RNA–Protein interactions for RNA: ENST00000513228.1

SMN1-208, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 2

Gene SMN1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-208ENST00000513228 C20orf197Q8N268 126 aa0□□□□□ -2.41
SMN1-208ENST00000513228 PPP1R1CQ8WVI7 109 aa0□□□□□ -2.41
SMN1-208ENST00000513228 PRG4Q92954 1404 aaPredicted RBP0□□□□□ -2.41
SMN1-208ENST00000513228 TTC28Q96AY4 2481 aa0□□□□□ -2.41
SMN1-208ENST00000513228 Q96NJ1 140 aa0□□□□□ -2.41
SMN1-208ENST00000513228 PRR15LQ9BU68 103 aa0□□□□□ -2.41
SMN1-208ENST00000513228 BPESC1Q9GZL8 116 aa0□□□□□ -2.41
SMN1-208ENST00000513228 GSKIPQ9P0R6 139 aa0□□□□□ -2.41
SMN1-208ENST00000513228 ERG28Q9UKR5 140 aa0□□□□□ -2.41
SMN1-208ENST00000513228 MED13LQ71F56 2210 aa-0.01□□□□□ -2.41
SMN1-208ENST00000513228 CDK5RAP2Q96SN8 1893 aa-0.01□□□□□ -2.41
SMN1-208ENST00000513228 ADGRB1O14514 1584 aa-0.01□□□□□ -2.41
SMN1-208ENST00000513228 UNC13BO14795 1591 aa-0.01□□□□□ -2.41
SMN1-208ENST00000513228 LAMC3Q9Y6N6 1575 aa-0.01□□□□□ -2.41
SMN1-208ENST00000513228 TRAV12-3A0A0B4J271 114 aa-0.01□□□□□ -2.41
SMN1-208ENST00000513228 RBAKDNA6NC62 111 aa-0.01□□□□□ -2.41
SMN1-208ENST00000513228 TSPAN19P0C672 248 aa-0.01□□□□□ -2.41
SMN1-208ENST00000513228 LINC00694P0DN24 101 aa-0.01□□□□□ -2.41
SMN1-208ENST00000513228 CKS1BP61024 79 aa-0.01□□□□□ -2.41
SMN1-208ENST00000513228 NCS1P62166 190 aa-0.01□□□□□ -2.41
SMN1-208ENST00000513228 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.01□□□□□ -2.41
SMN1-208ENST00000513228 COX7B2Q8TF08 81 aa-0.01□□□□□ -2.41
SMN1-208ENST00000513228 SMIM3Q9BZL3 60 aa-0.01□□□□□ -2.41
SMN1-208ENST00000513228 NDUFA12Q9UI09 145 aa-0.01□□□□□ -2.41
SMN1-208ENST00000513228 NCOR2Q9Y618 2525 aa-0.01□□□□□ -2.41
SMN1-208ENST00000513228 CACNA1HO95180 2353 aa-0.01□□□□□ -2.41
SMN1-208ENST00000513228 TPRP12270 2363 aaKnown RBP-0.01□□□□□ -2.41
SMN1-208ENST00000513228 PHIPQ8WWQ0 1821 aa-0.01□□□□□ -2.41
SMN1-208ENST00000513228 NRXN2Q9P2S2 1712 aa-0.01□□□□□ -2.41
SMN1-208ENST00000513228 UNC13AQ9UPW8 1703 aa-0.01□□□□□ -2.41
SMN1-208ENST00000513228 ANK2Q01484 3957 aa-0.02□□□□□ -2.41
SMN1-208ENST00000513228 COX4I1P13073 169 aa-0.02□□□□□ -2.41
SMN1-208ENST00000513228 SSBP1Q04837 148 aaKnown RBP-0.02□□□□□ -2.41
SMN1-208ENST00000513228 SPCS2Q15005 226 aa-0.02□□□□□ -2.41
SMN1-208ENST00000513228 VSTM2AQ8TAG5 236 aa-0.02□□□□□ -2.41
SMN1-208ENST00000513228 SMIM11BQ8TCY0 68 aa-0.02□□□□□ -2.41
SMN1-208ENST00000513228 LAMB1P07942 1786 aa-0.02□□□□□ -2.41
SMN1-208ENST00000513228 CEP152O94986 1710 aa-0.02□□□□□ -2.41
SMN1-208ENST00000513228 F5P12259 2224 aa-0.02□□□□□ -2.41
SMN1-208ENST00000513228 MYH13Q9UKX3 1938 aa-0.03□□□□□ -2.41
SMN1-208ENST00000513228 DISP2A7MBM2 1401 aa-0.03□□□□□ -2.41
SMN1-208ENST00000513228 LOC105371267A0A1B0GV96 52 aa-0.03□□□□□ -2.41
SMN1-208ENST00000513228 CLPSL1A2RUU4 121 aa-0.03□□□□□ -2.41
SMN1-208ENST00000513228 NMBP08949 121 aa-0.03□□□□□ -2.41
SMN1-208ENST00000513228 Q5BKY6 102 aa-0.03□□□□□ -2.41
SMN1-208ENST00000513228 SLC48A1Q6P1K1 146 aa-0.03□□□□□ -2.41
SMN1-208ENST00000513228 C4orf33Q8N1A6 199 aa-0.03□□□□□ -2.41
SMN1-208ENST00000513228 MMGT1Q8N4V1 131 aa-0.03□□□□□ -2.41
SMN1-208ENST00000513228 C10orf82Q8WW14 230 aa-0.03□□□□□ -2.41
SMN1-208ENST00000513228 SAR1AQ9NR31 198 aa-0.03□□□□□ -2.41
SMN1-208ENST00000513228 JMJD1CQ15652 2540 aa-0.03□□□□□ -2.41
SMN1-208ENST00000513228 AKAP11Q9UKA4 1901 aa-0.03□□□□□ -2.41
SMN1-208ENST00000513228 TRBV7-1A0A0A6YYK4 115 aa-0.04□□□□□ -2.42
SMN1-208ENST00000513228 PIRTP0C851 137 aa-0.04□□□□□ -2.42
SMN1-208ENST00000513228 ALX1Q15699 326 aa-0.04□□□□□ -2.42
SMN1-208ENST00000513228 C9orf116Q5BN46 136 aaPredicted RBP-0.04□□□□□ -2.42
SMN1-208ENST00000513228 SPANXN1Q5VSR9 72 aa-0.04□□□□□ -2.42
SMN1-208ENST00000513228 Q6ZUT4 128 aa-0.04□□□□□ -2.42
SMN1-208ENST00000513228 CTAGE3PQ8IX95 158 aa-0.04□□□□□ -2.42
SMN1-208ENST00000513228 BATF3Q9NR55 127 aa-0.04□□□□□ -2.42
SMN1-208ENST00000513228 TMEM242Q9NWH2 141 aa-0.04□□□□□ -2.42
SMN1-208ENST00000513228 V9GYV3 84 aa-0.04□□□□□ -2.42
SMN1-208ENST00000513228 FHAD1B1AJZ9 1412 aa-0.04□□□□□ -2.42
SMN1-208ENST00000513228 ARFGEF1Q9Y6D6 1849 aa-0.05□□□□□ -2.42
SMN1-208ENST00000513228 TRGV1A0A0A0MS02 117 aa-0.05□□□□□ -2.42
SMN1-208ENST00000513228 NCR2O95944 276 aa-0.05□□□□□ -2.42
SMN1-208ENST00000513228 SPINK1P00995 79 aa-0.05□□□□□ -2.42
SMN1-208ENST00000513228 APODP05090 189 aa-0.05□□□□□ -2.42
SMN1-208ENST00000513228 ACYP2P14621 99 aa-0.05□□□□□ -2.42
SMN1-208ENST00000513228 UBE2D1P51668 147 aa-0.05□□□□□ -2.42
SMN1-208ENST00000513228 COX6A2Q02221 97 aa-0.05□□□□□ -2.42
SMN1-208ENST00000513228 FAM74A4Q5TZK3 123 aa-0.05□□□□□ -2.42
SMN1-208ENST00000513228 Q6ZRX8 168 aa-0.05□□□□□ -2.42
SMN1-208ENST00000513228 SIPA1L3O60292 1781 aaPredicted RBP-0.05□□□□□ -2.42
SMN1-208ENST00000513228 DSTQ03001 7570 aaKnown RBP-0.05□□□□□ -2.42
SMN1-208ENST00000513228 GOLGA3Q08378 1498 aa-0.05□□□□□ -2.42
SMN1-208ENST00000513228 IBTKQ9P2D0 1353 aaPredicted RBP-0.06□□□□□ -2.42
SMN1-208ENST00000513228 ABCA12Q86UK0 2595 aa-0.06□□□□□ -2.42
SMN1-208ENST00000513228 MYH6P13533 1939 aa-0.06□□□□□ -2.42
SMN1-208ENST00000513228 M0R2Z0 102 aa-0.06□□□□□ -2.42
SMN1-208ENST00000513228 NPFFO15130 113 aa-0.06□□□□□ -2.42
SMN1-208ENST00000513228 UBE2G1P62253 170 aa-0.06□□□□□ -2.42
SMN1-208ENST00000513228 TSTD1Q8NFU3 115 aa-0.06□□□□□ -2.42
SMN1-208ENST00000513228 TMEM2Q9UHN6 1383 aa-0.06□□□□□ -2.42
SMN1-208ENST00000513228 ANKRD17O75179 2603 aaKnown RBP-0.07□□□□□ -2.42
SMN1-208ENST00000513228 PARP14Q460N5 1801 aa-0.07□□□□□ -2.42
SMN1-208ENST00000513228 TMEM14DPA8MWL7 114 aa-0.07□□□□□ -2.42
SMN1-208ENST00000513228 G3V318 75 aa-0.07□□□□□ -2.42
SMN1-208ENST00000513228 J3QR89 54 aa-0.07□□□□□ -2.42
SMN1-208ENST00000513228 K7ERU9 68 aa-0.07□□□□□ -2.42
SMN1-208ENST00000513228 EDDM3BP56851 147 aa-0.07□□□□□ -2.42
SMN1-208ENST00000513228 INSL4Q14641 139 aa-0.07□□□□□ -2.42
SMN1-208ENST00000513228 SMIM21Q3B7S5 101 aa-0.07□□□□□ -2.42
SMN1-208ENST00000513228 MAFIPQ8WZ33 124 aa-0.07□□□□□ -2.42
SMN1-208ENST00000513228 LZICQ8WZA0 190 aa-0.07□□□□□ -2.42
SMN1-208ENST00000513228 ANP32BQ92688 251 aaKnown RBP-0.07□□□□□ -2.42
SMN1-208ENST00000513228 COPZ2Q9P299 210 aa-0.07□□□□□ -2.42
SMN1-208ENST00000513228 HRNRQ86YZ3 2850 aaPredicted RBP-0.07□□□□□ -2.42
SMN1-208ENST00000513228 UBR5O95071 2799 aaPredicted RBP-0.07□□□□□ -2.42
SMN1-208ENST00000513228 PIEZO1Q92508 2521 aa-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms