RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 SPANXN1Q5VSR9 72 aa5.46□□□□□ -1.54
SDCBP-206ENST00000519115 MRPL54Q6P161 138 aaKnown RBP5.46□□□□□ -1.54
SDCBP-206ENST00000519115 ZNF705AQ6ZN79 300 aaPredicted RBP5.46□□□□□ -1.54
SDCBP-206ENST00000519115 Q8NAQ8 132 aa5.46□□□□□ -1.54
SDCBP-206ENST00000519115 IL17DQ8TAD2 202 aa5.46□□□□□ -1.54
SDCBP-206ENST00000519115 RASL10AQ92737 203 aa5.46□□□□□ -1.54
SDCBP-206ENST00000519115 HIST1H2BHQ93079 126 aa5.46□□□□□ -1.54
SDCBP-206ENST00000519115 LINC01587Q99440 93 aa5.46□□□□□ -1.54
SDCBP-206ENST00000519115 HIST1H2BNQ99877 126 aa5.46□□□□□ -1.54
SDCBP-206ENST00000519115 HIST1H2BMQ99879 126 aa5.46□□□□□ -1.54
SDCBP-206ENST00000519115 MRPL18Q9H0U6 180 aaKnown RBP5.46□□□□□ -1.54
SDCBP-206ENST00000519115 C11orf68Q9H3H3 251 aaKnown RBP5.46□□□□□ -1.54
SDCBP-206ENST00000519115 GSN-AS1Q9NRJ2 163 aa5.46□□□□□ -1.54
SDCBP-206ENST00000519115 NAGKQ9UJ70 344 aa5.46□□□□□ -1.54
SDCBP-206ENST00000519115 X6R8D5 127 aa5.46□□□□□ -1.54
SDCBP-206ENST00000519115 TRAV12-2A0A075B6T6 113 aa5.45□□□□□ -1.54
SDCBP-206ENST00000519115 A8MWV9 139 aa5.45□□□□□ -1.54
SDCBP-206ENST00000519115 K7EMI3 77 aa5.45□□□□□ -1.54
SDCBP-206ENST00000519115 M0R2P5 195 aa5.45□□□□□ -1.54
SDCBP-206ENST00000519115 GNRH2O43555 120 aa5.45□□□□□ -1.54
SDCBP-206ENST00000519115 RBMY1A1P0DJD3 496 aaKnown RBP5.45□□□□□ -1.54
SDCBP-206ENST00000519115 RBMY1CP0DJD4 496 aa5.45□□□□□ -1.54
SDCBP-206ENST00000519115 GZMBP10144 247 aa5.45□□□□□ -1.54
SDCBP-206ENST00000519115 ESDP10768 282 aa5.45□□□□□ -1.54
SDCBP-206ENST00000519115 ZNF415Q09FC8 603 aa5.45□□□□□ -1.54
SDCBP-206ENST00000519115 KIR3DS1Q14943 382 aa5.45□□□□□ -1.54
SDCBP-206ENST00000519115 RBMY1FQ15415 496 aaKnown RBP5.45□□□□□ -1.54
SDCBP-206ENST00000519115 TWIST1Q15672 202 aa5.45□□□□□ -1.54
SDCBP-206ENST00000519115 C1orf158Q8N1D5 194 aa5.45□□□□□ -1.54
SDCBP-206ENST00000519115 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.45□□□□□ -1.54
SDCBP-206ENST00000519115 TMEM263Q8WUH6 116 aaKnown RBP5.45□□□□□ -1.54
SDCBP-206ENST00000519115 MRAP2Q96G30 205 aa5.45□□□□□ -1.54
SDCBP-206ENST00000519115 C18orf15Q96N68 181 aa5.45□□□□□ -1.54
SDCBP-206ENST00000519115 DNAH7Q8WXX0 4024 aa5.45□□□□□ -1.54
SDCBP-206ENST00000519115 TMSB15BA0A087X1C1 80 aa5.44□□□□□ -1.54
SDCBP-206ENST00000519115 GRIFINA4D1Z8 144 aa5.44□□□□□ -1.54
SDCBP-206ENST00000519115 C5orf52A6NGY3 159 aa5.44□□□□□ -1.54
SDCBP-206ENST00000519115 M0R381 172 aa5.44□□□□□ -1.54
SDCBP-206ENST00000519115 S100A6P06703 90 aa5.44□□□□□ -1.54
SDCBP-206ENST00000519115 MIFP14174 115 aa5.44□□□□□ -1.54
SDCBP-206ENST00000519115 CAMPP49913 170 aa5.44□□□□□ -1.54
SDCBP-206ENST00000519115 NANOS2P60321 138 aaKnown RBP5.44□□□□□ -1.54
SDCBP-206ENST00000519115 RAB4BP61018 213 aa5.44□□□□□ -1.54
SDCBP-206ENST00000519115 RPL32P62910 135 aaKnown RBP5.44□□□□□ -1.54
SDCBP-206ENST00000519115 ZFP2Q6ZN57 461 aa5.44□□□□□ -1.54
SDCBP-206ENST00000519115 C16orf74Q96GX8 76 aa5.44□□□□□ -1.54
SDCBP-206ENST00000519115 AP1S3Q96PC3 154 aa5.44□□□□□ -1.54
SDCBP-206ENST00000519115 ALKBH7Q9BT30 221 aaPredicted RBP5.44□□□□□ -1.54
SDCBP-206ENST00000519115 CBY3A6NI87 242 aa5.43□□□□□ -1.54
SDCBP-206ENST00000519115 LINC01549A6NIU2 74 aa5.43□□□□□ -1.54
SDCBP-206ENST00000519115 H3BVH4 76 aa5.43□□□□□ -1.54
SDCBP-206ENST00000519115 J3KRW8 73 aa5.43□□□□□ -1.54
SDCBP-206ENST00000519115 PRM2P04554 102 aa5.43□□□□□ -1.54
SDCBP-206ENST00000519115 RAB4AP20338 218 aa5.43□□□□□ -1.54
SDCBP-206ENST00000519115 PMCHP20382 165 aa5.43□□□□□ -1.54
SDCBP-206ENST00000519115 HOXA5P20719 270 aa5.43□□□□□ -1.54
SDCBP-206ENST00000519115 EMP1P54849 157 aa5.43□□□□□ -1.54
SDCBP-206ENST00000519115 SLAQ13239 276 aa5.43□□□□□ -1.54
SDCBP-206ENST00000519115 ANKRD39Q53RE8 183 aa5.43□□□□□ -1.54
SDCBP-206ENST00000519115 MUC21Q5SSG8 566 aa5.43□□□□□ -1.54
SDCBP-206ENST00000519115 ORMDL3Q8N138 153 aa5.43□□□□□ -1.54
SDCBP-206ENST00000519115 C11orf72Q8NBR9 251 aa5.43□□□□□ -1.54
SDCBP-206ENST00000519115 OR10AG1Q8NH19 301 aa5.43□□□□□ -1.54
SDCBP-206ENST00000519115 C11orf45Q8TAV5 145 aa5.43□□□□□ -1.54
SDCBP-206ENST00000519115 RNASE8Q8TDE3 154 aaKnown RBP5.43□□□□□ -1.54
SDCBP-206ENST00000519115 C20orf78Q9BR46 151 aa5.43□□□□□ -1.54
SDCBP-206ENST00000519115 TMEM208Q9BTX3 173 aa5.43□□□□□ -1.54
SDCBP-206ENST00000519115 DPH3P1Q9H4G8 78 aa5.43□□□□□ -1.54
SDCBP-206ENST00000519115 CELA1Q9UNI1 258 aa5.43□□□□□ -1.54
SDCBP-206ENST00000519115 LINC01546A6NGU7 62 aa5.42□□□□□ -1.54
SDCBP-206ENST00000519115 RHODO00212 210 aa5.42□□□□□ -1.54
SDCBP-206ENST00000519115 TCAPO15273 167 aa5.42□□□□□ -1.54
SDCBP-206ENST00000519115 SPINK4O60575 86 aa5.42□□□□□ -1.54
SDCBP-206ENST00000519115 SMIM17P0DL12 118 aa5.42□□□□□ -1.54
SDCBP-206ENST00000519115 G0S2P27469 103 aa5.42□□□□□ -1.54
SDCBP-206ENST00000519115 RRN3P1Q2M238 152 aa5.42□□□□□ -1.54
SDCBP-206ENST00000519115 ZNF876PQ49A33 203 aa5.42□□□□□ -1.54
SDCBP-206ENST00000519115 Q6ZQT7 251 aa5.42□□□□□ -1.54
SDCBP-206ENST00000519115 CHCHD1Q96BP2 118 aaKnown RBP5.42□□□□□ -1.54
SDCBP-206ENST00000519115 TPPP3Q9BW30 176 aa5.42□□□□□ -1.54
SDCBP-206ENST00000519115 MDFICQ9P1T7 246 aa5.42□□□□□ -1.54
SDCBP-206ENST00000519115 KIF25-AS1Q9Y6Z4 181 aa5.42□□□□□ -1.54
SDCBP-206ENST00000519115 CSMD3Q7Z407 3707 aa5.41□□□□□ -1.54
SDCBP-206ENST00000519115 TEX48A0A1B0GUV7 120 aa5.41□□□□□ -1.54
SDCBP-206ENST00000519115 NUPR2A6NF83 97 aa5.41□□□□□ -1.54
SDCBP-206ENST00000519115 H7C1H1 209 aa5.41□□□□□ -1.54
SDCBP-206ENST00000519115 EVI2AP22794 236 aa5.41□□□□□ -1.54
SDCBP-206ENST00000519115 CKS2P33552 79 aa5.41□□□□□ -1.54
SDCBP-206ENST00000519115 LINC00315P59091 139 aa5.41□□□□□ -1.54
SDCBP-206ENST00000519115 MRPL51Q4U2R6 128 aaKnown RBP5.41□□□□□ -1.54
SDCBP-206ENST00000519115 PHLDA1Q8WV24 401 aaPredicted RBP5.41□□□□□ -1.54
SDCBP-206ENST00000519115 RNF185Q96GF1 192 aa5.41□□□□□ -1.54
SDCBP-206ENST00000519115 NXT2Q9NPJ8 142 aaKnown RBP5.41□□□□□ -1.54
SDCBP-206ENST00000519115 TIMM8BQ9Y5J9 83 aaPredicted RBP5.41□□□□□ -1.54
SDCBP-206ENST00000519115 TRBV6-5A0A0K0K1A5 114 aa5.4□□□□□ -1.54
SDCBP-206ENST00000519115 LYRM9A8MSI8 78 aa5.4□□□□□ -1.54
SDCBP-206ENST00000519115 CRYGDP07320 174 aa5.4□□□□□ -1.54
SDCBP-206ENST00000519115 HTN1P15515 57 aa5.4□□□□□ -1.54
SDCBP-206ENST00000519115 SRIP30626 198 aa5.4□□□□□ -1.54
SDCBP-206ENST00000519115 XP32Q5T750 250 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms