RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 SCRT2Q9NQ03 307 aa7.78□□□□□ -1.16
VCAN-212ENST00000515397 MANBALQ9NQG1 85 aa7.78□□□□□ -1.16
VCAN-212ENST00000515397 CIDEAO60543 219 aa7.77□□□□□ -1.17
VCAN-212ENST00000515397 DNAH10OSP0CZ25 163 aa7.77□□□□□ -1.17
VCAN-212ENST00000515397 EVI2AP22794 236 aa7.77□□□□□ -1.17
VCAN-212ENST00000515397 CENPWQ5EE01 88 aa7.77□□□□□ -1.17
VCAN-212ENST00000515397 ALKAL2Q6UX46 152 aa7.77□□□□□ -1.17
VCAN-212ENST00000515397 ZFP2Q6ZN57 461 aa7.77□□□□□ -1.17
VCAN-212ENST00000515397 SFRP2Q96HF1 295 aa7.77□□□□□ -1.17
VCAN-212ENST00000515397 MED9Q9NWA0 146 aa7.77□□□□□ -1.17
VCAN-212ENST00000515397 LRP1BQ9NZR2 4599 aa7.77□□□□□ -1.17
VCAN-212ENST00000515397 TRAV9-2A0A087WT02 112 aa7.76□□□□□ -1.17
VCAN-212ENST00000515397 IGHV3-38A0A0C4DH36 116 aa7.76□□□□□ -1.17
VCAN-212ENST00000515397 RBFOX3A6NFN3 312 aa7.76□□□□□ -1.17
VCAN-212ENST00000515397 TEX46H3BTG2 121 aa7.76□□□□□ -1.17
VCAN-212ENST00000515397 IGLV2-8P01709 118 aa7.76□□□□□ -1.17
VCAN-212ENST00000515397 MED14OSP0DP75 135 aa7.76□□□□□ -1.17
VCAN-212ENST00000515397 SH2D6Q7Z4S9 175 aa7.76□□□□□ -1.17
VCAN-212ENST00000515397 ZFP82Q8N141 532 aa7.76□□□□□ -1.17
VCAN-212ENST00000515397 C11orf52Q96A22 123 aa7.76□□□□□ -1.17
VCAN-212ENST00000515397 TPPP3Q9BW30 176 aa7.76□□□□□ -1.17
VCAN-212ENST00000515397 GTSF1LQ9H1H1 148 aa7.76□□□□□ -1.17
VCAN-212ENST00000515397 MSRB1Q9NZV6 116 aa7.76□□□□□ -1.17
VCAN-212ENST00000515397 TRAV8-6A0A0B4J262 113 aa7.75□□□□□ -1.17
VCAN-212ENST00000515397 BCL2P10415 239 aa7.75□□□□□ -1.17
VCAN-212ENST00000515397 TIRAPP58753 221 aa7.75□□□□□ -1.17
VCAN-212ENST00000515397 MEF2BQ02080 365 aaPredicted RBP7.75□□□□□ -1.17
VCAN-212ENST00000515397 PIK3CD-AS1Q5SR53 167 aa7.75□□□□□ -1.17
VCAN-212ENST00000515397 LELP1Q5T871 98 aa7.75□□□□□ -1.17
VCAN-212ENST00000515397 Q9HAA7 133 aa7.75□□□□□ -1.17
VCAN-212ENST00000515397 TRBV20OR9-2A0A075B6H5 130 aa7.74□□□□□ -1.17
VCAN-212ENST00000515397 GNG4P50150 75 aa7.74□□□□□ -1.17
VCAN-212ENST00000515397 SPANXN1Q5VSR9 72 aa7.74□□□□□ -1.17
VCAN-212ENST00000515397 OR2D3Q8NGH3 330 aa7.74□□□□□ -1.17
VCAN-212ENST00000515397 VAX2Q9UIW0 290 aa7.74□□□□□ -1.17
VCAN-212ENST00000515397 DNAH5Q8TE73 4624 aa7.74□□□□□ -1.17
VCAN-212ENST00000515397 RHODO00212 210 aa7.73□□□□□ -1.17
VCAN-212ENST00000515397 IFNA1P01562 189 aa7.73□□□□□ -1.17
VCAN-212ENST00000515397 LINC00694P0DN24 101 aa7.73□□□□□ -1.17
VCAN-212ENST00000515397 BTF3P20290 206 aaKnown RBP7.73□□□□□ -1.17
VCAN-212ENST00000515397 DAZAP1Q96EP5 407 aaKnown RBP7.73□□□□□ -1.17
VCAN-212ENST00000515397 C19orf71A6NCJ1 209 aa7.72□□□□□ -1.17
VCAN-212ENST00000515397 SNAI2O43623 268 aa7.72□□□□□ -1.17
VCAN-212ENST00000515397 PDE6DO43924 150 aa7.72□□□□□ -1.17
VCAN-212ENST00000515397 ZNF56Q15929 161 aa7.72□□□□□ -1.17
VCAN-212ENST00000515397 LINC01556Q5JQF7 62 aa7.72□□□□□ -1.17
VCAN-212ENST00000515397 NFE4Q86UQ8 179 aa7.72□□□□□ -1.17
VCAN-212ENST00000515397 SSBP4Q9BWG4 385 aaPredicted RBP7.72□□□□□ -1.17
VCAN-212ENST00000515397 RYR1P21817 5038 aa7.72□□□□□ -1.17
VCAN-212ENST00000515397 A0A087WTM6 91 aa7.71□□□□□ -1.18
VCAN-212ENST00000515397 IBA57-AS1B1ANH7 110 aa7.71□□□□□ -1.18
VCAN-212ENST00000515397 F5H697 171 aa7.71□□□□□ -1.18
VCAN-212ENST00000515397 CEBPGP53567 150 aa7.71□□□□□ -1.18
VCAN-212ENST00000515397 DAZ4Q86SG3 579 aaKnown RBP7.71□□□□□ -1.18
VCAN-212ENST00000515397 NUDT10Q8NFP7 164 aa7.71□□□□□ -1.18
VCAN-212ENST00000515397 NUDT11Q96G61 164 aa7.71□□□□□ -1.18
VCAN-212ENST00000515397 DNAJC30Q96LL9 226 aa7.71□□□□□ -1.18
VCAN-212ENST00000515397 KRTAP4-5Q9BYR2 181 aa7.71□□□□□ -1.18
VCAN-212ENST00000515397 DAZ3Q9NR90 486 aaKnown RBP7.71□□□□□ -1.18
VCAN-212ENST00000515397 K7EN84 100 aa7.7□□□□□ -1.18
VCAN-212ENST00000515397 P01737 135 aa7.7□□□□□ -1.18
VCAN-212ENST00000515397 CXCL1P09341 107 aa7.7□□□□□ -1.18
VCAN-212ENST00000515397 OR5AL1P0C617 328 aa7.7□□□□□ -1.18
VCAN-212ENST00000515397 ERVFC1-1P60608 527 aa7.7□□□□□ -1.18
VCAN-212ENST00000515397 BLOC1S1P78537 153 aa7.7□□□□□ -1.18
VCAN-212ENST00000515397 C10orf126Q8N4M7 172 aa7.7□□□□□ -1.18
VCAN-212ENST00000515397 FER1L6-AS1Q8NA97 138 aa7.7□□□□□ -1.18
VCAN-212ENST00000515397 NEXN-AS1Q8NBZ9 246 aa7.7□□□□□ -1.18
VCAN-212ENST00000515397 OCC1Q8TAD7 63 aa7.7□□□□□ -1.18
VCAN-212ENST00000515397 RNASE7Q9H1E1 156 aaKnown RBP7.7□□□□□ -1.18
VCAN-212ENST00000515397 EREGO14944 169 aa7.69□□□□□ -1.18
VCAN-212ENST00000515397 PSCAO43653 123 aa7.69□□□□□ -1.18
VCAN-212ENST00000515397 IGLC6P0CF74 106 aa7.69□□□□□ -1.18
VCAN-212ENST00000515397 RAB4BP61018 213 aa7.69□□□□□ -1.18
VCAN-212ENST00000515397 UBE2D3P61077 147 aa7.69□□□□□ -1.18
VCAN-212ENST00000515397 UBE2D2P62837 147 aa7.69□□□□□ -1.18
VCAN-212ENST00000515397 RPL36AP83881 106 aaKnown RBP7.69□□□□□ -1.18
VCAN-212ENST00000515397 LYZL1Q6UWQ5 148 aa7.69□□□□□ -1.18
VCAN-212ENST00000515397 DEFB104AQ8WTQ1 72 aa7.69□□□□□ -1.18
VCAN-212ENST00000515397 RPL36ALQ969Q0 106 aaKnown RBP7.69□□□□□ -1.18
VCAN-212ENST00000515397 KIF25-AS1Q9Y6Z4 181 aa7.69□□□□□ -1.18
VCAN-212ENST00000515397 HSPG2P98160 4391 aa7.68□□□□□ -1.18
VCAN-212ENST00000515397 TRBV7-3A0A075B6L6 115 aa7.68□□□□□ -1.18
VCAN-212ENST00000515397 MGPP08493 103 aa7.68□□□□□ -1.18
VCAN-212ENST00000515397 SMIM17P0DL12 118 aa7.68□□□□□ -1.18
VCAN-212ENST00000515397 TOR2AQ5JU69 321 aa7.68□□□□□ -1.18
VCAN-212ENST00000515397 PCLOQ9Y6V0 5065 aa7.68□□□□□ -1.18
VCAN-212ENST00000515397 A0A087WWC5 75 aa7.67□□□□□ -1.18
VCAN-212ENST00000515397 TRBV10-1A0A0K0K1A3 114 aa7.67□□□□□ -1.18
VCAN-212ENST00000515397 LRCOL1A6NCL2 159 aa7.67□□□□□ -1.18
VCAN-212ENST00000515397 TMEM262E9PQX1 116 aa7.67□□□□□ -1.18
VCAN-212ENST00000515397 K7EP13 123 aa7.67□□□□□ -1.18
VCAN-212ENST00000515397 LECT2O14960 151 aa7.67□□□□□ -1.18
VCAN-212ENST00000515397 RPS20P60866 119 aaKnown RBP7.67□□□□□ -1.18
VCAN-212ENST00000515397 WFDC2Q14508 124 aa7.67□□□□□ -1.18
VCAN-212ENST00000515397 NIT1Q86X76 327 aa7.67□□□□□ -1.18
VCAN-212ENST00000515397 LYPD6BQ8NI32 183 aa7.67□□□□□ -1.18
VCAN-212ENST00000515397 PGPEP1Q9NXJ5 209 aa7.67□□□□□ -1.18
VCAN-212ENST00000515397 KLK12Q9UKR0 248 aa7.67□□□□□ -1.18
VCAN-212ENST00000515397 APOBP04114 4563 aaKnown RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms