RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 OR4C5Q8NGB2 326 aa5.35□□□□□ -1.55
HMGXB3-204ENST00000513318 GTSF1Q8WW33 167 aa5.35□□□□□ -1.55
HMGXB3-204ENST00000513318 BORCS7Q96B45 105 aa5.35□□□□□ -1.55
HMGXB3-204ENST00000513318 AP1S3Q96PC3 154 aa5.35□□□□□ -1.55
HMGXB3-204ENST00000513318 KLK5Q9Y337 293 aaPredicted RBP5.35□□□□□ -1.55
HMGXB3-204ENST00000513318 CSMD3Q7Z407 3707 aa5.35□□□□□ -1.55
HMGXB3-204ENST00000513318 IGHV4-4A0A075B6R2 117 aa5.34□□□□□ -1.55
HMGXB3-204ENST00000513318 RHODO00212 210 aa5.34□□□□□ -1.55
HMGXB3-204ENST00000513318 RS1O15537 224 aa5.34□□□□□ -1.55
HMGXB3-204ENST00000513318 IGHV3-53P01767 116 aa5.34□□□□□ -1.55
HMGXB3-204ENST00000513318 TRGC1P0CF51 173 aa5.34□□□□□ -1.55
HMGXB3-204ENST00000513318 HOXA5P20719 270 aa5.34□□□□□ -1.55
HMGXB3-204ENST00000513318 TCTAP57738 103 aa5.34□□□□□ -1.55
HMGXB3-204ENST00000513318 SLAQ13239 276 aa5.34□□□□□ -1.55
HMGXB3-204ENST00000513318 CFAP126Q5VTH2 177 aa5.34□□□□□ -1.55
HMGXB3-204ENST00000513318 WDR73Q6P4I2 378 aa5.34□□□□□ -1.55
HMGXB3-204ENST00000513318 ZNF479Q96JC4 524 aa5.34□□□□□ -1.55
HMGXB3-204ENST00000513318 FAM210BQ96KR6 192 aa5.34□□□□□ -1.55
HMGXB3-204ENST00000513318 KRTAP9-2Q9BYQ4 174 aa5.34□□□□□ -1.55
HMGXB3-204ENST00000513318 NAT8BQ9UHF3 227 aa5.34□□□□□ -1.55
HMGXB3-204ENST00000513318 TRGV4A0A0C4DH28 118 aa5.33□□□□□ -1.56
HMGXB3-204ENST00000513318 MUC21A0A0G2JKD1 596 aa5.33□□□□□ -1.56
HMGXB3-204ENST00000513318 MUC21A0A140T8X8 626 aa5.33□□□□□ -1.56
HMGXB3-204ENST00000513318 A0A1B0GUT8 65 aa5.33□□□□□ -1.56
HMGXB3-204ENST00000513318 SMIM27A0A1W2PRY6 76 aa5.33□□□□□ -1.56
HMGXB3-204ENST00000513318 APOC3P02656 99 aa5.33□□□□□ -1.56
HMGXB3-204ENST00000513318 SMIM17P0DL12 118 aa5.33□□□□□ -1.56
HMGXB3-204ENST00000513318 FHL2Q14192 279 aa5.33□□□□□ -1.56
HMGXB3-204ENST00000513318 RHEBQ15382 184 aa5.33□□□□□ -1.56
HMGXB3-204ENST00000513318 CASC10Q5T4H9 136 aa5.33□□□□□ -1.56
HMGXB3-204ENST00000513318 FAM74A4Q5TZK3 123 aa5.33□□□□□ -1.56
HMGXB3-204ENST00000513318 ZFAND6Q6FIF0 208 aa5.33□□□□□ -1.56
HMGXB3-204ENST00000513318 ZFP2Q6ZN57 461 aa5.33□□□□□ -1.56
HMGXB3-204ENST00000513318 SVBPQ8N300 66 aa5.33□□□□□ -1.56
HMGXB3-204ENST00000513318 C15orf53Q8NAA6 179 aa5.33□□□□□ -1.56
HMGXB3-204ENST00000513318 PGLYRP4Q96LB8 373 aa5.33□□□□□ -1.56
HMGXB3-204ENST00000513318 CTDSP1Q9GZU7 261 aa5.33□□□□□ -1.56
HMGXB3-204ENST00000513318 JPT2Q9H910 190 aa5.33□□□□□ -1.56
HMGXB3-204ENST00000513318 PRO0255Q9UI72 69 aa5.33□□□□□ -1.56
HMGXB3-204ENST00000513318 TRAV26-1A0A087WT03 109 aa5.32□□□□□ -1.56
HMGXB3-204ENST00000513318 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.32□□□□□ -1.56
HMGXB3-204ENST00000513318 IGLL5B9A064 214 aa5.32□□□□□ -1.56
HMGXB3-204ENST00000513318 H3BNG1 76 aa5.32□□□□□ -1.56
HMGXB3-204ENST00000513318 SNAPINO95295 136 aa5.32□□□□□ -1.56
HMGXB3-204ENST00000513318 CRYGDP07320 174 aa5.32□□□□□ -1.56
HMGXB3-204ENST00000513318 GATA1P15976 413 aaPredicted RBP5.32□□□□□ -1.56
HMGXB3-204ENST00000513318 NTF3P20783 257 aa5.32□□□□□ -1.56
HMGXB3-204ENST00000513318 SSTP61278 116 aa5.32□□□□□ -1.56
HMGXB3-204ENST00000513318 RHOHQ15669 191 aa5.32□□□□□ -1.56
HMGXB3-204ENST00000513318 UFSP1Q6NVU6 142 aa5.32□□□□□ -1.56
HMGXB3-204ENST00000513318 TMEM88Q6PEY1 159 aa5.32□□□□□ -1.56
HMGXB3-204ENST00000513318 SMIM15Q7Z3B0 74 aa5.32□□□□□ -1.56
HMGXB3-204ENST00000513318 CLRN3Q8NCR9 226 aa5.32□□□□□ -1.56
HMGXB3-204ENST00000513318 NUP35Q8NFH5 326 aa5.32□□□□□ -1.56
HMGXB3-204ENST00000513318 HHLA3Q9XRX5 114 aa5.32□□□□□ -1.56
HMGXB3-204ENST00000513318 STARD9Q9P2P6 4700 aa5.32□□□□□ -1.56
HMGXB3-204ENST00000513318 A0A087WWC5 75 aa5.31□□□□□ -1.56
HMGXB3-204ENST00000513318 A0A087WWL8 130 aa5.31□□□□□ -1.56
HMGXB3-204ENST00000513318 IGHV3-73A0A0B4J1V6 119 aa5.31□□□□□ -1.56
HMGXB3-204ENST00000513318 A0A1B0GW15 77 aa5.31□□□□□ -1.56
HMGXB3-204ENST00000513318 TRBV6-4A0A1B0GX49 114 aa5.31□□□□□ -1.56
HMGXB3-204ENST00000513318 C7orf77A4D0Y5 90 aa5.31□□□□□ -1.56
HMGXB3-204ENST00000513318 CRYBA4P53673 196 aa5.31□□□□□ -1.56
HMGXB3-204ENST00000513318 RIGQ13278 110 aa5.31□□□□□ -1.56
HMGXB3-204ENST00000513318 TWIST1Q15672 202 aa5.31□□□□□ -1.56
HMGXB3-204ENST00000513318 ZNF56Q15929 161 aa5.31□□□□□ -1.56
HMGXB3-204ENST00000513318 C14orf178Q8N769 122 aaPredicted RBP5.31□□□□□ -1.56
HMGXB3-204ENST00000513318 IMMP2LQ96T52 175 aa5.31□□□□□ -1.56
HMGXB3-204ENST00000513318 KRTAP4-12Q9BQ66 201 aa5.31□□□□□ -1.56
HMGXB3-204ENST00000513318 SAMD10Q9BYL1 202 aa5.31□□□□□ -1.56
HMGXB3-204ENST00000513318 DPH3P1Q9H4G8 78 aa5.31□□□□□ -1.56
HMGXB3-204ENST00000513318 TMEM242Q9NWH2 141 aa5.31□□□□□ -1.56
HMGXB3-204ENST00000513318 MSRB1Q9NZV6 116 aa5.31□□□□□ -1.56
HMGXB3-204ENST00000513318 TENM2Q9NT68 2774 aa5.3□□□□□ -1.56
HMGXB3-204ENST00000513318 A0A0J9YY99 117 aa5.3□□□□□ -1.56
HMGXB3-204ENST00000513318 KRTAP9-6A0A140TA67 174 aa5.3□□□□□ -1.56
HMGXB3-204ENST00000513318 K7EQD1 137 aa5.3□□□□□ -1.56
HMGXB3-204ENST00000513318 S100A8P05109 93 aa5.3□□□□□ -1.56
HMGXB3-204ENST00000513318 EVI2AP22794 236 aa5.3□□□□□ -1.56
HMGXB3-204ENST00000513318 RAB4BP61018 213 aa5.3□□□□□ -1.56
HMGXB3-204ENST00000513318 KCNIP4Q6PIL6 250 aa5.3□□□□□ -1.56
HMGXB3-204ENST00000513318 ATP5L2Q7Z4Y8 100 aa5.3□□□□□ -1.56
HMGXB3-204ENST00000513318 KRTAP19-1Q8IUB9 90 aa5.3□□□□□ -1.56
HMGXB3-204ENST00000513318 SLC25A29Q8N8R3 303 aa5.3□□□□□ -1.56
HMGXB3-204ENST00000513318 VSIG2Q96IQ7 327 aa5.3□□□□□ -1.56
HMGXB3-204ENST00000513318 PRADC1Q9BSG0 188 aa5.3□□□□□ -1.56
HMGXB3-204ENST00000513318 RPS10P5Q9NQ39 176 aa5.3□□□□□ -1.56
HMGXB3-204ENST00000513318 PLA2G2DQ9UNK4 145 aa5.3□□□□□ -1.56
HMGXB3-204ENST00000513318 ICOSQ9Y6W8 199 aa5.3□□□□□ -1.56
HMGXB3-204ENST00000513318 KIF25-AS1Q9Y6Z4 181 aa5.3□□□□□ -1.56
HMGXB3-204ENST00000513318 DYNC2H1Q8NCM8 4307 aaKnown RBP5.29□□□□□ -1.56
HMGXB3-204ENST00000513318 TRAV9-1A0A075B6T8 112 aa5.29□□□□□ -1.56
HMGXB3-204ENST00000513318 TRBV10-1A0A0K0K1A3 114 aa5.29□□□□□ -1.56
HMGXB3-204ENST00000513318 F5H697 171 aa5.29□□□□□ -1.56
HMGXB3-204ENST00000513318 H7C1H1 209 aa5.29□□□□□ -1.56
HMGXB3-204ENST00000513318 NUDT3O95989 172 aa5.29□□□□□ -1.56
HMGXB3-204ENST00000513318 MGPP08493 103 aa5.29□□□□□ -1.56
HMGXB3-204ENST00000513318 GYPEP15421 78 aa5.29□□□□□ -1.56
HMGXB3-204ENST00000513318 S100PP25815 95 aa5.29□□□□□ -1.56
HMGXB3-204ENST00000513318 FAM3BP58499 235 aaPredicted RBP5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms