RNA–Protein interactions for RNA: ENST00000512258.1

MSH3-202, Transcript of mutS homolog 3, humanhuman

TSL 3

Gene MSH3, Length 677 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-202ENST00000512258 SFRP2Q96HF1 295 aa3.62□□□□□ -1.83
MSH3-202ENST00000512258 C9orf85Q96MD7 179 aa3.62□□□□□ -1.83
MSH3-202ENST00000512258 SEC11CQ9BY50 192 aa3.62□□□□□ -1.83
MSH3-202ENST00000512258 RPP21Q9H633 154 aaKnown RBP3.62□□□□□ -1.83
MSH3-202ENST00000512258 NOP10Q9NPE3 64 aaKnown RBP3.62□□□□□ -1.83
MSH3-202ENST00000512258 MRPL16Q9NX20 251 aaKnown RBP3.62□□□□□ -1.83
MSH3-202ENST00000512258 CARHSP1Q9Y2V2 147 aaKnown RBP3.62□□□□□ -1.83
MSH3-202ENST00000512258 V9GYV3 84 aa3.62□□□□□ -1.83
MSH3-202ENST00000512258 STAB2Q8WWQ8 2551 aa3.61□□□□□ -1.83
MSH3-202ENST00000512258 SMIM9A6NGZ8 99 aa3.61□□□□□ -1.83
MSH3-202ENST00000512258 APOC3P02656 99 aa3.61□□□□□ -1.83
MSH3-202ENST00000512258 IGLC6P0CF74 106 aa3.61□□□□□ -1.83
MSH3-202ENST00000512258 ASIPP42127 132 aa3.61□□□□□ -1.83
MSH3-202ENST00000512258 ZNF415Q09FC8 603 aa3.61□□□□□ -1.83
MSH3-202ENST00000512258 NDUFA5Q16718 116 aa3.61□□□□□ -1.83
MSH3-202ENST00000512258 LYZL1Q6UWQ5 148 aa3.61□□□□□ -1.83
MSH3-202ENST00000512258 OR10G8Q8NGN5 311 aa3.61□□□□□ -1.83
MSH3-202ENST00000512258 OR10AG1Q8NH19 301 aa3.61□□□□□ -1.83
MSH3-202ENST00000512258 C16orf74Q96GX8 76 aa3.61□□□□□ -1.83
MSH3-202ENST00000512258 KCNS1Q96KK3 526 aa3.61□□□□□ -1.83
MSH3-202ENST00000512258 TPPP3Q9BW30 176 aa3.61□□□□□ -1.83
MSH3-202ENST00000512258 JPT2Q9H910 190 aa3.61□□□□□ -1.83
MSH3-202ENST00000512258 OSTCQ9NRP0 149 aa3.61□□□□□ -1.83
MSH3-202ENST00000512258 U3KQK5 164 aa3.61□□□□□ -1.83
MSH3-202ENST00000512258 MUC4Q99102 2169 aa3.61□□□□□ -1.83
MSH3-202ENST00000512258 TRGV1A0A0A0MS02 117 aa3.6□□□□□ -1.83
MSH3-202ENST00000512258 C7orf77A4D0Y5 90 aa3.6□□□□□ -1.83
MSH3-202ENST00000512258 SNURFLB1AK76 121 aa3.6□□□□□ -1.83
MSH3-202ENST00000512258 SNAI2O43623 268 aa3.6□□□□□ -1.83
MSH3-202ENST00000512258 SPINK4O60575 86 aa3.6□□□□□ -1.83
MSH3-202ENST00000512258 GAGE7O76087 117 aa3.6□□□□□ -1.83
MSH3-202ENST00000512258 IGHV3-53P01767 116 aa3.6□□□□□ -1.83
MSH3-202ENST00000512258 GAGE12FP0CL80 117 aa3.6□□□□□ -1.83
MSH3-202ENST00000512258 GAGE12GP0CL81 117 aa3.6□□□□□ -1.83
MSH3-202ENST00000512258 GAGE12IP0CL82 117 aa3.6□□□□□ -1.83
MSH3-202ENST00000512258 DEFB130BP0DP73 79 aa3.6□□□□□ -1.83
MSH3-202ENST00000512258 DEFB130AP0DP74 79 aa3.6□□□□□ -1.83
MSH3-202ENST00000512258 S100A4P26447 101 aaKnown RBP3.6□□□□□ -1.83
MSH3-202ENST00000512258 FAM3BP58499 235 aaPredicted RBP3.6□□□□□ -1.83
MSH3-202ENST00000512258 PNRC1Q12796 327 aaPredicted RBP3.6□□□□□ -1.83
MSH3-202ENST00000512258 C12orf74Q32Q52 190 aa3.6□□□□□ -1.83
MSH3-202ENST00000512258 DNLZQ5SXM8 178 aa3.6□□□□□ -1.83
MSH3-202ENST00000512258 ZNF493Q6ZR52 646 aa3.6□□□□□ -1.83
MSH3-202ENST00000512258 POM121L12Q8N7R1 296 aa3.6□□□□□ -1.83
MSH3-202ENST00000512258 C15orf54Q8N8G6 183 aa3.6□□□□□ -1.83
MSH3-202ENST00000512258 FER1L6-AS1Q8NA97 138 aa3.6□□□□□ -1.83
MSH3-202ENST00000512258 PGLYRP4Q96LB8 373 aa3.6□□□□□ -1.83
MSH3-202ENST00000512258 C11orf68Q9H3H3 251 aaKnown RBP3.6□□□□□ -1.83
MSH3-202ENST00000512258 EDA2RQ9HAV5 297 aa3.6□□□□□ -1.83
MSH3-202ENST00000512258 SCRT2Q9NQ03 307 aa3.6□□□□□ -1.83
MSH3-202ENST00000512258 BIN3Q9NQY0 253 aa3.6□□□□□ -1.83
MSH3-202ENST00000512258 IL36BQ9NZH7 164 aa3.6□□□□□ -1.83
MSH3-202ENST00000512258 MSRB1Q9NZV6 116 aa3.6□□□□□ -1.83
MSH3-202ENST00000512258 IGHV3-73A0A0B4J1V6 119 aa3.59□□□□□ -1.83
MSH3-202ENST00000512258 SMIM27A0A1W2PRY6 76 aa3.59□□□□□ -1.83
MSH3-202ENST00000512258 CXorf65A6NEN9 183 aa3.59□□□□□ -1.83
MSH3-202ENST00000512258 HIGD1CA8MV81 97 aa3.59□□□□□ -1.83
MSH3-202ENST00000512258 A8MWL6 223 aa3.59□□□□□ -1.83
MSH3-202ENST00000512258 M0R2P5 195 aa3.59□□□□□ -1.83
MSH3-202ENST00000512258 M0R381 172 aa3.59□□□□□ -1.83
MSH3-202ENST00000512258 CXCL1P09341 107 aa3.59□□□□□ -1.83
MSH3-202ENST00000512258 SPART-AS1P0CW21 52 aa3.59□□□□□ -1.83
MSH3-202ENST00000512258 CTRLP40313 264 aa3.59□□□□□ -1.83
MSH3-202ENST00000512258 FOXA3P55318 350 aaPredicted RBP3.59□□□□□ -1.83
MSH3-202ENST00000512258 RPS20P60866 119 aaKnown RBP3.59□□□□□ -1.83
MSH3-202ENST00000512258 DAZ2Q13117 558 aaKnown RBP3.59□□□□□ -1.83
MSH3-202ENST00000512258 ZNF876PQ49A33 203 aa3.59□□□□□ -1.83
MSH3-202ENST00000512258 LINC00612Q8N6U2 182 aa3.59□□□□□ -1.83
MSH3-202ENST00000512258 NUP35Q8NFH5 326 aa3.59□□□□□ -1.83
MSH3-202ENST00000512258 TSKUQ8WUA8 353 aa3.59□□□□□ -1.83
MSH3-202ENST00000512258 SPXQ9BT56 116 aa3.59□□□□□ -1.83
MSH3-202ENST00000512258 SAMD10Q9BYL1 202 aa3.59□□□□□ -1.83
MSH3-202ENST00000512258 RPS10P5Q9NQ39 176 aa3.59□□□□□ -1.83
MSH3-202ENST00000512258 A0A087WWL8 130 aa3.58□□□□□ -1.84
MSH3-202ENST00000512258 LYRM9A8MSI8 78 aa3.58□□□□□ -1.84
MSH3-202ENST00000512258 ATP6V1G1O75348 118 aa3.58□□□□□ -1.84
MSH3-202ENST00000512258 SCO1O75880 301 aa3.58□□□□□ -1.84
MSH3-202ENST00000512258 NXPH4O95158 308 aa3.58□□□□□ -1.84
MSH3-202ENST00000512258 MT-ND4LP03901 98 aa3.58□□□□□ -1.84
MSH3-202ENST00000512258 OR5AL1P0C617 328 aa3.58□□□□□ -1.84
MSH3-202ENST00000512258 HTN3P15516 51 aa3.58□□□□□ -1.84
MSH3-202ENST00000512258 NTF3P20783 257 aa3.58□□□□□ -1.84
MSH3-202ENST00000512258 DAD1P61803 113 aa3.58□□□□□ -1.84
MSH3-202ENST00000512258 CFAP126Q5VTH2 177 aa3.58□□□□□ -1.84
MSH3-202ENST00000512258 CBLN2Q8IUK8 224 aa3.58□□□□□ -1.84
MSH3-202ENST00000512258 SVBPQ8N300 66 aa3.58□□□□□ -1.84
MSH3-202ENST00000512258 C11orf45Q8TAV5 145 aa3.58□□□□□ -1.84
MSH3-202ENST00000512258 RASL10AQ92737 203 aa3.58□□□□□ -1.84
MSH3-202ENST00000512258 PHLDA3Q9Y5J5 127 aa3.58□□□□□ -1.84
MSH3-202ENST00000512258 URGCP-MRPS24S4R325 110 aa3.58□□□□□ -1.84
MSH3-202ENST00000512258 TRGV2A0A075B6R0 118 aa3.57□□□□□ -1.84
MSH3-202ENST00000512258 A0A087WWC5 75 aa3.57□□□□□ -1.84
MSH3-202ENST00000512258 A0A1W2PPQ1 181 aa3.57□□□□□ -1.84
MSH3-202ENST00000512258 XKRY2A2RUG3 117 aa3.57□□□□□ -1.84
MSH3-202ENST00000512258 NACAE9PAV3 2078 aa3.57□□□□□ -1.84
MSH3-202ENST00000512258 PPP1R2P9O14990 202 aa3.57□□□□□ -1.84
MSH3-202ENST00000512258 RS1O15537 224 aa3.57□□□□□ -1.84
MSH3-202ENST00000512258 SNAPINO95295 136 aa3.57□□□□□ -1.84
MSH3-202ENST00000512258 CRYGDP07320 174 aa3.57□□□□□ -1.84
MSH3-202ENST00000512258 EVI2AP22794 236 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms