RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 KIF25-AS1Q9Y6Z4 181 aa8.47□□□□□ -1.05
PDLIM5-220ENST00000514830 DNAH7Q8WXX0 4024 aa8.46□□□□□ -1.05
PDLIM5-220ENST00000514830 S100A8P05109 93 aa8.46□□□□□ -1.06
PDLIM5-220ENST00000514830 CRYGDP07320 174 aa8.46□□□□□ -1.06
PDLIM5-220ENST00000514830 S100PP25815 95 aa8.46□□□□□ -1.06
PDLIM5-220ENST00000514830 FAM3BP58499 235 aaPredicted RBP8.46□□□□□ -1.06
PDLIM5-220ENST00000514830 OR4C5Q8NGB2 326 aa8.46□□□□□ -1.06
PDLIM5-220ENST00000514830 FRZBQ92765 325 aa8.46□□□□□ -1.06
PDLIM5-220ENST00000514830 MSRB1Q9NZV6 116 aa8.46□□□□□ -1.06
PDLIM5-220ENST00000514830 MUC21A0A0G2JKD1 596 aa8.45□□□□□ -1.06
PDLIM5-220ENST00000514830 MUC21A0A140T8X8 626 aa8.45□□□□□ -1.06
PDLIM5-220ENST00000514830 NANOS2P60321 138 aaKnown RBP8.45□□□□□ -1.06
PDLIM5-220ENST00000514830 SLAQ13239 276 aa8.45□□□□□ -1.06
PDLIM5-220ENST00000514830 TWIST1Q15672 202 aa8.45□□□□□ -1.06
PDLIM5-220ENST00000514830 Q6ZTC4 211 aa8.45□□□□□ -1.06
PDLIM5-220ENST00000514830 TMEM191AQ9H0A3 160 aa8.45□□□□□ -1.06
PDLIM5-220ENST00000514830 TRBV24-1A0A075B6N3 115 aa8.44□□□□□ -1.06
PDLIM5-220ENST00000514830 TRAV10A0A0B4J240 114 aa8.44□□□□□ -1.06
PDLIM5-220ENST00000514830 LINC00315P59091 139 aa8.44□□□□□ -1.06
PDLIM5-220ENST00000514830 HBBP68871 147 aa8.44□□□□□ -1.06
PDLIM5-220ENST00000514830 FHL2Q14192 279 aa8.44□□□□□ -1.06
PDLIM5-220ENST00000514830 SMIM15Q7Z3B0 74 aa8.44□□□□□ -1.06
PDLIM5-220ENST00000514830 ZNF479Q96JC4 524 aa8.44□□□□□ -1.06
PDLIM5-220ENST00000514830 FAM210BQ96KR6 192 aa8.44□□□□□ -1.06
PDLIM5-220ENST00000514830 YPEL4Q96NS1 127 aa8.44□□□□□ -1.06
PDLIM5-220ENST00000514830 DPH3P1Q9H4G8 78 aa8.44□□□□□ -1.06
PDLIM5-220ENST00000514830 JPT2Q9H910 190 aa8.44□□□□□ -1.06
PDLIM5-220ENST00000514830 SMCO4Q9NRQ5 59 aa8.44□□□□□ -1.06
PDLIM5-220ENST00000514830 H3BNG1 76 aa8.43□□□□□ -1.06
PDLIM5-220ENST00000514830 IGHV3-53P01767 116 aa8.43□□□□□ -1.06
PDLIM5-220ENST00000514830 SMIM17P0DL12 118 aa8.43□□□□□ -1.06
PDLIM5-220ENST00000514830 GATA1P15976 413 aaPredicted RBP8.43□□□□□ -1.06
PDLIM5-220ENST00000514830 EVI2AP22794 236 aa8.43□□□□□ -1.06
PDLIM5-220ENST00000514830 RAB4BP61018 213 aa8.43□□□□□ -1.06
PDLIM5-220ENST00000514830 ELOBQ15370 118 aa8.43□□□□□ -1.06
PDLIM5-220ENST00000514830 COX19Q49B96 90 aa8.43□□□□□ -1.06
PDLIM5-220ENST00000514830 SAMD10Q9BYL1 202 aa8.43□□□□□ -1.06
PDLIM5-220ENST00000514830 DEFB131BA0A096LNP1 70 aa8.42□□□□□ -1.06
PDLIM5-220ENST00000514830 TRBV6-4A0A1B0GX49 114 aa8.42□□□□□ -1.06
PDLIM5-220ENST00000514830 HOXA5P20719 270 aa8.42□□□□□ -1.06
PDLIM5-220ENST00000514830 MRPL54Q6P161 138 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-220ENST00000514830 C14orf178Q8N769 122 aaPredicted RBP8.42□□□□□ -1.06
PDLIM5-220ENST00000514830 PRO0255Q9UI72 69 aa8.42□□□□□ -1.06
PDLIM5-220ENST00000514830 A0A087WWL8 130 aa8.41□□□□□ -1.06
PDLIM5-220ENST00000514830 TRGV4A0A0C4DH28 118 aa8.41□□□□□ -1.06
PDLIM5-220ENST00000514830 PHLDA1Q8WV24 401 aaPredicted RBP8.41□□□□□ -1.06
PDLIM5-220ENST00000514830 URGCP-MRPS24S4R325 110 aa8.41□□□□□ -1.06
PDLIM5-220ENST00000514830 RYR3Q15413 4870 aa8.4□□□□□ -1.06
PDLIM5-220ENST00000514830 CSMD3Q7Z407 3707 aa8.4□□□□□ -1.06
PDLIM5-220ENST00000514830 TRBV10-1A0A0K0K1A3 114 aa8.4□□□□□ -1.06
PDLIM5-220ENST00000514830 NUPR2A6NF83 97 aa8.4□□□□□ -1.06
PDLIM5-220ENST00000514830 CAMPP49913 170 aa8.4□□□□□ -1.06
PDLIM5-220ENST00000514830 CRYBA4P53673 196 aa8.4□□□□□ -1.06
PDLIM5-220ENST00000514830 SSTP61278 116 aa8.4□□□□□ -1.06
PDLIM5-220ENST00000514830 FAM74A4Q5TZK3 123 aa8.4□□□□□ -1.06
PDLIM5-220ENST00000514830 FAM104BQ5XKR9 115 aa8.4□□□□□ -1.06
PDLIM5-220ENST00000514830 CBLN2Q8IUK8 224 aa8.4□□□□□ -1.06
PDLIM5-220ENST00000514830 MUC7Q8TAX7 377 aa8.4□□□□□ -1.06
PDLIM5-220ENST00000514830 GNB1LQ9BYB4 327 aa8.4□□□□□ -1.06
PDLIM5-220ENST00000514830 HHLA3Q9XRX5 114 aa8.4□□□□□ -1.06
PDLIM5-220ENST00000514830 F5H768 121 aa8.39□□□□□ -1.07
PDLIM5-220ENST00000514830 H7C1H1 209 aa8.39□□□□□ -1.07
PDLIM5-220ENST00000514830 MT-ND6P03923 174 aa8.39□□□□□ -1.07
PDLIM5-220ENST00000514830 RAB4AP20338 218 aa8.39□□□□□ -1.07
PDLIM5-220ENST00000514830 TCTAP57738 103 aa8.39□□□□□ -1.07
PDLIM5-220ENST00000514830 RHOHQ15669 191 aa8.39□□□□□ -1.07
PDLIM5-220ENST00000514830 CEMP1Q6PRD7 247 aaPredicted RBP8.39□□□□□ -1.07
PDLIM5-220ENST00000514830 SLC25A29Q8N8R3 303 aa8.39□□□□□ -1.07
PDLIM5-220ENST00000514830 MRAP2Q96G30 205 aa8.39□□□□□ -1.07
PDLIM5-220ENST00000514830 RNF185Q96GF1 192 aa8.39□□□□□ -1.07
PDLIM5-220ENST00000514830 K7EQD1 137 aa8.38□□□□□ -1.07
PDLIM5-220ENST00000514830 M0QY20 66 aa8.38□□□□□ -1.07
PDLIM5-220ENST00000514830 HLA-DQA1P01909 254 aa8.38□□□□□ -1.07
PDLIM5-220ENST00000514830 ZNF56Q15929 161 aa8.38□□□□□ -1.07
PDLIM5-220ENST00000514830 TMEM88Q6PEY1 159 aa8.38□□□□□ -1.07
PDLIM5-220ENST00000514830 TMEM136Q6ZRR5 245 aa8.38□□□□□ -1.07
PDLIM5-220ENST00000514830 Q6ZSN1 163 aa8.38□□□□□ -1.07
PDLIM5-220ENST00000514830 VSIG2Q96IQ7 327 aa8.38□□□□□ -1.07
PDLIM5-220ENST00000514830 DYNC2H1Q8NCM8 4307 aaKnown RBP8.38□□□□□ -1.07
PDLIM5-220ENST00000514830 TENM2Q9NT68 2774 aa8.37□□□□□ -1.07
PDLIM5-220ENST00000514830 TRAV26-1A0A087WT03 109 aa8.37□□□□□ -1.07
PDLIM5-220ENST00000514830 TGIF2-C20orf24A0A0A6YYL0 155 aa8.37□□□□□ -1.07
PDLIM5-220ENST00000514830 IGHV3-73A0A0B4J1V6 119 aa8.37□□□□□ -1.07
PDLIM5-220ENST00000514830 PAX4O43316 350 aa8.37□□□□□ -1.07
PDLIM5-220ENST00000514830 PPBPP02775 128 aa8.37□□□□□ -1.07
PDLIM5-220ENST00000514830 HTN3P15516 51 aa8.37□□□□□ -1.07
PDLIM5-220ENST00000514830 CASC10Q5T4H9 136 aa8.37□□□□□ -1.07
PDLIM5-220ENST00000514830 SUMO4Q6EEV6 95 aa8.37□□□□□ -1.07
PDLIM5-220ENST00000514830 AMN1Q8IY45 258 aa8.37□□□□□ -1.07
PDLIM5-220ENST00000514830 C15orf53Q8NAA6 179 aa8.37□□□□□ -1.07
PDLIM5-220ENST00000514830 DNAJC30Q96LL9 226 aa8.37□□□□□ -1.07
PDLIM5-220ENST00000514830 PRADC1Q9BSG0 188 aa8.37□□□□□ -1.07
PDLIM5-220ENST00000514830 KLK5Q9Y337 293 aaPredicted RBP8.37□□□□□ -1.07
PDLIM5-220ENST00000514830 F5H697 171 aa8.36□□□□□ -1.07
PDLIM5-220ENST00000514830 PPP1R17O96001 155 aa8.36□□□□□ -1.07
PDLIM5-220ENST00000514830 MGPP08493 103 aa8.36□□□□□ -1.07
PDLIM5-220ENST00000514830 LINC00694P0DN24 101 aa8.36□□□□□ -1.07
PDLIM5-220ENST00000514830 MRPL51Q4U2R6 128 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-220ENST00000514830 SH2D6Q7Z4S9 175 aa8.36□□□□□ -1.07
PDLIM5-220ENST00000514830 TRBV6-5A0A0K0K1A5 114 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms