NWA0 146 aa9.97□□□□□ -0.81
FBXO28-204ENST00000519894 TRBV20OR9-2A0A075B6H5 130 aa9.96□□□□□ -0.82
FBXO28-204ENST00000519894 TRBV7-3A0A075B6L6 115 aa9.96□□□□□ -0.82
FBXO28-204ENST00000519894 GZMBP10144 247 aa9.96□□□□□ -0.82
FBXO28-204ENST00000519894 GNG4P50150 75 aa9.96□□□□□ -0.82
FBXO28-204ENST00000519894 ZNF56Q15929 161 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms