RNA–Protein interactions for RNA: ENST00000510779.1

SH3TC2-208, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 3,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-208ENST00000510779 IFITM1P13164 125 aa9.28□□□□□ -0.92
SH3TC2-208ENST00000510779 EEF1AKMT3Q96AZ1 226 aa9.28□□□□□ -0.92
SH3TC2-208ENST00000510779 CCDC140Q96MF4 163 aa9.28□□□□□ -0.92
SH3TC2-208ENST00000510779 PAPPA-AS1Q5QFB9 102 aa9.28□□□□□ -0.92
SH3TC2-208ENST00000510779 C9orf47Q6ZRZ4 202 aa9.28□□□□□ -0.92
SH3TC2-208ENST00000510779 Q8N1Y9 231 aa9.28□□□□□ -0.92
SH3TC2-208ENST00000510779 SLC25A29Q8N8R3 303 aa9.28□□□□□ -0.92
SH3TC2-208ENST00000510779 IGLV4-69A0A075B6H9 119 aa9.27□□□□□ -0.93
SH3TC2-208ENST00000510779 GRNP28799 593 aaKnown RBP9.27□□□□□ -0.93
SH3TC2-208ENST00000510779 MUSTN1Q8IVN3 82 aa9.27□□□□□ -0.93
SH3TC2-208ENST00000510779 C15orf53Q8NAA6 179 aa9.27□□□□□ -0.93
SH3TC2-208ENST00000510779 IGKV3-20P01619 116 aa9.27□□□□□ -0.93
SH3TC2-208ENST00000510779 TMEM219Q86XT9 240 aa9.27□□□□□ -0.93
SH3TC2-208ENST00000510779 Q8N9W7 124 aa9.27□□□□□ -0.93
SH3TC2-208ENST00000510779 IGHV4-4A0A075B6R2 117 aa9.26□□□□□ -0.93
SH3TC2-208ENST00000510779 TSHBP01222 138 aa9.26□□□□□ -0.93
SH3TC2-208ENST00000510779 HERV-K104P63124 156 aa9.26□□□□□ -0.93
SH3TC2-208ENST00000510779 IGFL3Q6UXB1 125 aa9.26□□□□□ -0.93
SH3TC2-208ENST00000510779 ZNRF2Q8NHG8 242 aa9.26□□□□□ -0.93
SH3TC2-208ENST00000510779 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.26□□□□□ -0.93
SH3TC2-208ENST00000510779 SDHAF1A6NFY7 115 aa9.26□□□□□ -0.93
SH3TC2-208ENST00000510779 IGHV3-11P01762 117 aa9.26□□□□□ -0.93
SH3TC2-208ENST00000510779 FAM159AQ6UWV7 190 aa9.26□□□□□ -0.93
SH3TC2-208ENST00000510779 ELANEP08246 267 aa9.25□□□□□ -0.93
SH3TC2-208ENST00000510779 ZNF56Q15929 161 aa9.25□□□□□ -0.93
SH3TC2-208ENST00000510779 FAM110DQ8TAY7 271 aaPredicted RBP9.25□□□□□ -0.93
SH3TC2-208ENST00000510779 IGHV3OR16-10A0A075B7F0 116 aa9.25□□□□□ -0.93
SH3TC2-208ENST00000510779 RHODO00212 210 aa9.25□□□□□ -0.93
SH3TC2-208ENST00000510779 NHLRC4P0CG21 123 aaPredicted RBP9.25□□□□□ -0.93
SH3TC2-208ENST00000510779 PPP1R17O96001 155 aa9.25□□□□□ -0.93
SH3TC2-208ENST00000510779 IGHV3-33P01772 117 aa9.25□□□□□ -0.93
SH3TC2-208ENST00000510779 ATXN8Q156A1 80 aa9.25□□□□□ -0.93
SH3TC2-208ENST00000510779 C2orf82Q6UX34 121 aa9.25□□□□□ -0.93
SH3TC2-208ENST00000510779 ZFAND2AQ8N6M9 145 aa9.25□□□□□ -0.93
SH3TC2-208ENST00000510779 LINC01620Q4KN68 170 aa9.24□□□□□ -0.93
SH3TC2-208ENST00000510779 VCYO14598 125 aa9.24□□□□□ -0.93
SH3TC2-208ENST00000510779 LY6G5BQ8NDX9 201 aa9.24□□□□□ -0.93
SH3TC2-208ENST00000510779 LINC00477Q96M19 166 aa9.24□□□□□ -0.93
SH3TC2-208ENST00000510779 SPXQ9BT56 116 aa9.24□□□□□ -0.93
SH3TC2-208ENST00000510779 SUMO4Q6EEV6 95 aa9.23□□□□□ -0.93
SH3TC2-208ENST00000510779 C9orf139Q6ZV77 190 aa9.23□□□□□ -0.93
SH3TC2-208ENST00000510779 GPHB5Q86YW7 130 aa9.23□□□□□ -0.93
SH3TC2-208ENST00000510779 ZNF580Q9UK33 172 aa9.23□□□□□ -0.93
SH3TC2-208ENST00000510779 ATRXP46100 2492 aa9.23□□□□□ -0.93
SH3TC2-208ENST00000510779 TRBV7-9A0A0J9YWB2 115 aa9.23□□□□□ -0.93
SH3TC2-208ENST00000510779 UNQ9165/PRO28630Q6UXU0 137 aa9.23□□□□□ -0.93
SH3TC2-208ENST00000510779 PIP4P1Q86T03 277 aa9.23□□□□□ -0.93
SH3TC2-208ENST00000510779 CITED1Q99966 193 aa9.23□□□□□ -0.93
SH3TC2-208ENST00000510779 NOTCH3Q9UM47 2321 aa9.23□□□□□ -0.93
SH3TC2-208ENST00000510779 TRAV12-3A0A0B4J271 114 aa9.23□□□□□ -0.93
SH3TC2-208ENST00000510779 IGIPA6NJ69 53 aa9.23□□□□□ -0.93
SH3TC2-208ENST00000510779 ODF3BA8MYP8 253 aa9.23□□□□□ -0.93
SH3TC2-208ENST00000510779 RNF223E7ERA6 249 aa9.23□□□□□ -0.93
SH3TC2-208ENST00000510779 H3BMM0 161 aa9.23□□□□□ -0.93
SH3TC2-208ENST00000510779 UBE2WQ96B02 151 aa9.23□□□□□ -0.93
SH3TC2-208ENST00000510779 A0A0J9YXV3 536 aa9.22□□□□□ -0.93
SH3TC2-208ENST00000510779 M0R1W7 72 aa9.22□□□□□ -0.93
SH3TC2-208ENST00000510779 HTN1P15515 57 aa9.22□□□□□ -0.93
SH3TC2-208ENST00000510779 TRBV12-3P01733 135 aa9.22□□□□□ -0.93
SH3TC2-208ENST00000510779 RNASE3P12724 160 aaKnown RBP9.22□□□□□ -0.93
SH3TC2-208ENST00000510779 NBL1P41271 181 aa9.22□□□□□ -0.93
SH3TC2-208ENST00000510779 MEIG1Q5JSS6 88 aa9.22□□□□□ -0.93
SH3TC2-208ENST00000510779 DUX3Q96PT4 197 aa9.22□□□□□ -0.93
SH3TC2-208ENST00000510779 RNASE13Q5GAN3 156 aaKnown RBP9.21□□□□□ -0.93
SH3TC2-208ENST00000510779 SBSPONQ8IVN8 264 aa9.21□□□□□ -0.93
SH3TC2-208ENST00000510779 MRPL53Q96EL3 112 aaKnown RBP9.21□□□□□ -0.94
SH3TC2-208ENST00000510779 TMEM141Q96I45 108 aa9.21□□□□□ -0.94
SH3TC2-208ENST00000510779 UBTD1Q9HAC8 227 aa9.21□□□□□ -0.94
SH3TC2-208ENST00000510779 IGHV1-69DA0A0B4J2H0 117 aa9.2□□□□□ -0.94
SH3TC2-208ENST00000510779 ZFP36P26651 326 aaKnown RBP9.2□□□□□ -0.94
SH3TC2-208ENST00000510779 TRBV7-1A0A0A6YYK4 115 aa9.2□□□□□ -0.94
SH3TC2-208ENST00000510779 OVOL1O14753 267 aa9.2□□□□□ -0.94
SH3TC2-208ENST00000510779 TRIAP1O43715 76 aa9.2□□□□□ -0.94
SH3TC2-208ENST00000510779 SAA4P35542 130 aa9.2□□□□□ -0.94
SH3TC2-208ENST00000510779 RPL32P62910 135 aaKnown RBP9.2□□□□□ -0.94
SH3TC2-208ENST00000510779 Q6ZSV7 163 aa9.2□□□□□ -0.94
SH3TC2-208ENST00000510779 Q8N6K4 173 aa9.2□□□□□ -0.94
SH3TC2-208ENST00000510779 TMEM263Q8WUH6 116 aaKnown RBP9.2□□□□□ -0.94
SH3TC2-208ENST00000510779 SPG11Q96JI7 2443 aa9.2□□□□□ -0.94
SH3TC2-208ENST00000510779 CLEC2BQ92478 149 aa9.2□□□□□ -0.94
SH3TC2-208ENST00000510779 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.19□□□□□ -0.94
SH3TC2-208ENST00000510779 FOXC1Q12948 553 aa9.19□□□□□ -0.94
SH3TC2-208ENST00000510779 ZNF876PQ49A33 203 aa9.19□□□□□ -0.94
SH3TC2-208ENST00000510779 CHCHD5Q9BSY4 110 aa9.19□□□□□ -0.94
SH3TC2-208ENST00000510779 COL12A1Q99715 3063 aa9.19□□□□□ -0.94
SH3TC2-208ENST00000510779 EIF4EBP3O60516 100 aaPredicted RBP9.19□□□□□ -0.94
SH3TC2-208ENST00000510779 COX6CP09669 75 aa9.19□□□□□ -0.94
SH3TC2-208ENST00000510779 MUC4Q99102 2169 aa9.19□□□□□ -0.94
SH3TC2-208ENST00000510779 TRAV12-2A0A075B6T6 113 aa9.18□□□□□ -0.94
SH3TC2-208ENST00000510779 DOPEY2Q9Y3R5 2298 aa9.18□□□□□ -0.94
SH3TC2-208ENST00000510779 TRAV8-3A0A0A6YYJ7 113 aa9.18□□□□□ -0.94
SH3TC2-208ENST00000510779 IGHV3-73A0A0B4J1V6 119 aa9.18□□□□□ -0.94
SH3TC2-208ENST00000510779 M0R2P5 195 aa9.18□□□□□ -0.94
SH3TC2-208ENST00000510779 LENEPQ9Y5L5 61 aa9.18□□□□□ -0.94
SH3TC2-208ENST00000510779 C2CD3Q4AC94 2353 aa9.18□□□□□ -0.94
SH3TC2-208ENST00000510779 A0A0U1RRA0 63 aa9.18□□□□□ -0.94
SH3TC2-208ENST00000510779 LEPROTO15243 131 aa9.18□□□□□ -0.94
SH3TC2-208ENST00000510779 UBE2E1P51965 193 aa9.18□□□□□ -0.94
SH3TC2-208ENST00000510779 POLR2KP53803 58 aaKnown RBP9.18□□□□□ -0.94
SH3TC2-208ENST00000510779 MINOS1Q5TGZ0 78 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms