RNA–Protein interactions for RNA: ENST00000515588.1

SERF1B-208, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2 BASIC

Gene SERF1B, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-208ENST00000515588 BTF3P20290 206 aaKnown RBP10.69□□□□□ -0.7
SERF1B-208ENST00000515588 ZFP82Q8N141 532 aa10.69□□□□□ -0.7
SERF1B-208ENST00000515588 OR10AG1Q8NH19 301 aa10.69□□□□□ -0.7
SERF1B-208ENST00000515588 SSBP4Q9BWG4 385 aaPredicted RBP10.69□□□□□ -0.7
SERF1B-208ENST00000515588 MED9Q9NWA0 146 aa10.69□□□□□ -0.7
SERF1B-208ENST00000515588 LY96Q9Y6Y9 160 aa10.69□□□□□ -0.7
SERF1B-208ENST00000515588 GAGE12JA6NER3 117 aa10.68□□□□□ -0.7
SERF1B-208ENST00000515588 SNAI2O43623 268 aa10.68□□□□□ -0.7
SERF1B-208ENST00000515588 GAGE1Q13065 139 aa10.68□□□□□ -0.7
SERF1B-208ENST00000515588 GAGE4Q13068 117 aa10.68□□□□□ -0.7
SERF1B-208ENST00000515588 GAGE5Q13069 117 aa10.68□□□□□ -0.7
SERF1B-208ENST00000515588 GAGE13Q4V321 117 aa10.68□□□□□ -0.7
SERF1B-208ENST00000515588 FAM74A4Q5TZK3 123 aa10.68□□□□□ -0.7
SERF1B-208ENST00000515588 MUC21A0A0G2JKD1 596 aa10.67□□□□□ -0.7
SERF1B-208ENST00000515588 MUC21A0A140T8X8 626 aa10.67□□□□□ -0.7
SERF1B-208ENST00000515588 C19orf71A6NCJ1 209 aa10.67□□□□□ -0.7
SERF1B-208ENST00000515588 RHODO00212 210 aa10.67□□□□□ -0.7
SERF1B-208ENST00000515588 GNG4P50150 75 aa10.67□□□□□ -0.7
SERF1B-208ENST00000515588 ATP6V0E2Q8NHE4 81 aa10.67□□□□□ -0.7
SERF1B-208ENST00000515588 LYPD6BQ8NI32 183 aa10.67□□□□□ -0.7
SERF1B-208ENST00000515588 GTSF1LQ9H1H1 148 aa10.67□□□□□ -0.7
SERF1B-208ENST00000515588 LRP1BQ9NZR2 4599 aa10.67□□□□□ -0.7
SERF1B-208ENST00000515588 OR5AL1P0C617 328 aa10.66□□□□□ -0.7
SERF1B-208ENST00000515588 TAGLN2P37802 199 aaKnown RBP10.66□□□□□ -0.7
SERF1B-208ENST00000515588 BLOC1S1P78537 153 aa10.66□□□□□ -0.7
SERF1B-208ENST00000515588 SMIM12Q96EX1 92 aa10.66□□□□□ -0.7
SERF1B-208ENST00000515588 GZMBP10144 247 aa10.65□□□□□ -0.7
SERF1B-208ENST00000515588 EVI2AP22794 236 aa10.65□□□□□ -0.7
SERF1B-208ENST00000515588 LELP1Q5T871 98 aa10.65□□□□□ -0.7
SERF1B-208ENST00000515588 TRAV9-2A0A087WT02 112 aa10.64□□□□□ -0.71
SERF1B-208ENST00000515588 IGHV3-38A0A0C4DH36 116 aa10.64□□□□□ -0.71
SERF1B-208ENST00000515588 OR10J3Q5JRS4 329 aa10.64□□□□□ -0.71
SERF1B-208ENST00000515588 OR2D3Q8NGH3 330 aa10.64□□□□□ -0.71
SERF1B-208ENST00000515588 TRAV8-6A0A0B4J262 113 aa10.63□□□□□ -0.71
SERF1B-208ENST00000515588 RBFOX3A6NFN3 312 aa10.63□□□□□ -0.71
SERF1B-208ENST00000515588 K7EP13 123 aa10.63□□□□□ -0.71
SERF1B-208ENST00000515588 IGLC6P0CF74 106 aa10.63□□□□□ -0.71
SERF1B-208ENST00000515588 SSTP61278 116 aa10.63□□□□□ -0.71
SERF1B-208ENST00000515588 LINC01556Q5JQF7 62 aa10.63□□□□□ -0.71
SERF1B-208ENST00000515588 SPANXN1Q5VSR9 72 aa10.63□□□□□ -0.71
SERF1B-208ENST00000515588 DAZAP1Q96EP5 407 aaKnown RBP10.63□□□□□ -0.71
SERF1B-208ENST00000515588 MSRB1Q9NZV6 116 aa10.63□□□□□ -0.71
SERF1B-208ENST00000515588 DNAH5Q8TE73 4624 aa10.62□□□□□ -0.71
SERF1B-208ENST00000515588 Q8N3U1 123 aa10.62□□□□□ -0.71
SERF1B-208ENST00000515588 K7EN84 100 aa10.61□□□□□ -0.71
SERF1B-208ENST00000515588 P01737 135 aa10.61□□□□□ -0.71
SERF1B-208ENST00000515588 KRTAP10-2P60368 255 aa10.61□□□□□ -0.71
SERF1B-208ENST00000515588 RPS20P60866 119 aaKnown RBP10.61□□□□□ -0.71
SERF1B-208ENST00000515588 FER1L6-AS1Q8NA97 138 aa10.61□□□□□ -0.71
SERF1B-208ENST00000515588 OCC1Q8TAD7 63 aa10.61□□□□□ -0.71
SERF1B-208ENST00000515588 KIF25-AS1Q9Y6Z4 181 aa10.61□□□□□ -0.71
SERF1B-208ENST00000515588 TRBV10-1A0A0K0K1A3 114 aa10.6□□□□□ -0.71
SERF1B-208ENST00000515588 TMEM250H0YL14 139 aa10.6□□□□□ -0.71
SERF1B-208ENST00000515588 RAB4BP61018 213 aa10.6□□□□□ -0.71
SERF1B-208ENST00000515588 SPATA12Q7Z6I5 190 aa10.6□□□□□ -0.71
SERF1B-208ENST00000515588 NFE4Q86UQ8 179 aa10.6□□□□□ -0.71
SERF1B-208ENST00000515588 C10orf126Q8N4M7 172 aa10.6□□□□□ -0.71
SERF1B-208ENST00000515588 NUDT10Q8NFP7 164 aa10.6□□□□□ -0.71
SERF1B-208ENST00000515588 NUDT11Q96G61 164 aa10.6□□□□□ -0.71
SERF1B-208ENST00000515588 TPPP3Q9BW30 176 aa10.6□□□□□ -0.71
SERF1B-208ENST00000515588 C16orf90A8MZG2 172 aa10.59□□□□□ -0.71
SERF1B-208ENST00000515588 IBA57-AS1B1ANH7 110 aa10.59□□□□□ -0.71
SERF1B-208ENST00000515588 IGHV3-30P01768 117 aa10.59□□□□□ -0.71
SERF1B-208ENST00000515588 IGHV3-33P01772 117 aa10.59□□□□□ -0.71
SERF1B-208ENST00000515588 IGHV3-30-3P0DP02 117 aa10.59□□□□□ -0.71
SERF1B-208ENST00000515588 IGHV3-30-5P0DP03 117 aa10.59□□□□□ -0.71
SERF1B-208ENST00000515588 ZNF56Q15929 161 aa10.59□□□□□ -0.71
SERF1B-208ENST00000515588 TOR2AQ5JU69 321 aa10.59□□□□□ -0.71
SERF1B-208ENST00000515588 RNASE7Q9H1E1 156 aaKnown RBP10.59□□□□□ -0.71
SERF1B-208ENST00000515588 BIN3Q9NQY0 253 aa10.59□□□□□ -0.71
SERF1B-208ENST00000515588 RYR1P21817 5038 aa10.58□□□□□ -0.72
SERF1B-208ENST00000515588 TRBV7-3A0A075B6L6 115 aa10.58□□□□□ -0.72
SERF1B-208ENST00000515588 UBE2D3P61077 147 aa10.58□□□□□ -0.72
SERF1B-208ENST00000515588 UBE2D2P62837 147 aa10.58□□□□□ -0.72
SERF1B-208ENST00000515588 NEXN-AS1Q8NBZ9 246 aa10.58□□□□□ -0.72
SERF1B-208ENST00000515588 OR10G8Q8NGN5 311 aa10.58□□□□□ -0.72
SERF1B-208ENST00000515588 A0A087WWC5 75 aa10.57□□□□□ -0.72
SERF1B-208ENST00000515588 XKRY2A2RUG3 117 aa10.57□□□□□ -0.72
SERF1B-208ENST00000515588 RPL36AP83881 106 aaKnown RBP10.57□□□□□ -0.72
SERF1B-208ENST00000515588 LYZL1Q6UWQ5 148 aa10.57□□□□□ -0.72
SERF1B-208ENST00000515588 RPL36ALQ969Q0 106 aaKnown RBP10.57□□□□□ -0.72
SERF1B-208ENST00000515588 AP1S3Q96PC3 154 aa10.57□□□□□ -0.72
SERF1B-208ENST00000515588 HSPG2P98160 4391 aa10.56□□□□□ -0.72
SERF1B-208ENST00000515588 F2Z2F3 143 aa10.56□□□□□ -0.72
SERF1B-208ENST00000515588 F5H697 171 aa10.56□□□□□ -0.72
SERF1B-208ENST00000515588 CEBPGP53567 150 aa10.56□□□□□ -0.72
SERF1B-208ENST00000515588 CACNG7P62955 275 aa10.56□□□□□ -0.72
SERF1B-208ENST00000515588 FAM210AQ96ND0 272 aa10.56□□□□□ -0.72
SERF1B-208ENST00000515588 EIF5A2Q9GZV4 153 aaKnown RBP10.56□□□□□ -0.72
SERF1B-208ENST00000515588 RPP21Q9H633 154 aaKnown RBP10.56□□□□□ -0.72
SERF1B-208ENST00000515588 APOBP04114 4563 aaKnown RBP10.56□□□□□ -0.72
SERF1B-208ENST00000515588 A0A087WTM6 91 aa10.55□□□□□ -0.72
SERF1B-208ENST00000515588 FUSP35637 526 aaKnown RBP eCLIP10.55□□□□□ -0.72
SERF1B-208ENST00000515588 CTRLP40313 264 aa10.55□□□□□ -0.72
SERF1B-208ENST00000515588 NDUFS6O75380 124 aaKnown RBP10.54□□□□□ -0.72
SERF1B-208ENST00000515588 SRP19P09132 144 aaKnown RBP10.54□□□□□ -0.72
SERF1B-208ENST00000515588 SMIM17P0DL12 118 aa10.54□□□□□ -0.72
SERF1B-208ENST00000515588 NTF3P20783 257 aa10.54□□□□□ -0.72
SERF1B-208ENST00000515588 ERVFC1-1P60608 527 aa10.54□□□□□ -0.72
SERF1B-208ENST00000515588 DAZ4Q86SG3 579 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms