RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 CASZ1Q86V15 1759 aa0.37□□□□□ -2.35
CHD1-207ENST00000511628 DLEC1Q9Y238 1755 aa0.37□□□□□ -2.35
CHD1-207ENST00000511628 CDK12Q9NYV4 1490 aaPredicted RBP0.37□□□□□ -2.35
CHD1-207ENST00000511628 F2Z2F3 143 aa0.37□□□□□ -2.35
CHD1-207ENST00000511628 HMGN1P05114 100 aa0.37□□□□□ -2.35
CHD1-207ENST00000511628 RPS25P62851 125 aaKnown RBP0.37□□□□□ -2.35
CHD1-207ENST00000511628 TSKUQ8WUA8 353 aa0.37□□□□□ -2.35
CHD1-207ENST00000511628 RPRMQ9NS64 109 aa0.37□□□□□ -2.35
CHD1-207ENST00000511628 PLAC8Q9NZF1 115 aa0.37□□□□□ -2.35
CHD1-207ENST00000511628 SCP2D1Q9UJQ7 156 aa0.37□□□□□ -2.35
CHD1-207ENST00000511628 SOGA1O94964 1423 aa0.37□□□□□ -2.35
CHD1-207ENST00000511628 PRG4Q92954 1404 aaPredicted RBP0.37□□□□□ -2.35
CHD1-207ENST00000511628 MED13LQ71F56 2210 aa0.37□□□□□ -2.35
CHD1-207ENST00000511628 NAV3Q8IVL0 2385 aa0.37□□□□□ -2.35
CHD1-207ENST00000511628 CEP152O94986 1710 aa0.36□□□□□ -2.35
CHD1-207ENST00000511628 TMEM2Q9UHN6 1383 aa0.36□□□□□ -2.35
CHD1-207ENST00000511628 MEGF8Q7Z7M0 2845 aa0.36□□□□□ -2.35
CHD1-207ENST00000511628 CADP27708 2225 aa0.36□□□□□ -2.35
CHD1-207ENST00000511628 PLXNA2O75051 1894 aa0.36□□□□□ -2.35
CHD1-207ENST00000511628 FAM236AA0A1B0GUQ0 79 aa0.36□□□□□ -2.35
CHD1-207ENST00000511628 FAM236BA0A1B0GV22 79 aa0.36□□□□□ -2.35
CHD1-207ENST00000511628 FAM92AA1XBS5 289 aa0.36□□□□□ -2.35
CHD1-207ENST00000511628 SNCGO76070 127 aa0.36□□□□□ -2.35
CHD1-207ENST00000511628 NDUFB6O95139 128 aa0.36□□□□□ -2.35
CHD1-207ENST00000511628 PIRTP0C851 137 aa0.36□□□□□ -2.35
CHD1-207ENST00000511628 EMX2Q04743 252 aa0.36□□□□□ -2.35
CHD1-207ENST00000511628 C9orf116Q5BN46 136 aaPredicted RBP0.36□□□□□ -2.35
CHD1-207ENST00000511628 SLC48A1Q6P1K1 146 aa0.36□□□□□ -2.35
CHD1-207ENST00000511628 SPTSSAQ969W0 71 aa0.36□□□□□ -2.35
CHD1-207ENST00000511628 IFI27L1Q96BM0 104 aa0.36□□□□□ -2.35
CHD1-207ENST00000511628 TSC22D3Q99576 134 aa0.36□□□□□ -2.35
CHD1-207ENST00000511628 SMR3AQ99954 134 aa0.36□□□□□ -2.35
CHD1-207ENST00000511628 TMEM242Q9NWH2 141 aa0.36□□□□□ -2.35
CHD1-207ENST00000511628 NDUFA12Q9UI09 145 aa0.36□□□□□ -2.35
CHD1-207ENST00000511628 USP24Q9UPU5 2620 aa0.36□□□□□ -2.35
CHD1-207ENST00000511628 DAPK1P53355 1430 aa0.36□□□□□ -2.35
CHD1-207ENST00000511628 DOCK11Q5JSL3 2073 aa0.36□□□□□ -2.35
CHD1-207ENST00000511628 MACF1Q9UPN3 7388 aaKnown RBP0.36□□□□□ -2.35
CHD1-207ENST00000511628 ERCC6Q03468 1493 aa0.35□□□□□ -2.35
CHD1-207ENST00000511628 TRAV12-3A0A0B4J271 114 aa0.35□□□□□ -2.35
CHD1-207ENST00000511628 IL5P05113 134 aa0.35□□□□□ -2.35
CHD1-207ENST00000511628 CCL3L1P16619 93 aa0.35□□□□□ -2.35
CHD1-207ENST00000511628 CBLN1P23435 193 aa0.35□□□□□ -2.35
CHD1-207ENST00000511628 ELOF1P60002 83 aaKnown RBP0.35□□□□□ -2.35
CHD1-207ENST00000511628 MIC13Q5XKP0 118 aa0.35□□□□□ -2.35
CHD1-207ENST00000511628 Q6ZUT4 128 aa0.35□□□□□ -2.35
CHD1-207ENST00000511628 COX7B2Q8TF08 81 aa0.35□□□□□ -2.35
CHD1-207ENST00000511628 C1orf54Q8WWF1 131 aa0.35□□□□□ -2.35
CHD1-207ENST00000511628 PRR15LQ9BU68 103 aa0.35□□□□□ -2.35
CHD1-207ENST00000511628 BPESC1Q9GZL8 116 aa0.35□□□□□ -2.35
CHD1-207ENST00000511628 V9GYV3 84 aa0.35□□□□□ -2.35
CHD1-207ENST00000511628 MYH6P13533 1939 aa0.34□□□□□ -2.35
CHD1-207ENST00000511628 TRBV7-1A0A0A6YYK4 115 aa0.34□□□□□ -2.36
CHD1-207ENST00000511628 PHGR1C9JFL3 82 aa0.34□□□□□ -2.36
CHD1-207ENST00000511628 APODP05090 189 aa0.34□□□□□ -2.36
CHD1-207ENST00000511628 SMIM6P0DI80 62 aa0.34□□□□□ -2.36
CHD1-207ENST00000511628 ZNF818PQ6ZRF7 136 aa0.34□□□□□ -2.36
CHD1-207ENST00000511628 VMO1Q7Z5L0 202 aa0.34□□□□□ -2.36
CHD1-207ENST00000511628 C20orf197Q8N268 126 aa0.34□□□□□ -2.36
CHD1-207ENST00000511628 ARL11Q969Q4 196 aa0.34□□□□□ -2.36
CHD1-207ENST00000511628 KMT2DO14686 5537 aa0.34□□□□□ -2.36
CHD1-207ENST00000511628 APCP25054 2843 aa0.34□□□□□ -2.36
CHD1-207ENST00000511628 KIF13AQ9H1H9 1805 aa0.34□□□□□ -2.36
CHD1-207ENST00000511628 KCPQ6ZWJ8 1503 aa0.33□□□□□ -2.36
CHD1-207ENST00000511628 NAIPQ13075 1403 aa0.33□□□□□ -2.36
CHD1-207ENST00000511628 FAM25AB3EWG3 89 aa0.33□□□□□ -2.36
CHD1-207ENST00000511628 FAM25CB3EWG5 89 aa0.33□□□□□ -2.36
CHD1-207ENST00000511628 FAM25GB3EWG6 89 aa0.33□□□□□ -2.36
CHD1-207ENST00000511628 SARNPP82979 210 aaKnown RBP0.33□□□□□ -2.36
CHD1-207ENST00000511628 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.33□□□□□ -2.36
CHD1-207ENST00000511628 SMIM11BQ8TCY0 68 aa0.33□□□□□ -2.36
CHD1-207ENST00000511628 DPH3Q96FX2 82 aa0.33□□□□□ -2.36
CHD1-207ENST00000511628 SDF2Q99470 211 aa0.33□□□□□ -2.36
CHD1-207ENST00000511628 NAV2Q8IVL1 2488 aa0.33□□□□□ -2.36
CHD1-207ENST00000511628 KDM6BO15054 1643 aa0.33□□□□□ -2.36
CHD1-207ENST00000511628 CDK13Q14004 1512 aaKnown RBP0.33□□□□□ -2.36
CHD1-207ENST00000511628 RBBP6Q7Z6E9 1792 aaKnown RBP0.32□□□□□ -2.36
CHD1-207ENST00000511628 MYH9P35579 1960 aaKnown RBP0.32□□□□□ -2.36
CHD1-207ENST00000511628 F5P12259 2224 aa0.32□□□□□ -2.36
CHD1-207ENST00000511628 EFCAB10A6NFE3 127 aa0.32□□□□□ -2.36
CHD1-207ENST00000511628 APOC4-APOC2K7ER74 178 aa0.32□□□□□ -2.36
CHD1-207ENST00000511628 M0R129 80 aa0.32□□□□□ -2.36
CHD1-207ENST00000511628 PITX3O75364 302 aa0.32□□□□□ -2.36
CHD1-207ENST00000511628 NPC2P61916 151 aa0.32□□□□□ -2.36
CHD1-207ENST00000511628 UBE2G1P62253 170 aa0.32□□□□□ -2.36
CHD1-207ENST00000511628 CCL8P80075 99 aa0.32□□□□□ -2.36
CHD1-207ENST00000511628 C12orf73Q69YU5 71 aa0.32□□□□□ -2.36
CHD1-207ENST00000511628 SPINK6Q6UWN8 80 aa0.32□□□□□ -2.36
CHD1-207ENST00000511628 SNRNP25Q9BV90 132 aaKnown RBP0.32□□□□□ -2.36
CHD1-207ENST00000511628 LINC00470Q9BZP3 86 aa0.32□□□□□ -2.36
CHD1-207ENST00000511628 RERGLQ9H628 205 aa0.32□□□□□ -2.36
CHD1-207ENST00000511628 NAA60Q9H7X0 242 aa0.32□□□□□ -2.36
CHD1-207ENST00000511628 TANC1Q9C0D5 1861 aa0.32□□□□□ -2.36
CHD1-207ENST00000511628 MDN1Q9NU22 5596 aa0.32□□□□□ -2.36
CHD1-207ENST00000511628 ADGRB1O14514 1584 aa0.32□□□□□ -2.36
CHD1-207ENST00000511628 TNCP24821 2201 aa0.32□□□□□ -2.36
CHD1-207ENST00000511628 ZNF142P52746 1687 aaPredicted RBP0.31□□□□□ -2.36
CHD1-207ENST00000511628 PTPRMP28827 1452 aa0.31□□□□□ -2.36
CHD1-207ENST00000511628 TRBV10-3A0A0K0K1G6 114 aa0.31□□□□□ -2.36
CHD1-207ENST00000511628 K7EP13 123 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms