RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 DAPK1P53355 1430 aa0.7□□□□□ -2.3
RNU6-840P-201ENST00000517275 MYOM3Q5VTT5 1437 aa0.7□□□□□ -2.3
RNU6-840P-201ENST00000517275 MYH6P13533 1939 aa0.7□□□□□ -2.3
RNU6-840P-201ENST00000517275 ZNF469Q96JG9 3925 aaPredicted RBP0.7□□□□□ -2.3
RNU6-840P-201ENST00000517275 BCL9LQ86UU0 1499 aa0.69□□□□□ -2.3
RNU6-840P-201ENST00000517275 TRAV12-3A0A0B4J271 114 aa0.69□□□□□ -2.3
RNU6-840P-201ENST00000517275 APODP05090 189 aa0.69□□□□□ -2.3
RNU6-840P-201ENST00000517275 PRB4P10163 310 aaPredicted RBP0.69□□□□□ -2.3
RNU6-840P-201ENST00000517275 PIPP12273 146 aaPredicted RBP0.69□□□□□ -2.3
RNU6-840P-201ENST00000517275 FGF7P21781 194 aa0.69□□□□□ -2.3
RNU6-840P-201ENST00000517275 ZNF137PP52743 207 aa0.69□□□□□ -2.3
RNU6-840P-201ENST00000517275 COPS9Q8WXC6 57 aa0.69□□□□□ -2.3
RNU6-840P-201ENST00000517275 RERGLQ9H628 205 aa0.69□□□□□ -2.3
RNU6-840P-201ENST00000517275 ZNF142P52746 1687 aaPredicted RBP0.69□□□□□ -2.3
RNU6-840P-201ENST00000517275 ESPL1Q14674 2120 aa0.68□□□□□ -2.3
RNU6-840P-201ENST00000517275 A0A087WTM6 91 aa0.68□□□□□ -2.3
RNU6-840P-201ENST00000517275 TCRBV3S1A0A5B6 114 aa0.68□□□□□ -2.3
RNU6-840P-201ENST00000517275 RBAKDNA6NC62 111 aa0.68□□□□□ -2.3
RNU6-840P-201ENST00000517275 FXYD1O00168 92 aa0.68□□□□□ -2.3
RNU6-840P-201ENST00000517275 GNG7O60262 68 aa0.68□□□□□ -2.3
RNU6-840P-201ENST00000517275 TFF1P04155 84 aa0.68□□□□□ -2.3
RNU6-840P-201ENST00000517275 IL5P05113 134 aa0.68□□□□□ -2.3
RNU6-840P-201ENST00000517275 CBLN1P23435 193 aa0.68□□□□□ -2.3
RNU6-840P-201ENST00000517275 SPINT3P49223 89 aa0.68□□□□□ -2.3
RNU6-840P-201ENST00000517275 RPL13AP3Q6NVV1 102 aa0.68□□□□□ -2.3
RNU6-840P-201ENST00000517275 CYP2G1PQ6ZSU1 146 aa0.68□□□□□ -2.3
RNU6-840P-201ENST00000517275 KRTAP19-3Q7Z4W3 81 aa0.68□□□□□ -2.3
RNU6-840P-201ENST00000517275 SPTSSAQ969W0 71 aa0.68□□□□□ -2.3
RNU6-840P-201ENST00000517275 IBTKQ9P2D0 1353 aaPredicted RBP0.68□□□□□ -2.3
RNU6-840P-201ENST00000517275 LAMB1P07942 1786 aa0.68□□□□□ -2.3
RNU6-840P-201ENST00000517275 AFDNP55196 1824 aaKnown RBP0.67□□□□□ -2.3
RNU6-840P-201ENST00000517275 LY6G6CO95867 125 aa0.67□□□□□ -2.3
RNU6-840P-201ENST00000517275 IFNA17P01571 189 aa0.67□□□□□ -2.3
RNU6-840P-201ENST00000517275 UBE2G1P62253 170 aa0.67□□□□□ -2.3
RNU6-840P-201ENST00000517275 RPRMQ9NS64 109 aa0.67□□□□□ -2.3
RNU6-840P-201ENST00000517275 ZNF518AQ6AHZ1 1483 aa0.67□□□□□ -2.3
RNU6-840P-201ENST00000517275 RREB1Q92766 1687 aa0.66□□□□□ -2.3
RNU6-840P-201ENST00000517275 CCL8P80075 99 aa0.66□□□□□ -2.3
RNU6-840P-201ENST00000517275 ZNF818PQ6ZRF7 136 aa0.66□□□□□ -2.3
RNU6-840P-201ENST00000517275 C4orf33Q8N1A6 199 aa0.66□□□□□ -2.3
RNU6-840P-201ENST00000517275 SEC11CQ9BY50 192 aa0.66□□□□□ -2.3
RNU6-840P-201ENST00000517275 IFT140Q96RY7 1462 aa0.66□□□□□ -2.3
RNU6-840P-201ENST00000517275 NOTCH1P46531 2555 aa0.65□□□□□ -2.3
RNU6-840P-201ENST00000517275 CLPSL1A2RUU4 121 aa0.65□□□□□ -2.31
RNU6-840P-201ENST00000517275 A6NIN4 97 aa0.65□□□□□ -2.31
RNU6-840P-201ENST00000517275 HIST1H1DP16402 221 aaKnown RBP0.65□□□□□ -2.31
RNU6-840P-201ENST00000517275 UBE2D1P51668 147 aa0.65□□□□□ -2.31
RNU6-840P-201ENST00000517275 MEIG1Q5JSS6 88 aa0.65□□□□□ -2.31
RNU6-840P-201ENST00000517275 C20orf197Q8N268 126 aa0.65□□□□□ -2.31
RNU6-840P-201ENST00000517275 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.65□□□□□ -2.31
RNU6-840P-201ENST00000517275 COX7B2Q8TF08 81 aa0.65□□□□□ -2.31
RNU6-840P-201ENST00000517275 DSCR8Q96T75 97 aa0.65□□□□□ -2.31
RNU6-840P-201ENST00000517275 NAA60Q9H7X0 242 aa0.65□□□□□ -2.31
RNU6-840P-201ENST00000517275 SERP1Q9Y6X1 66 aa0.65□□□□□ -2.31
RNU6-840P-201ENST00000517275 KIF13AQ9H1H9 1805 aa0.65□□□□□ -2.31
RNU6-840P-201ENST00000517275 CFTRP13569 1480 aa0.65□□□□□ -2.31
RNU6-840P-201ENST00000517275 DLEU1O43261 78 aa0.64□□□□□ -2.31
RNU6-840P-201ENST00000517275 C6orf52Q5T4I8 152 aa0.64□□□□□ -2.31
RNU6-840P-201ENST00000517275 C12orf73Q69YU5 71 aa0.64□□□□□ -2.31
RNU6-840P-201ENST00000517275 Q6AWC8 147 aa0.64□□□□□ -2.31
RNU6-840P-201ENST00000517275 ZNF462Q96JM2 2506 aa0.64□□□□□ -2.31
RNU6-840P-201ENST00000517275 KDM6BO15054 1643 aa0.64□□□□□ -2.31
RNU6-840P-201ENST00000517275 NAIPQ13075 1403 aa0.64□□□□□ -2.31
RNU6-840P-201ENST00000517275 MUC16Q8WXI7 14507 aa0.63□□□□□ -2.31
RNU6-840P-201ENST00000517275 TRBV7-1A0A0A6YYK4 115 aa0.63□□□□□ -2.31
RNU6-840P-201ENST00000517275 FAM25AB3EWG3 89 aa0.63□□□□□ -2.31
RNU6-840P-201ENST00000517275 FAM25CB3EWG5 89 aa0.63□□□□□ -2.31
RNU6-840P-201ENST00000517275 FAM25GB3EWG6 89 aa0.63□□□□□ -2.31
RNU6-840P-201ENST00000517275 SNCGO76070 127 aa0.63□□□□□ -2.31
RNU6-840P-201ENST00000517275 FAM74A4Q5TZK3 123 aa0.63□□□□□ -2.31
RNU6-840P-201ENST00000517275 RPL7L1Q6DKI1 246 aaKnown RBP0.63□□□□□ -2.31
RNU6-840P-201ENST00000517275 SPATA8Q6RVD6 105 aa0.63□□□□□ -2.31
RNU6-840P-201ENST00000517275 C10orf82Q8WW14 230 aa0.63□□□□□ -2.31
RNU6-840P-201ENST00000517275 LSM10Q969L4 123 aaKnown RBP0.63□□□□□ -2.31
RNU6-840P-201ENST00000517275 Q96NJ1 140 aa0.63□□□□□ -2.31
RNU6-840P-201ENST00000517275 FAM103A1Q9BTL3 118 aaKnown RBP0.63□□□□□ -2.31
RNU6-840P-201ENST00000517275 PDCD10Q9BUL8 212 aa0.63□□□□□ -2.31
RNU6-840P-201ENST00000517275 MBD5Q9P267 1494 aa0.62□□□□□ -2.31
RNU6-840P-201ENST00000517275 LOC100130705A0A1B0GUX0 176 aa0.62□□□□□ -2.31
RNU6-840P-201ENST00000517275 SPAARA0A1B0GVQ0 90 aa0.62□□□□□ -2.31
RNU6-840P-201ENST00000517275 SIX6O95475 246 aa0.62□□□□□ -2.31
RNU6-840P-201ENST00000517275 Q56UQ5 140 aa0.62□□□□□ -2.31
RNU6-840P-201ENST00000517275 Q8N8P6 123 aa0.62□□□□□ -2.31
RNU6-840P-201ENST00000517275 PP6455Q8WZ26 134 aa0.62□□□□□ -2.31
RNU6-840P-201ENST00000517275 C2orf88Q9BSF0 95 aa0.62□□□□□ -2.31
RNU6-840P-201ENST00000517275 V9GYV3 84 aa0.62□□□□□ -2.31
RNU6-840P-201ENST00000517275 ABCA1O95477 2261 aa0.62□□□□□ -2.31
RNU6-840P-201ENST00000517275 MED13LQ71F56 2210 aa0.61□□□□□ -2.31
RNU6-840P-201ENST00000517275 ROCK2O75116 1388 aaKnown RBP0.61□□□□□ -2.31
RNU6-840P-201ENST00000517275 MUC22E2RYF6 1773 aaPredicted RBP0.61□□□□□ -2.31
RNU6-840P-201ENST00000517275 TRBV10-3A0A0K0K1G6 114 aa0.61□□□□□ -2.31
RNU6-840P-201ENST00000517275 A0A1B0GV90 55 aa0.61□□□□□ -2.31
RNU6-840P-201ENST00000517275 NCOA3Q9Y6Q9 1424 aa0.61□□□□□ -2.31
RNU6-840P-201ENST00000517275 PLXNA1Q9UIW2 1896 aa0.61□□□□□ -2.31
RNU6-840P-201ENST00000517275 CDK13Q14004 1512 aaKnown RBP0.6□□□□□ -2.31
RNU6-840P-201ENST00000517275 GVQW2A0A096LPI5 108 aaPredicted RBP0.6□□□□□ -2.31
RNU6-840P-201ENST00000517275 PIGBOS1A0A0B4J2F0 54 aa0.6□□□□□ -2.31
RNU6-840P-201ENST00000517275 EDDM3BP56851 147 aa0.6□□□□□ -2.31
RNU6-840P-201ENST00000517275 SPINK7P58062 85 aa0.6□□□□□ -2.31
RNU6-840P-201ENST00000517275 Q5VV11 94 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms