RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 XCL2Q9UBD3 114 aa6.61□□□□□ -1.35
NR1I3-228ENST00000511676 LCE6AA0A183 80 aa6.6□□□□□ -1.35
NR1I3-228ENST00000511676 M0R2P5 195 aa6.6□□□□□ -1.35
NR1I3-228ENST00000511676 CIDEAO60543 219 aa6.6□□□□□ -1.35
NR1I3-228ENST00000511676 HOXA5P20719 270 aa6.6□□□□□ -1.35
NR1I3-228ENST00000511676 DAZ2Q13117 558 aaKnown RBP6.6□□□□□ -1.35
NR1I3-228ENST00000511676 LGALS9BQ3B8N2 356 aa6.6□□□□□ -1.35
NR1I3-228ENST00000511676 C11orf72Q8NBR9 251 aa6.6□□□□□ -1.35
NR1I3-228ENST00000511676 RNASE8Q8TDE3 154 aaKnown RBP6.6□□□□□ -1.35
NR1I3-228ENST00000511676 C16orf74Q96GX8 76 aa6.6□□□□□ -1.35
NR1I3-228ENST00000511676 EDA2RQ9HAV5 297 aa6.6□□□□□ -1.35
NR1I3-228ENST00000511676 PRSS47A8MTI9 375 aa6.59□□□□□ -1.35
NR1I3-228ENST00000511676 A8MWV9 139 aa6.59□□□□□ -1.35
NR1I3-228ENST00000511676 FAM229AH3BQW9 127 aa6.59□□□□□ -1.35
NR1I3-228ENST00000511676 RHODO00212 210 aa6.59□□□□□ -1.35
NR1I3-228ENST00000511676 RAB4AP20338 218 aa6.59□□□□□ -1.35
NR1I3-228ENST00000511676 SRIP30626 198 aa6.59□□□□□ -1.35
NR1I3-228ENST00000511676 FXYD7P58549 80 aa6.59□□□□□ -1.35
NR1I3-228ENST00000511676 SBSPONQ8IVN8 264 aa6.59□□□□□ -1.35
NR1I3-228ENST00000511676 C18orf32Q8TCD1 76 aa6.59□□□□□ -1.35
NR1I3-228ENST00000511676 RASL10AQ92737 203 aa6.59□□□□□ -1.35
NR1I3-228ENST00000511676 RNF185Q96GF1 192 aa6.59□□□□□ -1.35
NR1I3-228ENST00000511676 WFDC10AQ9H1F0 79 aa6.59□□□□□ -1.35
NR1I3-228ENST00000511676 MDFICQ9P1T7 246 aa6.59□□□□□ -1.35
NR1I3-228ENST00000511676 K7EMI3 77 aa6.58□□□□□ -1.36
NR1I3-228ENST00000511676 SMIM17P0DL12 118 aa6.58□□□□□ -1.36
NR1I3-228ENST00000511676 PMCHP20382 165 aa6.58□□□□□ -1.36
NR1I3-228ENST00000511676 EVI2AP22794 236 aa6.58□□□□□ -1.36
NR1I3-228ENST00000511676 CKS2P33552 79 aa6.58□□□□□ -1.36
NR1I3-228ENST00000511676 NDUFA6P56556 154 aa6.58□□□□□ -1.36
NR1I3-228ENST00000511676 RPL32P62910 135 aaKnown RBP6.58□□□□□ -1.36
NR1I3-228ENST00000511676 RRN3P1Q2M238 152 aa6.58□□□□□ -1.36
NR1I3-228ENST00000511676 ZNF876PQ49A33 203 aa6.58□□□□□ -1.36
NR1I3-228ENST00000511676 MRPL51Q4U2R6 128 aaKnown RBP6.58□□□□□ -1.36
NR1I3-228ENST00000511676 Q6ZWC4 215 aa6.58□□□□□ -1.36
NR1I3-228ENST00000511676 AMN1Q8IY45 258 aa6.58□□□□□ -1.36
NR1I3-228ENST00000511676 CHCHD1Q96BP2 118 aaKnown RBP6.58□□□□□ -1.36
NR1I3-228ENST00000511676 PRELID3AQ96N28 172 aa6.58□□□□□ -1.36
NR1I3-228ENST00000511676 TM2D3Q9BRN9 247 aa6.58□□□□□ -1.36
NR1I3-228ENST00000511676 MSRB1Q9NZV6 116 aa6.58□□□□□ -1.36
NR1I3-228ENST00000511676 TP53TG1Q9Y2A0 90 aa6.58□□□□□ -1.36
NR1I3-228ENST00000511676 KIF25-AS1Q9Y6Z4 181 aa6.58□□□□□ -1.36
NR1I3-228ENST00000511676 D6R8Y8 96 aa6.57□□□□□ -1.36
NR1I3-228ENST00000511676 RPL35AP18077 110 aaKnown RBP6.57□□□□□ -1.36
NR1I3-228ENST00000511676 SNRPEP62304 92 aaKnown RBP6.57□□□□□ -1.36
NR1I3-228ENST00000511676 ZFP2Q6ZN57 461 aa6.57□□□□□ -1.36
NR1I3-228ENST00000511676 BAGE3Q86Y29 109 aa6.57□□□□□ -1.36
NR1I3-228ENST00000511676 HIST3H2BBQ8N257 126 aa6.57□□□□□ -1.36
NR1I3-228ENST00000511676 C18orf15Q96N68 181 aa6.57□□□□□ -1.36
NR1I3-228ENST00000511676 C20orf78Q9BR46 151 aa6.57□□□□□ -1.36
NR1I3-228ENST00000511676 NXT2Q9NPJ8 142 aaKnown RBP6.57□□□□□ -1.36
NR1I3-228ENST00000511676 COL7A1Q02388 2944 aa6.56□□□□□ -1.36
NR1I3-228ENST00000511676 MUC21A0A0G2JKD1 596 aa6.56□□□□□ -1.36
NR1I3-228ENST00000511676 MUC21A0A140T8X8 626 aa6.56□□□□□ -1.36
NR1I3-228ENST00000511676 LOC105371267A0A1B0GV96 52 aa6.56□□□□□ -1.36
NR1I3-228ENST00000511676 LINC01546A6NGU7 62 aa6.56□□□□□ -1.36
NR1I3-228ENST00000511676 H7C1H1 209 aa6.56□□□□□ -1.36
NR1I3-228ENST00000511676 SPRY2O43597 315 aa6.56□□□□□ -1.36
NR1I3-228ENST00000511676 IGHV4-30-4P0DP06 118 aa6.56□□□□□ -1.36
NR1I3-228ENST00000511676 LINC00315P59091 139 aa6.56□□□□□ -1.36
NR1I3-228ENST00000511676 KIAA1644Q3SXP7 199 aa6.56□□□□□ -1.36
NR1I3-228ENST00000511676 TMEM18Q96B42 140 aa6.56□□□□□ -1.36
NR1I3-228ENST00000511676 OVOL2Q9BRP0 275 aa6.56□□□□□ -1.36
NR1I3-228ENST00000511676 MAP1LC3AQ9H492 121 aa6.56□□□□□ -1.36
NR1I3-228ENST00000511676 TIMM8BQ9Y5J9 83 aaPredicted RBP6.56□□□□□ -1.36
NR1I3-228ENST00000511676 TRBV6-5A0A0K0K1A5 114 aa6.55□□□□□ -1.36
NR1I3-228ENST00000511676 TEX48A0A1B0GUV7 120 aa6.55□□□□□ -1.36
NR1I3-228ENST00000511676 LINC01549A6NIU2 74 aa6.55□□□□□ -1.36
NR1I3-228ENST00000511676 TCAPO15273 167 aa6.55□□□□□ -1.36
NR1I3-228ENST00000511676 SERF1AO75920 110 aa6.55□□□□□ -1.36
NR1I3-228ENST00000511676 CRYGDP07320 174 aa6.55□□□□□ -1.36
NR1I3-228ENST00000511676 S100A2P29034 98 aa6.55□□□□□ -1.36
NR1I3-228ENST00000511676 UFSP1Q6NVU6 142 aa6.55□□□□□ -1.36
NR1I3-228ENST00000511676 C14orf178Q8N769 122 aaPredicted RBP6.55□□□□□ -1.36
NR1I3-228ENST00000511676 DNAH3Q8TD57 4116 aa6.55□□□□□ -1.36
NR1I3-228ENST00000511676 AGRNO00468 2067 aa6.54□□□□□ -1.36
NR1I3-228ENST00000511676 PLAC8L1A1L4L8 177 aa6.54□□□□□ -1.36
NR1I3-228ENST00000511676 LYRM9A8MSI8 78 aa6.54□□□□□ -1.36
NR1I3-228ENST00000511676 RS1O15537 224 aa6.54□□□□□ -1.36
NR1I3-228ENST00000511676 TNFRSF6BO95407 300 aa6.54□□□□□ -1.36
NR1I3-228ENST00000511676 LINC00614P0C842 121 aa6.54□□□□□ -1.36
NR1I3-228ENST00000511676 MIFP14174 115 aa6.54□□□□□ -1.36
NR1I3-228ENST00000511676 NRACQ8N912 160 aa6.54□□□□□ -1.36
NR1I3-228ENST00000511676 RNF183Q96D59 192 aa6.54□□□□□ -1.36
NR1I3-228ENST00000511676 AP5S1Q9NUS5 200 aa6.54□□□□□ -1.36
NR1I3-228ENST00000511676 IGHV3OR16-12A0A075B7B8 117 aa6.53□□□□□ -1.36
NR1I3-228ENST00000511676 TRAV4A0A0B4J268 109 aa6.53□□□□□ -1.36
NR1I3-228ENST00000511676 HSBP1O75506 76 aa6.53□□□□□ -1.36
NR1I3-228ENST00000511676 HTN1P15515 57 aa6.53□□□□□ -1.36
NR1I3-228ENST00000511676 AZU1P20160 251 aa6.53□□□□□ -1.36
NR1I3-228ENST00000511676 LINC00310P59036 64 aa6.53□□□□□ -1.36
NR1I3-228ENST00000511676 CFAP126Q5VTH2 177 aa6.53□□□□□ -1.36
NR1I3-228ENST00000511676 LINC00612Q8N6U2 182 aa6.53□□□□□ -1.36
NR1I3-228ENST00000511676 HIST1H2BLQ99880 126 aa6.53□□□□□ -1.36
NR1I3-228ENST00000511676 X6R8D5 127 aa6.53□□□□□ -1.36
NR1I3-228ENST00000511676 KMT2CQ8NEZ4 4911 aaKnown RBP6.53□□□□□ -1.36
NR1I3-228ENST00000511676 NPYP01303 97 aa6.52□□□□□ -1.37
NR1I3-228ENST00000511676 IGHV3-53P01767 116 aa6.52□□□□□ -1.37
NR1I3-228ENST00000511676 MGPP08493 103 aa6.52□□□□□ -1.37
NR1I3-228ENST00000511676 G0S2P27469 103 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms