RNA–Protein interactions for RNA: ENST00000519768.5

CTNNA1-218, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-218ENST00000519768 NIT1Q86X76 327 aa2.82□□□□□ -1.96
CTNNA1-218ENST00000519768 ZNF680Q8NEM1 530 aa2.82□□□□□ -1.96
CTNNA1-218ENST00000519768 OR5H2Q8NGV7 314 aa2.82□□□□□ -1.96
CTNNA1-218ENST00000519768 ZC2HC1AQ96GY0 325 aa2.82□□□□□ -1.96
CTNNA1-218ENST00000519768 SAMD10Q9BYL1 202 aa2.82□□□□□ -1.96
CTNNA1-218ENST00000519768 GTSF1LQ9H1H1 148 aa2.82□□□□□ -1.96
CTNNA1-218ENST00000519768 DUSP21Q9H596 190 aa2.82□□□□□ -1.96
CTNNA1-218ENST00000519768 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.82□□□□□ -1.96
CTNNA1-218ENST00000519768 TRAV8-1A0A0A6YYK1 113 aa2.81□□□□□ -1.96
CTNNA1-218ENST00000519768 TRAV4A0A0B4J268 109 aa2.81□□□□□ -1.96
CTNNA1-218ENST00000519768 FAM168BA1KXE4 195 aa2.81□□□□□ -1.96
CTNNA1-218ENST00000519768 GGTLC3B5MD39 225 aa2.81□□□□□ -1.96
CTNNA1-218ENST00000519768 KRTAP4-16G5E9R7 235 aaPredicted RBP2.81□□□□□ -1.96
CTNNA1-218ENST00000519768 SLC25A5P05141 298 aaKnown RBP2.81□□□□□ -1.96
CTNNA1-218ENST00000519768 PIGPP57054 158 aa2.81□□□□□ -1.96
CTNNA1-218ENST00000519768 HERVK_113P61574 105 aa2.81□□□□□ -1.96
CTNNA1-218ENST00000519768 TSPAN5P62079 268 aa2.81□□□□□ -1.96
CTNNA1-218ENST00000519768 REG3AQ06141 175 aa2.81□□□□□ -1.96
CTNNA1-218ENST00000519768 GCSAMLQ5JQS6 135 aa2.81□□□□□ -1.96
CTNNA1-218ENST00000519768 SAMD13Q5VXD3 122 aa2.81□□□□□ -1.96
CTNNA1-218ENST00000519768 SH2D6Q7Z4S9 175 aa2.81□□□□□ -1.96
CTNNA1-218ENST00000519768 CAMK2N1Q7Z7J9 78 aa2.81□□□□□ -1.96
CTNNA1-218ENST00000519768 LGI3Q8N145 548 aa2.81□□□□□ -1.96
CTNNA1-218ENST00000519768 MGLLQ99685 303 aa2.81□□□□□ -1.96
CTNNA1-218ENST00000519768 NEBP20929 6669 aa2.81□□□□□ -1.96
CTNNA1-218ENST00000519768 TRDV1A0A1B0GX56 115 aa2.8□□□□□ -1.96
CTNNA1-218ENST00000519768 FAM24AA6NFZ4 105 aa2.8□□□□□ -1.96
CTNNA1-218ENST00000519768 CRYM-AS1A6NIL9 109 aa2.8□□□□□ -1.96
CTNNA1-218ENST00000519768 UPK1BO75841 260 aa2.8□□□□□ -1.96
CTNNA1-218ENST00000519768 CDS2O95674 445 aa2.8□□□□□ -1.96
CTNNA1-218ENST00000519768 PFN1P07737 140 aaKnown RBP2.8□□□□□ -1.96
CTNNA1-218ENST00000519768 OR5G3P0C626 314 aa2.8□□□□□ -1.96
CTNNA1-218ENST00000519768 OR4E1P0C645 316 aa2.8□□□□□ -1.96
CTNNA1-218ENST00000519768 LINC00694P0DN24 101 aa2.8□□□□□ -1.96
CTNNA1-218ENST00000519768 IAPPP10997 89 aa2.8□□□□□ -1.96
CTNNA1-218ENST00000519768 CRISP2P16562 243 aa2.8□□□□□ -1.96
CTNNA1-218ENST00000519768 TGFBR1P36897 503 aa2.8□□□□□ -1.96
CTNNA1-218ENST00000519768 MLLT11Q13015 90 aaPredicted RBP2.8□□□□□ -1.96
CTNNA1-218ENST00000519768 LPCAT3Q6P1A2 487 aa2.8□□□□□ -1.96
CTNNA1-218ENST00000519768 CEND1Q8N111 149 aa2.8□□□□□ -1.96
CTNNA1-218ENST00000519768 BORCS5Q969J3 196 aa2.8□□□□□ -1.96
CTNNA1-218ENST00000519768 ODF3Q96PU9 254 aa2.8□□□□□ -1.96
CTNNA1-218ENST00000519768 TMEM147Q9BVK8 224 aa2.8□□□□□ -1.96
CTNNA1-218ENST00000519768 SLC25A2Q9BXI2 301 aa2.8□□□□□ -1.96
CTNNA1-218ENST00000519768 CCDC90BQ9GZT6 254 aa2.8□□□□□ -1.96
CTNNA1-218ENST00000519768 ACOT13Q9NPJ3 140 aa2.8□□□□□ -1.96
CTNNA1-218ENST00000519768 MED4Q9NPJ6 270 aa2.8□□□□□ -1.96
CTNNA1-218ENST00000519768 IFT46Q9NQC8 304 aa2.8□□□□□ -1.96
CTNNA1-218ENST00000519768 TXNL4BQ9NX01 149 aaKnown RBP2.8□□□□□ -1.96
CTNNA1-218ENST00000519768 MTFP1Q9UDX5 166 aa2.8□□□□□ -1.96
CTNNA1-218ENST00000519768 IGKV2-40A0A087WW87 121 aaPredicted RBP2.79□□□□□ -1.96
CTNNA1-218ENST00000519768 IGHV3OR16-9A0A0B4J2B5 98 aa2.79□□□□□ -1.96
CTNNA1-218ENST00000519768 IGKV2-24A0A0C4DH68 120 aa2.79□□□□□ -1.96
CTNNA1-218ENST00000519768 K7EN84 100 aa2.79□□□□□ -1.96
CTNNA1-218ENST00000519768 NDUFS6O75380 124 aaKnown RBP2.79□□□□□ -1.96
CTNNA1-218ENST00000519768 PTTG1O95997 202 aa2.79□□□□□ -1.96
CTNNA1-218ENST00000519768 IGKV2D-40P01614 121 aaPredicted RBP2.79□□□□□ -1.96
CTNNA1-218ENST00000519768 HLA-DQA1P01909 254 aa2.79□□□□□ -1.96
CTNNA1-218ENST00000519768 GPX1P07203 203 aa2.79□□□□□ -1.96
CTNNA1-218ENST00000519768 KRTAP1-4P0C5Y4 121 aa2.79□□□□□ -1.96
CTNNA1-218ENST00000519768 OR5AL1P0C617 328 aa2.79□□□□□ -1.96
CTNNA1-218ENST00000519768 IGLC2P0DOY2 106 aa2.79□□□□□ -1.96
CTNNA1-218ENST00000519768 RPL7P18124 248 aaKnown RBP2.79□□□□□ -1.96
CTNNA1-218ENST00000519768 SDC2P34741 201 aa2.79□□□□□ -1.96
CTNNA1-218ENST00000519768 ZNF138P52744 262 aa2.79□□□□□ -1.96
CTNNA1-218ENST00000519768 MT1HP80294 61 aa2.79□□□□□ -1.96
CTNNA1-218ENST00000519768 COX6A2Q02221 97 aa2.79□□□□□ -1.96
CTNNA1-218ENST00000519768 TRAM1Q15629 374 aa2.79□□□□□ -1.96
CTNNA1-218ENST00000519768 TMEM183BQ1AE95 376 aa2.79□□□□□ -1.96
CTNNA1-218ENST00000519768 C9orf129Q5T035 196 aaKnown RBP2.79□□□□□ -1.96
CTNNA1-218ENST00000519768 LHFPL1Q86WI0 220 aa2.79□□□□□ -1.96
CTNNA1-218ENST00000519768 TMEM183AQ8IXX5 376 aa2.79□□□□□ -1.96
CTNNA1-218ENST00000519768 TMEM75Q8N9X5 138 aa2.79□□□□□ -1.96
CTNNA1-218ENST00000519768 C20orf203Q8NBC4 194 aa2.79□□□□□ -1.96
CTNNA1-218ENST00000519768 Q8TAT8 98 aa2.79□□□□□ -1.96
CTNNA1-218ENST00000519768 DTD1Q8TEA8 209 aa2.79□□□□□ -1.96
CTNNA1-218ENST00000519768 GPR82Q96P67 336 aa2.79□□□□□ -1.96
CTNNA1-218ENST00000519768 RTBDNQ9BSG5 229 aaPredicted RBP2.79□□□□□ -1.96
CTNNA1-218ENST00000519768 HIGD1AQ9Y241 93 aa2.79□□□□□ -1.96
CTNNA1-218ENST00000519768 U3KQ87 197 aa2.79□□□□□ -1.96
CTNNA1-218ENST00000519768 TRAV26-2A0A0B4J265 109 aa2.78□□□□□ -1.96
CTNNA1-218ENST00000519768 GABARAPH6UMI1 98 aa2.78□□□□□ -1.96
CTNNA1-218ENST00000519768 SNAI2O43623 268 aa2.78□□□□□ -1.96
CTNNA1-218ENST00000519768 HYPMO75409 117 aa2.78□□□□□ -1.96
CTNNA1-218ENST00000519768 GABARAPO95166 117 aa2.78□□□□□ -1.96
CTNNA1-218ENST00000519768 OR10J4P0C629 311 aa2.78□□□□□ -1.96
CTNNA1-218ENST00000519768 CAV2P51636 162 aa2.78□□□□□ -1.96
CTNNA1-218ENST00000519768 RPL19P84098 196 aaKnown RBP2.78□□□□□ -1.96
CTNNA1-218ENST00000519768 C5orf47Q569G3 176 aa2.78□□□□□ -1.96
CTNNA1-218ENST00000519768 CFAP126Q5VTH2 177 aa2.78□□□□□ -1.96
CTNNA1-218ENST00000519768 CYP2G1PQ6ZSU1 146 aa2.78□□□□□ -1.96
CTNNA1-218ENST00000519768 LYZL2Q7Z4W2 148 aa2.78□□□□□ -1.96
CTNNA1-218ENST00000519768 KRTAP11-1Q8IUC1 163 aa2.78□□□□□ -1.96
CTNNA1-218ENST00000519768 C8orf59Q8N0T1 100 aaPredicted RBP2.78□□□□□ -1.96
CTNNA1-218ENST00000519768 EXOC3-AS1Q8N2X6 119 aa2.78□□□□□ -1.96
CTNNA1-218ENST00000519768 RNASE11Q8TAA1 199 aaKnown RBP2.78□□□□□ -1.96
CTNNA1-218ENST00000519768 RAB2BQ8WUD1 216 aa2.78□□□□□ -1.96
CTNNA1-218ENST00000519768 RNF185Q96GF1 192 aa2.78□□□□□ -1.96
CTNNA1-218ENST00000519768 RETNLBQ9BQ08 111 aa2.78□□□□□ -1.96
CTNNA1-218ENST00000519768 SLIRPQ9GZT3 109 aaKnown RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms