RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 IGHV4-4A0A075B6R2 117 aa13.8□□□□□ -0.2
SMAD1-211ENST00000512019 RS1O15537 224 aa13.8□□□□□ -0.2
SMAD1-211ENST00000512019 CIDEAO60543 219 aa13.8□□□□□ -0.2
SMAD1-211ENST00000512019 IGHV3-53P01767 116 aa13.8□□□□□ -0.2
SMAD1-211ENST00000512019 CFAP126Q5VTH2 177 aa13.8□□□□□ -0.2
SMAD1-211ENST00000512019 AP1S3Q96PC3 154 aa13.8□□□□□ -0.2
SMAD1-211ENST00000512019 F5H768 121 aa13.79□□□□□ -0.2
SMAD1-211ENST00000512019 SNAPINO95295 136 aa13.79□□□□□ -0.2
SMAD1-211ENST00000512019 SSTP61278 116 aa13.79□□□□□ -0.2
SMAD1-211ENST00000512019 RHODO00212 210 aa13.78□□□□□ -0.2
SMAD1-211ENST00000512019 TWIST1Q15672 202 aa13.78□□□□□ -0.2
SMAD1-211ENST00000512019 POM121L12Q8N7R1 296 aa13.78□□□□□ -0.2
SMAD1-211ENST00000512019 NUP35Q8NFH5 326 aa13.78□□□□□ -0.2
SMAD1-211ENST00000512019 ZNF479Q96JC4 524 aa13.78□□□□□ -0.2
SMAD1-211ENST00000512019 A0A087WWC5 75 aa13.77□□□□□ -0.21
SMAD1-211ENST00000512019 TRGV4A0A0C4DH28 118 aa13.77□□□□□ -0.21
SMAD1-211ENST00000512019 A0A1B0GUT8 65 aa13.77□□□□□ -0.21
SMAD1-211ENST00000512019 C7orf77A4D0Y5 90 aa13.77□□□□□ -0.21
SMAD1-211ENST00000512019 TRGC1P0CF51 173 aa13.77□□□□□ -0.21
SMAD1-211ENST00000512019 NTF3P20783 257 aa13.77□□□□□ -0.21
SMAD1-211ENST00000512019 ZFP2Q6ZN57 461 aa13.77□□□□□ -0.21
SMAD1-211ENST00000512019 SMIM17P0DL12 118 aa13.76□□□□□ -0.21
SMAD1-211ENST00000512019 SLAQ13239 276 aa13.76□□□□□ -0.21
SMAD1-211ENST00000512019 FAM74A4Q5TZK3 123 aa13.76□□□□□ -0.21
SMAD1-211ENST00000512019 JPT2Q9H910 190 aa13.76□□□□□ -0.21
SMAD1-211ENST00000512019 RPS10P5Q9NQ39 176 aa13.76□□□□□ -0.21
SMAD1-211ENST00000512019 TMEM242Q9NWH2 141 aa13.76□□□□□ -0.21
SMAD1-211ENST00000512019 KLK5Q9Y337 293 aaPredicted RBP13.76□□□□□ -0.21
SMAD1-211ENST00000512019 HOXA5P20719 270 aa13.75□□□□□ -0.21
SMAD1-211ENST00000512019 RIGQ13278 110 aa13.75□□□□□ -0.21
SMAD1-211ENST00000512019 SMIM15Q7Z3B0 74 aa13.75□□□□□ -0.21
SMAD1-211ENST00000512019 FAM210BQ96KR6 192 aa13.75□□□□□ -0.21
SMAD1-211ENST00000512019 IMMP2LQ96T52 175 aa13.75□□□□□ -0.21
SMAD1-211ENST00000512019 VPS13DQ5THJ4 4388 aa13.74□□□□□ -0.21
SMAD1-211ENST00000512019 A0A087WWL8 130 aa13.74□□□□□ -0.21
SMAD1-211ENST00000512019 IGHV3-73A0A0B4J1V6 119 aa13.74□□□□□ -0.21
SMAD1-211ENST00000512019 FHL2Q14192 279 aa13.74□□□□□ -0.21
SMAD1-211ENST00000512019 KCNIP4Q6PIL6 250 aa13.74□□□□□ -0.21
SMAD1-211ENST00000512019 C14orf178Q8N769 122 aaPredicted RBP13.74□□□□□ -0.21
SMAD1-211ENST00000512019 SAMD10Q9BYL1 202 aa13.74□□□□□ -0.21
SMAD1-211ENST00000512019 KRTAP17-1Q9BYP8 105 aa13.74□□□□□ -0.21
SMAD1-211ENST00000512019 MSRB1Q9NZV6 116 aa13.74□□□□□ -0.21
SMAD1-211ENST00000512019 CRYGDP07320 174 aa13.73□□□□□ -0.21
SMAD1-211ENST00000512019 UFSP1Q6NVU6 142 aa13.73□□□□□ -0.21
SMAD1-211ENST00000512019 PRO0255Q9UI72 69 aa13.73□□□□□ -0.21
SMAD1-211ENST00000512019 HERC2O95714 4834 aa13.73□□□□□ -0.21
SMAD1-211ENST00000512019 A0A1B0GW15 77 aa13.72□□□□□ -0.21
SMAD1-211ENST00000512019 S100PP25815 95 aa13.72□□□□□ -0.21
SMAD1-211ENST00000512019 HHLA3Q9XRX5 114 aa13.72□□□□□ -0.21
SMAD1-211ENST00000512019 TRAV26-1A0A087WT03 109 aa13.71□□□□□ -0.21
SMAD1-211ENST00000512019 IGLL5B9A064 214 aa13.71□□□□□ -0.21
SMAD1-211ENST00000512019 GATA1P15976 413 aaPredicted RBP13.71□□□□□ -0.21
SMAD1-211ENST00000512019 EVI2AP22794 236 aa13.71□□□□□ -0.21
SMAD1-211ENST00000512019 FAM3BP58499 235 aaPredicted RBP13.71□□□□□ -0.21
SMAD1-211ENST00000512019 TMEM88Q6PEY1 159 aa13.71□□□□□ -0.21
SMAD1-211ENST00000512019 ATP5L2Q7Z4Y8 100 aa13.71□□□□□ -0.21
SMAD1-211ENST00000512019 DPH3P1Q9H4G8 78 aa13.71□□□□□ -0.21
SMAD1-211ENST00000512019 DNAH6Q9C0G6 4158 aa13.71□□□□□ -0.22
SMAD1-211ENST00000512019 NACAE9PAV3 2078 aa13.7□□□□□ -0.22
SMAD1-211ENST00000512019 S100A8P05109 93 aa13.7□□□□□ -0.22
SMAD1-211ENST00000512019 CRYBA4P53673 196 aa13.7□□□□□ -0.22
SMAD1-211ENST00000512019 ZNF56Q15929 161 aa13.7□□□□□ -0.22
SMAD1-211ENST00000512019 BTF3L4Q96K17 158 aa13.7□□□□□ -0.22
SMAD1-211ENST00000512019 TRBV6-4A0A1B0GX49 114 aa13.69□□□□□ -0.22
SMAD1-211ENST00000512019 H3BNG1 76 aa13.69□□□□□ -0.22
SMAD1-211ENST00000512019 PAX4O43316 350 aa13.69□□□□□ -0.22
SMAD1-211ENST00000512019 MGPP08493 103 aa13.69□□□□□ -0.22
SMAD1-211ENST00000512019 HBBP68871 147 aa13.69□□□□□ -0.22
SMAD1-211ENST00000512019 MRPL54Q6P161 138 aaKnown RBP13.69□□□□□ -0.22
SMAD1-211ENST00000512019 KIF25-AS1Q9Y6Z4 181 aa13.69□□□□□ -0.22
SMAD1-211ENST00000512019 TRAV9-1A0A075B6T8 112 aa13.68□□□□□ -0.22
SMAD1-211ENST00000512019 A0A0J9YY99 117 aa13.68□□□□□ -0.22
SMAD1-211ENST00000512019 F5H697 171 aa13.68□□□□□ -0.22
SMAD1-211ENST00000512019 TCTAP57738 103 aa13.68□□□□□ -0.22
SMAD1-211ENST00000512019 RAB4BP61018 213 aa13.68□□□□□ -0.22
SMAD1-211ENST00000512019 RHOHQ15669 191 aa13.68□□□□□ -0.22
SMAD1-211ENST00000512019 LGALS9CQ6DKI2 356 aa13.68□□□□□ -0.22
SMAD1-211ENST00000512019 C15orf53Q8NAA6 179 aa13.68□□□□□ -0.22
SMAD1-211ENST00000512019 PRADC1Q9BSG0 188 aa13.68□□□□□ -0.22
SMAD1-211ENST00000512019 TMEM191AQ9H0A3 160 aa13.68□□□□□ -0.22
SMAD1-211ENST00000512019 K7EQD1 137 aa13.67□□□□□ -0.22
SMAD1-211ENST00000512019 CAMPP49913 170 aa13.67□□□□□ -0.22
SMAD1-211ENST00000512019 SLC25A29Q8N8R3 303 aa13.67□□□□□ -0.22
SMAD1-211ENST00000512019 VSIG2Q96IQ7 327 aa13.67□□□□□ -0.22
SMAD1-211ENST00000512019 A0A1B0GXF2 115 aa13.66□□□□□ -0.22
SMAD1-211ENST00000512019 URGCP-MRPS24S4R325 110 aa13.66□□□□□ -0.22
SMAD1-211ENST00000512019 LINC00315P59091 139 aa13.65□□□□□ -0.22
SMAD1-211ENST00000512019 Q6ZSN1 163 aa13.65□□□□□ -0.22
SMAD1-211ENST00000512019 HECTD4Q9Y4D8 3996 aa13.65□□□□□ -0.22
SMAD1-211ENST00000512019 H7C1H1 209 aa13.64□□□□□ -0.23
SMAD1-211ENST00000512019 GYPEP15421 78 aa13.64□□□□□ -0.23
SMAD1-211ENST00000512019 ATRAIDQ6UW56 229 aa13.64□□□□□ -0.23
SMAD1-211ENST00000512019 ICOSQ9Y6W8 199 aa13.64□□□□□ -0.23
SMAD1-211ENST00000512019 TRBV10-1A0A0K0K1A3 114 aa13.63□□□□□ -0.23
SMAD1-211ENST00000512019 NUDT3O95989 172 aa13.63□□□□□ -0.23
SMAD1-211ENST00000512019 SUMO4Q6EEV6 95 aa13.63□□□□□ -0.23
SMAD1-211ENST00000512019 RASL11AQ6T310 242 aa13.63□□□□□ -0.23
SMAD1-211ENST00000512019 MRPL23Q16540 153 aaKnown RBP13.62□□□□□ -0.23
SMAD1-211ENST00000512019 GATD1Q8NB37 220 aa13.62□□□□□ -0.23
SMAD1-211ENST00000512019 FRZBQ92765 325 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms