RNA–Protein interactions for RNA: ENST00000513664.1

PDGFC-209, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-209ENST00000513664 GFRA4Q9GZZ7 299 aa6.61□□□□□ -1.35
PDGFC-209ENST00000513664 MUC4Q99102 2169 aa6.61□□□□□ -1.35
PDGFC-209ENST00000513664 PLECQ15149 4684 aaKnown RBP6.6□□□□□ -1.35
PDGFC-209ENST00000513664 KMT2CQ8NEZ4 4911 aaKnown RBP6.6□□□□□ -1.35
PDGFC-209ENST00000513664 A0A096LPF7 62 aa6.6□□□□□ -1.35
PDGFC-209ENST00000513664 TRGC1P0CF51 173 aa6.6□□□□□ -1.35
PDGFC-209ENST00000513664 SRIP30626 198 aa6.6□□□□□ -1.35
PDGFC-209ENST00000513664 FOXA3P55318 350 aaPredicted RBP6.6□□□□□ -1.35
PDGFC-209ENST00000513664 FAM74A4Q5TZK3 123 aa6.6□□□□□ -1.35
PDGFC-209ENST00000513664 UFSP1Q6NVU6 142 aa6.6□□□□□ -1.35
PDGFC-209ENST00000513664 LYZL1Q6UWQ5 148 aa6.6□□□□□ -1.35
PDGFC-209ENST00000513664 NEGR1Q7Z3B1 354 aa6.6□□□□□ -1.35
PDGFC-209ENST00000513664 SLC25A29Q8N8R3 303 aa6.6□□□□□ -1.35
PDGFC-209ENST00000513664 TSKUQ8WUA8 353 aa6.6□□□□□ -1.35
PDGFC-209ENST00000513664 BORCS7Q96B45 105 aa6.6□□□□□ -1.35
PDGFC-209ENST00000513664 IGHV3-73A0A0B4J1V6 119 aa6.59□□□□□ -1.35
PDGFC-209ENST00000513664 TRBV10-1A0A0K0K1A3 114 aa6.59□□□□□ -1.35
PDGFC-209ENST00000513664 K7EQD1 137 aa6.59□□□□□ -1.35
PDGFC-209ENST00000513664 PPP1R2P9O14990 202 aa6.59□□□□□ -1.35
PDGFC-209ENST00000513664 CRYGDP07320 174 aa6.59□□□□□ -1.35
PDGFC-209ENST00000513664 GYPEP15421 78 aa6.59□□□□□ -1.35
PDGFC-209ENST00000513664 RAB4BP61018 213 aa6.59□□□□□ -1.35
PDGFC-209ENST00000513664 SMIM15Q7Z3B0 74 aa6.59□□□□□ -1.35
PDGFC-209ENST00000513664 OR10G8Q8NGN5 311 aa6.59□□□□□ -1.35
PDGFC-209ENST00000513664 JPT2Q9H910 190 aa6.59□□□□□ -1.35
PDGFC-209ENST00000513664 ALMS1Q8TCU4 4167 aa6.58□□□□□ -1.36
PDGFC-209ENST00000513664 A0A087WWL8 130 aa6.58□□□□□ -1.36
PDGFC-209ENST00000513664 LINC00862A6NCI5 91 aa6.58□□□□□ -1.36
PDGFC-209ENST00000513664 NTF3P20783 257 aa6.58□□□□□ -1.36
PDGFC-209ENST00000513664 TWIST1Q15672 202 aa6.58□□□□□ -1.36
PDGFC-209ENST00000513664 GTSF1Q8WW33 167 aa6.58□□□□□ -1.36
PDGFC-209ENST00000513664 SAMD10Q9BYL1 202 aa6.58□□□□□ -1.36
PDGFC-209ENST00000513664 V9GYV3 84 aa6.58□□□□□ -1.36
PDGFC-209ENST00000513664 MUC21A0A0G2JKD1 596 aa6.57□□□□□ -1.36
PDGFC-209ENST00000513664 MUC21A0A140T8X8 626 aa6.57□□□□□ -1.36
PDGFC-209ENST00000513664 A0A1B0GUT8 65 aa6.57□□□□□ -1.36
PDGFC-209ENST00000513664 TMEM218A2RU14 115 aa6.57□□□□□ -1.36
PDGFC-209ENST00000513664 HIGD1CA8MV81 97 aa6.57□□□□□ -1.36
PDGFC-209ENST00000513664 H7C1H1 209 aa6.57□□□□□ -1.36
PDGFC-209ENST00000513664 TIRAPP58753 221 aa6.57□□□□□ -1.36
PDGFC-209ENST00000513664 SSTP61278 116 aa6.57□□□□□ -1.36
PDGFC-209ENST00000513664 ZNF56Q15929 161 aa6.57□□□□□ -1.36
PDGFC-209ENST00000513664 COMMD7Q86VX2 200 aa6.57□□□□□ -1.36
PDGFC-209ENST00000513664 C14orf178Q8N769 122 aaPredicted RBP6.57□□□□□ -1.36
PDGFC-209ENST00000513664 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.57□□□□□ -1.36
PDGFC-209ENST00000513664 UPK3BQ9BT76 320 aa6.57□□□□□ -1.36
PDGFC-209ENST00000513664 NAT8BQ9UHF3 227 aa6.57□□□□□ -1.36
PDGFC-209ENST00000513664 F5H697 171 aa6.56□□□□□ -1.36
PDGFC-209ENST00000513664 MT-ND4LP03901 98 aa6.56□□□□□ -1.36
PDGFC-209ENST00000513664 RPL36AP83881 106 aaKnown RBP6.56□□□□□ -1.36
PDGFC-209ENST00000513664 ESRGQ1W209 222 aa6.56□□□□□ -1.36
PDGFC-209ENST00000513664 RPL36ALQ969Q0 106 aaKnown RBP6.56□□□□□ -1.36
PDGFC-209ENST00000513664 ANAPC16Q96DE5 110 aa6.56□□□□□ -1.36
PDGFC-209ENST00000513664 PGLYRP4Q96LB8 373 aa6.56□□□□□ -1.36
PDGFC-209ENST00000513664 SEC11CQ9BY50 192 aa6.56□□□□□ -1.36
PDGFC-209ENST00000513664 DPH3P1Q9H4G8 78 aa6.56□□□□□ -1.36
PDGFC-209ENST00000513664 MRPS16Q9Y3D3 137 aaKnown RBP6.56□□□□□ -1.36
PDGFC-209ENST00000513664 LINC00588Q9Y4M8 146 aa6.56□□□□□ -1.36
PDGFC-209ENST00000513664 DNAH1Q9P2D7 4330 aa6.55□□□□□ -1.36
PDGFC-209ENST00000513664 NACAE9PAV3 2078 aa6.55□□□□□ -1.36
PDGFC-209ENST00000513664 TRBV7-3A0A075B6L6 115 aa6.55□□□□□ -1.36
PDGFC-209ENST00000513664 A0A1B0GW15 77 aa6.55□□□□□ -1.36
PDGFC-209ENST00000513664 SMIM27A0A1W2PRY6 76 aa6.55□□□□□ -1.36
PDGFC-209ENST00000513664 F8W036 122 aa6.55□□□□□ -1.36
PDGFC-209ENST00000513664 EVI2AP22794 236 aa6.55□□□□□ -1.36
PDGFC-209ENST00000513664 RIGQ13278 110 aa6.55□□□□□ -1.36
PDGFC-209ENST00000513664 LYPD5Q6UWN5 251 aa6.55□□□□□ -1.36
PDGFC-209ENST00000513664 Q6ZSN1 163 aa6.55□□□□□ -1.36
PDGFC-209ENST00000513664 ATP6V0E2Q8NHE4 81 aa6.55□□□□□ -1.36
PDGFC-209ENST00000513664 FRZBQ92765 325 aa6.55□□□□□ -1.36
PDGFC-209ENST00000513664 KIF25-AS1Q9Y6Z4 181 aa6.55□□□□□ -1.36
PDGFC-209ENST00000513664 A0A087WWC5 75 aa6.54□□□□□ -1.36
PDGFC-209ENST00000513664 LOC100131303A0A0U1RQF7 123 aa6.54□□□□□ -1.36
PDGFC-209ENST00000513664 K7EP13 123 aa6.54□□□□□ -1.36
PDGFC-209ENST00000513664 S100A8P05109 93 aa6.54□□□□□ -1.36
PDGFC-209ENST00000513664 MGPP08493 103 aa6.54□□□□□ -1.36
PDGFC-209ENST00000513664 TTC32Q5I0X7 151 aa6.54□□□□□ -1.36
PDGFC-209ENST00000513664 NUP35Q8NFH5 326 aa6.54□□□□□ -1.36
PDGFC-209ENST00000513664 ZNRF2Q8NHG8 242 aa6.54□□□□□ -1.36
PDGFC-209ENST00000513664 DNAJC30Q96LL9 226 aa6.54□□□□□ -1.36
PDGFC-209ENST00000513664 GTSF1LQ9H1H1 148 aa6.54□□□□□ -1.36
PDGFC-209ENST00000513664 Q9H8V8 135 aa6.54□□□□□ -1.36
PDGFC-209ENST00000513664 MSRB1Q9NZV6 116 aa6.54□□□□□ -1.36
PDGFC-209ENST00000513664 TRAV8-6A0A0B4J262 113 aa6.53□□□□□ -1.36
PDGFC-209ENST00000513664 GAGE12JA6NER3 117 aa6.53□□□□□ -1.36
PDGFC-209ENST00000513664 LINC00694P0DN24 101 aa6.53□□□□□ -1.36
PDGFC-209ENST00000513664 LINC00315P59091 139 aa6.53□□□□□ -1.36
PDGFC-209ENST00000513664 GAGE1Q13065 139 aa6.53□□□□□ -1.36
PDGFC-209ENST00000513664 GAGE4Q13068 117 aa6.53□□□□□ -1.36
PDGFC-209ENST00000513664 GAGE5Q13069 117 aa6.53□□□□□ -1.36
PDGFC-209ENST00000513664 GAGE13Q4V321 117 aa6.53□□□□□ -1.36
PDGFC-209ENST00000513664 TMEM191AQ9H0A3 160 aa6.53□□□□□ -1.36
PDGFC-209ENST00000513664 KMT2AQ03164 3969 aa6.52□□□□□ -1.37
PDGFC-209ENST00000513664 TRAV9-2A0A087WT02 112 aa6.52□□□□□ -1.37
PDGFC-209ENST00000513664 M0QY20 66 aa6.52□□□□□ -1.37
PDGFC-209ENST00000513664 SIVA1O15304 175 aa6.52□□□□□ -1.37
PDGFC-209ENST00000513664 BTF3P20290 206 aaKnown RBP6.52□□□□□ -1.37
PDGFC-209ENST00000513664 TMEM97Q5BJF2 176 aa6.52□□□□□ -1.37
PDGFC-209ENST00000513664 LELP1Q5T871 98 aa6.52□□□□□ -1.37
PDGFC-209ENST00000513664 RASL11AQ6T310 242 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms