RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	BIN3	Q9NQY0	253 aa		16.42	■□□□□ 0.22
CNOT7-204	ENST00000518885	HERC2	O95714	4834 aa		16.42	■□□□□ 0.22
CNOT7-204	ENST00000518885	GAGE12J	A6NER3	117 aa		16.41	■□□□□ 0.22
CNOT7-204	ENST00000518885	GNG4	P50150	75 aa		16.41	■□□□□ 0.22
CNOT7-204	ENST00000518885	GAGE1	Q13065	139 aa		16.41	■□□□□ 0.22
CNOT7-204	ENST00000518885	GAGE4	Q13068	117 aa		16.41	■□□□□ 0.22
CNOT7-204	ENST00000518885	GAGE5	Q13069	117 aa		16.41	■□□□□ 0.22
CNOT7-204	ENST00000518885	GAGE13	Q4V321	117 aa		16.41	■□□□□ 0.22
CNOT7-204	ENST00000518885		Q6ZRN7	208 aa	Predicted RBP	16.41	■□□□□ 0.22
CNOT7-204	ENST00000518885	SAMD10	Q9BYL1	202 aa		16.41	■□□□□ 0.22
CNOT7-204	ENST00000518885	DNAH11	Q96DT5	4516 aa		16.4	■□□□□ 0.22
CNOT7-204	ENST00000518885	BCL2	P10415	239 aa		16.4	■□□□□ 0.22
CNOT7-204	ENST00000518885	CENPW	Q5EE01	88 aa		16.4	■□□□□ 0.22
CNOT7-204	ENST00000518885		Q6ZSN1	163 aa		16.4	■□□□□ 0.22
CNOT7-204	ENST00000518885	VAX2	Q9UIW0	290 aa		16.4	■□□□□ 0.22
CNOT7-204	ENST00000518885		A0A087WWL8	130 aa		16.39	■□□□□ 0.21
CNOT7-204	ENST00000518885	SPANXN1	Q5VSR9	72 aa		16.39	■□□□□ 0.21
CNOT7-204	ENST00000518885	C9orf62	Q8N4C0	152 aa		16.39	■□□□□ 0.21
CNOT7-204	ENST00000518885	KIAA1109	Q2LD37	5005 aa		16.38	■□□□□ 0.21
CNOT7-204	ENST00000518885	TRBV10-1	A0A0K0K1A3	114 aa		16.38	■□□□□ 0.21
CNOT7-204	ENST00000518885	OR5AL1	P0C617	328 aa		16.38	■□□□□ 0.21
CNOT7-204	ENST00000518885	RPS20	P60866	119 aa	Known RBP	16.38	■□□□□ 0.21
CNOT7-204	ENST00000518885	RPL19	P84098	196 aa	Known RBP	16.38	■□□□□ 0.21
CNOT7-204	ENST00000518885	DERL1	Q9BUN8	251 aa		16.38	■□□□□ 0.21
CNOT7-204	ENST00000518885	MED9	Q9NWA0	146 aa		16.38	■□□□□ 0.21
CNOT7-204	ENST00000518885	XKRY2	A2RUG3	117 aa		16.37	■□□□□ 0.21
CNOT7-204	ENST00000518885	C14orf178	Q8N769	122 aa	Predicted RBP	16.37	■□□□□ 0.21
CNOT7-204	ENST00000518885	SNAI2	O43623	268 aa		16.36	■□□□□ 0.21
CNOT7-204	ENST00000518885	LINC00694	P0DN24	101 aa		16.36	■□□□□ 0.21
CNOT7-204	ENST00000518885	BLOC1S1	P78537	153 aa		16.36	■□□□□ 0.21
CNOT7-204	ENST00000518885	RPL36A	P83881	106 aa	Known RBP	16.36	■□□□□ 0.21
CNOT7-204	ENST00000518885	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	16.36	■□□□□ 0.21
CNOT7-204	ENST00000518885	RPL36AL	Q969Q0	106 aa	Known RBP	16.36	■□□□□ 0.21
CNOT7-204	ENST00000518885	SSBP4	Q9BWG4	385 aa	Predicted RBP	16.36	■□□□□ 0.21
CNOT7-204	ENST00000518885	PGPEP1	Q9NXJ5	209 aa		16.36	■□□□□ 0.21
CNOT7-204	ENST00000518885	PSCA	O43653	123 aa		16.35	■□□□□ 0.21
CNOT7-204	ENST00000518885	RAB4B	P61018	213 aa		16.35	■□□□□ 0.21
CNOT7-204	ENST00000518885	OR10AG1	Q8NH19	301 aa		16.35	■□□□□ 0.21
CNOT7-204	ENST00000518885	IBA57-AS1	B1ANH7	110 aa		16.34	■□□□□ 0.21
CNOT7-204	ENST00000518885	SMIM17	P0DL12	118 aa		16.34	■□□□□ 0.21
CNOT7-204	ENST00000518885	LAGE3	Q14657	143 aa		16.34	■□□□□ 0.21
CNOT7-204	ENST00000518885	CDPF1	Q6NVV7	123 aa		16.34	■□□□□ 0.21
CNOT7-204	ENST00000518885	TNFRSF18	Q9Y5U5	241 aa		16.34	■□□□□ 0.21
CNOT7-204	ENST00000518885	DYNC1H1	Q14204	4646 aa	Known RBP	16.33	■□□□□ 0.21
CNOT7-204	ENST00000518885	ZNF56	Q15929	161 aa		16.33	■□□□□ 0.2
CNOT7-204	ENST00000518885	TOR2A	Q5JU69	321 aa		16.33	■□□□□ 0.2
CNOT7-204	ENST00000518885	URGCP-MRPS24	S4R325	110 aa		16.33	■□□□□ 0.2
CNOT7-204	ENST00000518885	CDK2AP2	O75956	126 aa		16.32	■□□□□ 0.2
CNOT7-204	ENST00000518885		P01737	135 aa		16.32	■□□□□ 0.2
CNOT7-204	ENST00000518885	IGHV3-30	P01768	117 aa		16.32	■□□□□ 0.2
CNOT7-204	ENST00000518885	IGHV3-33	P01772	117 aa		16.32	■□□□□ 0.2
CNOT7-204	ENST00000518885	IGHV3-30-3	P0DP02	117 aa		16.32	■□□□□ 0.2
CNOT7-204	ENST00000518885	IGHV3-30-5	P0DP03	117 aa		16.32	■□□□□ 0.2
CNOT7-204	ENST00000518885	OR2D3	Q8NGH3	330 aa		16.32	■□□□□ 0.2
CNOT7-204	ENST00000518885	AP1S3	Q96PC3	154 aa		16.32	■□□□□ 0.2
CNOT7-204	ENST00000518885	TRBV7-3	A0A075B6L6	115 aa		16.31	■□□□□ 0.2
CNOT7-204	ENST00000518885	RAB19	A4D1S5	217 aa		16.31	■□□□□ 0.2
CNOT7-204	ENST00000518885	KCNIP4	Q6PIL6	250 aa		16.3	■□□□□ 0.2
CNOT7-204	ENST00000518885	ALKAL2	Q6UX46	152 aa		16.3	■□□□□ 0.2
CNOT7-204	ENST00000518885	TPPP3	Q9BW30	176 aa		16.3	■□□□□ 0.2
CNOT7-204	ENST00000518885		A0A087WTM6	91 aa		16.29	■□□□□ 0.2
CNOT7-204	ENST00000518885	C19orf71	A6NCJ1	209 aa		16.29	■□□□□ 0.2
CNOT7-204	ENST00000518885		F2Z2F3	143 aa		16.29	■□□□□ 0.2
CNOT7-204	ENST00000518885		F5H697	171 aa		16.29	■□□□□ 0.2
CNOT7-204	ENST00000518885	IGLV2-8	P01709	118 aa		16.29	■□□□□ 0.2
CNOT7-204	ENST00000518885	KRTAP10-2	P60368	255 aa		16.29	■□□□□ 0.2
CNOT7-204	ENST00000518885	CACNG7	P62955	275 aa		16.29	■□□□□ 0.2
CNOT7-204	ENST00000518885	FER1L6-AS1	Q8NA97	138 aa		16.29	■□□□□ 0.2
CNOT7-204	ENST00000518885	TM2D2	Q9BX73	214 aa		16.29	■□□□□ 0.2
CNOT7-204	ENST00000518885	TRAV8-3	A0A0A6YYJ7	113 aa		16.28	■□□□□ 0.2
CNOT7-204	ENST00000518885	OR10G8	Q8NGN5	311 aa		16.28	■□□□□ 0.2
CNOT7-204	ENST00000518885		Q9HAA7	133 aa		16.28	■□□□□ 0.2
CNOT7-204	ENST00000518885		Q9UF83	564 aa		16.27	■□□□□ 0.2
CNOT7-204	ENST00000518885	MUC21	A0A0G2JKD1	596 aa		16.26	■□□□□ 0.19
CNOT7-204	ENST00000518885	MUC21	A0A140T8X8	626 aa		16.26	■□□□□ 0.19
CNOT7-204	ENST00000518885	UBE2D3	P61077	147 aa		16.26	■□□□□ 0.19
CNOT7-204	ENST00000518885	UBE2D2	P62837	147 aa		16.26	■□□□□ 0.19
CNOT7-204	ENST00000518885	RBFOX3	A6NFN3	312 aa		16.25	■□□□□ 0.19
CNOT7-204	ENST00000518885	TMEM250	H0YL14	139 aa		16.25	■□□□□ 0.19
CNOT7-204	ENST00000518885	IGLC6	P0CF74	106 aa		16.25	■□□□□ 0.19
CNOT7-204	ENST00000518885	SST	P61278	116 aa		16.25	■□□□□ 0.19
CNOT7-204	ENST00000518885	ELOB	Q15370	118 aa		16.25	■□□□□ 0.19
CNOT7-204	ENST00000518885	CHCHD7	Q9BUK0	85 aa		16.25	■□□□□ 0.19
CNOT7-204	ENST00000518885	TRBV20OR9-2	A0A075B6H5	130 aa		16.24	■□□□□ 0.19
CNOT7-204	ENST00000518885		A0A087WX48	190 aa		16.24	■□□□□ 0.19
CNOT7-204	ENST00000518885		H7C1H1	209 aa		16.24	■□□□□ 0.19
CNOT7-204	ENST00000518885	TMEM97	Q5BJF2	176 aa		16.24	■□□□□ 0.19
CNOT7-204	ENST00000518885	COX11	Q9Y6N1	276 aa		16.24	■□□□□ 0.19
CNOT7-204	ENST00000518885	TRGC1	P0CF51	173 aa		16.23	■□□□□ 0.19
CNOT7-204	ENST00000518885	GZMB	P10144	247 aa		16.23	■□□□□ 0.19
CNOT7-204	ENST00000518885	PKIA	P61925	76 aa		16.23	■□□□□ 0.19
CNOT7-204	ENST00000518885	RMI2	Q96E14	147 aa		16.23	■□□□□ 0.19
CNOT7-204	ENST00000518885	LYPD6B	Q8NI32	183 aa		16.22	■□□□□ 0.19
CNOT7-204	ENST00000518885	NIT1	Q86X76	327 aa		16.21	■□□□□ 0.19
CNOT7-204	ENST00000518885	NEXN-AS1	Q8NBZ9	246 aa		16.21	■□□□□ 0.19
CNOT7-204	ENST00000518885	WDR73	Q6P4I2	378 aa		16.2	■□□□□ 0.18
CNOT7-204	ENST00000518885	DAZ4	Q86SG3	579 aa	Known RBP	16.2	■□□□□ 0.18
CNOT7-204	ENST00000518885	NUDT10	Q8NFP7	164 aa		16.2	■□□□□ 0.18
CNOT7-204	ENST00000518885	NTN5	Q8WTR8	489 aa	Predicted RBP	16.2	■□□□□ 0.18
CNOT7-204	ENST00000518885	NUDT11	Q96G61	164 aa		16.2	■□□□□ 0.18

Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms