RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 C15orf54Q8N8G6 183 aa6.21□□□□□ -1.42
SCAMP1-202ENST00000506858 OR4C5Q8NGB2 326 aa6.21□□□□□ -1.42
SCAMP1-202ENST00000506858 SACSQ9NZJ4 4579 aa6.2□□□□□ -1.42
SCAMP1-202ENST00000506858 DNAH1Q9P2D7 4330 aa6.2□□□□□ -1.42
SCAMP1-202ENST00000506858 TRAV10A0A0B4J240 114 aa6.2□□□□□ -1.42
SCAMP1-202ENST00000506858 A8MWL6 223 aa6.2□□□□□ -1.42
SCAMP1-202ENST00000506858 RS1O15537 224 aa6.2□□□□□ -1.42
SCAMP1-202ENST00000506858 APOC3P02656 99 aa6.2□□□□□ -1.42
SCAMP1-202ENST00000506858 CXCL1P09341 107 aa6.2□□□□□ -1.42
SCAMP1-202ENST00000506858 FHL2Q14192 279 aa6.2□□□□□ -1.42
SCAMP1-202ENST00000506858 C10orf91Q5T1B1 145 aa6.2□□□□□ -1.42
SCAMP1-202ENST00000506858 FAM74A4Q5TZK3 123 aa6.2□□□□□ -1.42
SCAMP1-202ENST00000506858 TMEM88Q6PEY1 159 aa6.2□□□□□ -1.42
SCAMP1-202ENST00000506858 CEMP1Q6PRD7 247 aaPredicted RBP6.2□□□□□ -1.42
SCAMP1-202ENST00000506858 C14orf178Q8N769 122 aaPredicted RBP6.2□□□□□ -1.42
SCAMP1-202ENST00000506858 TSKUQ8WUA8 353 aa6.2□□□□□ -1.42
SCAMP1-202ENST00000506858 TRAV26-1A0A087WT03 109 aa6.19□□□□□ -1.42
SCAMP1-202ENST00000506858 TRGV4A0A0C4DH28 118 aa6.19□□□□□ -1.42
SCAMP1-202ENST00000506858 LOC100131303A0A0U1RQF7 123 aa6.19□□□□□ -1.42
SCAMP1-202ENST00000506858 XKRY2A2RUG3 117 aa6.19□□□□□ -1.42
SCAMP1-202ENST00000506858 HIGD1CA8MV81 97 aa6.19□□□□□ -1.42
SCAMP1-202ENST00000506858 OR5AL1P0C617 328 aa6.19□□□□□ -1.42
SCAMP1-202ENST00000506858 NTF3P20783 257 aa6.19□□□□□ -1.42
SCAMP1-202ENST00000506858 FAM3BP58499 235 aaPredicted RBP6.19□□□□□ -1.42
SCAMP1-202ENST00000506858 CASC10Q5T4H9 136 aa6.19□□□□□ -1.42
SCAMP1-202ENST00000506858 ZFP82Q8N141 532 aa6.19□□□□□ -1.42
SCAMP1-202ENST00000506858 NUP35Q8NFH5 326 aa6.19□□□□□ -1.42
SCAMP1-202ENST00000506858 TRAV4A0A0B4J268 109 aa6.18□□□□□ -1.42
SCAMP1-202ENST00000506858 TEX48A0A1B0GUV7 120 aa6.18□□□□□ -1.42
SCAMP1-202ENST00000506858 C7orf77A4D0Y5 90 aa6.18□□□□□ -1.42
SCAMP1-202ENST00000506858 CRYGDP07320 174 aa6.18□□□□□ -1.42
SCAMP1-202ENST00000506858 P0DMU3 169 aa6.18□□□□□ -1.42
SCAMP1-202ENST00000506858 FAM231AP0DMU4 169 aa6.18□□□□□ -1.42
SCAMP1-202ENST00000506858 FAM231CP0DMU5 169 aa6.18□□□□□ -1.42
SCAMP1-202ENST00000506858 MED14OSP0DP75 135 aa6.18□□□□□ -1.42
SCAMP1-202ENST00000506858 EVI2AP22794 236 aa6.18□□□□□ -1.42
SCAMP1-202ENST00000506858 CTRLP40313 264 aa6.18□□□□□ -1.42
SCAMP1-202ENST00000506858 TWIST1Q15672 202 aa6.18□□□□□ -1.42
SCAMP1-202ENST00000506858 ATRAIDQ6UW56 229 aa6.18□□□□□ -1.42
SCAMP1-202ENST00000506858 SYT8Q8NBV8 401 aa6.18□□□□□ -1.42
SCAMP1-202ENST00000506858 VSIG2Q96IQ7 327 aa6.18□□□□□ -1.42
SCAMP1-202ENST00000506858 CARHSP1Q9Y2V2 147 aaKnown RBP6.18□□□□□ -1.42
SCAMP1-202ENST00000506858 IGHV4-4A0A075B6R2 117 aa6.17□□□□□ -1.42
SCAMP1-202ENST00000506858 A0A096LPF7 62 aa6.17□□□□□ -1.42
SCAMP1-202ENST00000506858 A0A1W2PPQ1 181 aa6.17□□□□□ -1.42
SCAMP1-202ENST00000506858 SMIM27A0A1W2PRY6 76 aa6.17□□□□□ -1.42
SCAMP1-202ENST00000506858 NXPH4O95158 308 aa6.17□□□□□ -1.42
SCAMP1-202ENST00000506858 MT-ND4LP03901 98 aa6.17□□□□□ -1.42
SCAMP1-202ENST00000506858 PNRC1Q12796 327 aaPredicted RBP6.17□□□□□ -1.42
SCAMP1-202ENST00000506858 CT83Q5H943 113 aa6.17□□□□□ -1.42
SCAMP1-202ENST00000506858 CLRN3Q8NCR9 226 aa6.17□□□□□ -1.42
SCAMP1-202ENST00000506858 PTH2Q96A98 100 aa6.17□□□□□ -1.42
SCAMP1-202ENST00000506858 HHLA3Q9XRX5 114 aa6.17□□□□□ -1.42
SCAMP1-202ENST00000506858 F2Z2F3 143 aa6.17□□□□□ -1.42
SCAMP1-202ENST00000506858 NUDT3O95989 172 aa6.17□□□□□ -1.42
SCAMP1-202ENST00000506858 MGPP08493 103 aa6.17□□□□□ -1.42
SCAMP1-202ENST00000506858 LINC00315P59091 139 aa6.17□□□□□ -1.42
SCAMP1-202ENST00000506858 UFSP1Q6NVU6 142 aa6.17□□□□□ -1.42
SCAMP1-202ENST00000506858 MRPL54Q6P161 138 aaKnown RBP6.17□□□□□ -1.42
SCAMP1-202ENST00000506858 C18orf15Q96N68 181 aa6.17□□□□□ -1.42
SCAMP1-202ENST00000506858 RPS10P5Q9NQ39 176 aa6.17□□□□□ -1.42
SCAMP1-202ENST00000506858 KIF25-AS1Q9Y6Z4 181 aa6.17□□□□□ -1.42
SCAMP1-202ENST00000506858 KMT2CQ8NEZ4 4911 aaKnown RBP6.16□□□□□ -1.42
SCAMP1-202ENST00000506858 ALMS1Q8TCU4 4167 aa6.16□□□□□ -1.42
SCAMP1-202ENST00000506858 A8MWV9 139 aa6.16□□□□□ -1.42
SCAMP1-202ENST00000506858 C3orf84H3BNL1 204 aa6.16□□□□□ -1.42
SCAMP1-202ENST00000506858 CAMPP49913 170 aa6.16□□□□□ -1.42
SCAMP1-202ENST00000506858 CRYBA4P53673 196 aa6.16□□□□□ -1.42
SCAMP1-202ENST00000506858 CACNG7P62955 275 aa6.16□□□□□ -1.42
SCAMP1-202ENST00000506858 SLC25A29Q8N8R3 303 aa6.16□□□□□ -1.42
SCAMP1-202ENST00000506858 APLNQ9ULZ1 77 aa6.16□□□□□ -1.42
SCAMP1-202ENST00000506858 URGCP-MRPS24S4R325 110 aa6.16□□□□□ -1.42
SCAMP1-202ENST00000506858 TRAV26-2A0A0B4J265 109 aa6.15□□□□□ -1.42
SCAMP1-202ENST00000506858 A0A1B0GUT8 65 aa6.15□□□□□ -1.42
SCAMP1-202ENST00000506858 NUPR2A6NF83 97 aa6.15□□□□□ -1.42
SCAMP1-202ENST00000506858 F5H697 171 aa6.15□□□□□ -1.42
SCAMP1-202ENST00000506858 GAS8-AS1O95177 125 aa6.15□□□□□ -1.42
SCAMP1-202ENST00000506858 GYPEP15421 78 aa6.15□□□□□ -1.42
SCAMP1-202ENST00000506858 GATA1P15976 413 aaPredicted RBP6.15□□□□□ -1.42
SCAMP1-202ENST00000506858 DEFB104AQ8WTQ1 72 aa6.15□□□□□ -1.42
SCAMP1-202ENST00000506858 GFRA4Q9GZZ7 299 aa6.15□□□□□ -1.42
SCAMP1-202ENST00000506858 NAT8BQ9UHF3 227 aa6.15□□□□□ -1.42
SCAMP1-202ENST00000506858 KLK5Q9Y337 293 aaPredicted RBP6.15□□□□□ -1.42
SCAMP1-202ENST00000506858 PPP1R2P9O14990 202 aa6.14□□□□□ -1.43
SCAMP1-202ENST00000506858 ZNF56Q15929 161 aa6.14□□□□□ -1.43
SCAMP1-202ENST00000506858 NDUFA5Q16718 116 aa6.14□□□□□ -1.43
SCAMP1-202ENST00000506858 ANAPC16Q96DE5 110 aa6.14□□□□□ -1.43
SCAMP1-202ENST00000506858 AP1S3Q96PC3 154 aa6.14□□□□□ -1.43
SCAMP1-202ENST00000506858 CNFNQ9BYD5 112 aa6.14□□□□□ -1.43
SCAMP1-202ENST00000506858 PRO0255Q9UI72 69 aa6.14□□□□□ -1.43
SCAMP1-202ENST00000506858 GAGE12JA6NER3 117 aa6.14□□□□□ -1.43
SCAMP1-202ENST00000506858 GAGE1Q13065 139 aa6.14□□□□□ -1.43
SCAMP1-202ENST00000506858 GAGE4Q13068 117 aa6.14□□□□□ -1.43
SCAMP1-202ENST00000506858 GAGE5Q13069 117 aa6.14□□□□□ -1.43
SCAMP1-202ENST00000506858 GAGE13Q4V321 117 aa6.14□□□□□ -1.43
SCAMP1-202ENST00000506858 PIK3CD-AS1Q5SR53 167 aa6.14□□□□□ -1.43
SCAMP1-202ENST00000506858 SUMO4Q6EEV6 95 aa6.14□□□□□ -1.43
SCAMP1-202ENST00000506858 WDR73Q6P4I2 378 aa6.14□□□□□ -1.43
SCAMP1-202ENST00000506858 BORCS7Q96B45 105 aa6.14□□□□□ -1.43
SCAMP1-202ENST00000506858 NDUFAF3Q9BU61 184 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms