RNA–Protein interactions for RNA: ENST00000506400.1

TRIM23-205, Transcript of tripartite motif containing 23, humanhuman

TSL 4

Gene TRIM23, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-205ENST00000506400 CRYGDP07320 174 aa7.9□□□□□ -1.14
TRIM23-205ENST00000506400 FAM3BP58499 235 aaPredicted RBP7.9□□□□□ -1.14
TRIM23-205ENST00000506400 FHL2Q14192 279 aa7.9□□□□□ -1.14
TRIM23-205ENST00000506400 ATP5L2Q7Z4Y8 100 aa7.9□□□□□ -1.14
TRIM23-205ENST00000506400 C14orf178Q8N769 122 aaPredicted RBP7.9□□□□□ -1.14
TRIM23-205ENST00000506400 MUC7Q8TAX7 377 aa7.9□□□□□ -1.14
TRIM23-205ENST00000506400 BTF3L4Q96K17 158 aa7.9□□□□□ -1.14
TRIM23-205ENST00000506400 FAM210BQ96KR6 192 aa7.9□□□□□ -1.14
TRIM23-205ENST00000506400 MSRB1Q9NZV6 116 aa7.9□□□□□ -1.14
TRIM23-205ENST00000506400 A0A087WWL8 130 aa7.89□□□□□ -1.15
TRIM23-205ENST00000506400 NUPR2A6NF83 97 aa7.89□□□□□ -1.15
TRIM23-205ENST00000506400 HOXA5P20719 270 aa7.89□□□□□ -1.15
TRIM23-205ENST00000506400 FAM74A4Q5TZK3 123 aa7.89□□□□□ -1.15
TRIM23-205ENST00000506400 UFSP1Q6NVU6 142 aa7.89□□□□□ -1.15
TRIM23-205ENST00000506400 CEMP1Q6PRD7 247 aaPredicted RBP7.89□□□□□ -1.15
TRIM23-205ENST00000506400 SAMD10Q9BYL1 202 aa7.89□□□□□ -1.15
TRIM23-205ENST00000506400 DPH3P1Q9H4G8 78 aa7.89□□□□□ -1.15
TRIM23-205ENST00000506400 PRO0255Q9UI72 69 aa7.89□□□□□ -1.15
TRIM23-205ENST00000506400 HHLA3Q9XRX5 114 aa7.89□□□□□ -1.15
TRIM23-205ENST00000506400 KLK5Q9Y337 293 aaPredicted RBP7.89□□□□□ -1.15
TRIM23-205ENST00000506400 IGHV3-73A0A0B4J1V6 119 aa7.88□□□□□ -1.15
TRIM23-205ENST00000506400 GATA1P15976 413 aaPredicted RBP7.88□□□□□ -1.15
TRIM23-205ENST00000506400 EVI2AP22794 236 aa7.88□□□□□ -1.15
TRIM23-205ENST00000506400 S100A1P23297 94 aa7.88□□□□□ -1.15
TRIM23-205ENST00000506400 HBBP68871 147 aa7.88□□□□□ -1.15
TRIM23-205ENST00000506400 MRPL54Q6P161 138 aaKnown RBP7.88□□□□□ -1.15
TRIM23-205ENST00000506400 ATRAIDQ6UW56 229 aa7.88□□□□□ -1.15
TRIM23-205ENST00000506400 TMEM191AQ9H0A3 160 aa7.88□□□□□ -1.15
TRIM23-205ENST00000506400 KIF25-AS1Q9Y6Z4 181 aa7.88□□□□□ -1.15
TRIM23-205ENST00000506400 TRBV6-4A0A1B0GX49 114 aa7.87□□□□□ -1.15
TRIM23-205ENST00000506400 A0A1B0GXF2 115 aa7.87□□□□□ -1.15
TRIM23-205ENST00000506400 H3BNG1 76 aa7.87□□□□□ -1.15
TRIM23-205ENST00000506400 C3orf84H3BNL1 204 aa7.87□□□□□ -1.15
TRIM23-205ENST00000506400 CAMPP49913 170 aa7.87□□□□□ -1.15
TRIM23-205ENST00000506400 CRYBA4P53673 196 aa7.87□□□□□ -1.15
TRIM23-205ENST00000506400 RAB4BP61018 213 aa7.87□□□□□ -1.15
TRIM23-205ENST00000506400 ZNF56Q15929 161 aa7.87□□□□□ -1.15
TRIM23-205ENST00000506400 RASL11AQ6T310 242 aa7.87□□□□□ -1.15
TRIM23-205ENST00000506400 URGCP-MRPS24S4R325 110 aa7.87□□□□□ -1.15
TRIM23-205ENST00000506400 DNAH9Q9NYC9 4486 aa7.86□□□□□ -1.15
TRIM23-205ENST00000506400 TRAV26-1A0A087WT03 109 aa7.86□□□□□ -1.15
TRIM23-205ENST00000506400 F5H697 171 aa7.86□□□□□ -1.15
TRIM23-205ENST00000506400 PAX4O43316 350 aa7.86□□□□□ -1.15
TRIM23-205ENST00000506400 MGPP08493 103 aa7.86□□□□□ -1.15
TRIM23-205ENST00000506400 TCTAP57738 103 aa7.86□□□□□ -1.15
TRIM23-205ENST00000506400 LINC00315P59091 139 aa7.86□□□□□ -1.15
TRIM23-205ENST00000506400 RHOHQ15669 191 aa7.86□□□□□ -1.15
TRIM23-205ENST00000506400 GATD1Q8NB37 220 aa7.86□□□□□ -1.15
TRIM23-205ENST00000506400 FRZBQ92765 325 aa7.86□□□□□ -1.15
TRIM23-205ENST00000506400 PRADC1Q9BSG0 188 aa7.86□□□□□ -1.15
TRIM23-205ENST00000506400 SMCO4Q9NRQ5 59 aa7.86□□□□□ -1.15
TRIM23-205ENST00000506400 IGLL5B9A064 214 aa7.85□□□□□ -1.15
TRIM23-205ENST00000506400 H7C1H1 209 aa7.85□□□□□ -1.15
TRIM23-205ENST00000506400 K7EQD1 137 aa7.85□□□□□ -1.15
TRIM23-205ENST00000506400 ATP6V1G1O75348 118 aa7.85□□□□□ -1.15
TRIM23-205ENST00000506400 COX19Q49B96 90 aa7.85□□□□□ -1.15
TRIM23-205ENST00000506400 ZFAND6Q6FIF0 208 aa7.85□□□□□ -1.15
TRIM23-205ENST00000506400 TMEM88Q6PEY1 159 aa7.85□□□□□ -1.15
TRIM23-205ENST00000506400 SLC25A29Q8N8R3 303 aa7.85□□□□□ -1.15
TRIM23-205ENST00000506400 C15orf53Q8NAA6 179 aa7.85□□□□□ -1.15
TRIM23-205ENST00000506400 HUWE1Q7Z6Z7 4374 aaKnown RBP7.85□□□□□ -1.15
TRIM23-205ENST00000506400 A0A0J9YY99 117 aa7.84□□□□□ -1.15
TRIM23-205ENST00000506400 TRBV10-1A0A0K0K1A3 114 aa7.84□□□□□ -1.15
TRIM23-205ENST00000506400 ELOBQ15370 118 aa7.84□□□□□ -1.15
TRIM23-205ENST00000506400 FAM104BQ5XKR9 115 aa7.84□□□□□ -1.15
TRIM23-205ENST00000506400 Q6ZSN1 163 aa7.84□□□□□ -1.15
TRIM23-205ENST00000506400 VSIG2Q96IQ7 327 aa7.84□□□□□ -1.15
TRIM23-205ENST00000506400 NBEAL2Q6ZNJ1 2754 aa7.84□□□□□ -1.15
TRIM23-205ENST00000506400 PRKDCP78527 4128 aaKnown RBP7.83□□□□□ -1.16
TRIM23-205ENST00000506400 MUC4Q99102 2169 aa7.83□□□□□ -1.16
TRIM23-205ENST00000506400 TRBV24-1A0A075B6N3 115 aa7.83□□□□□ -1.16
TRIM23-205ENST00000506400 GYPEP15421 78 aa7.83□□□□□ -1.16
TRIM23-205ENST00000506400 RAB4AP20338 218 aa7.83□□□□□ -1.16
TRIM23-205ENST00000506400 SUMO4Q6EEV6 95 aa7.83□□□□□ -1.16
TRIM23-205ENST00000506400 AMN1Q8IY45 258 aa7.83□□□□□ -1.16
TRIM23-205ENST00000506400 MRAP2Q96G30 205 aa7.83□□□□□ -1.16
TRIM23-205ENST00000506400 ICOSQ9Y6W8 199 aa7.83□□□□□ -1.16
TRIM23-205ENST00000506400 COL7A1Q02388 2944 aa7.82□□□□□ -1.16
TRIM23-205ENST00000506400 M0QY20 66 aa7.82□□□□□ -1.16
TRIM23-205ENST00000506400 RPL36AP83881 106 aaKnown RBP7.82□□□□□ -1.16
TRIM23-205ENST00000506400 MRPL23Q16540 153 aaKnown RBP7.82□□□□□ -1.16
TRIM23-205ENST00000506400 CASC10Q5T4H9 136 aa7.82□□□□□ -1.16
TRIM23-205ENST00000506400 SH2D6Q7Z4S9 175 aa7.82□□□□□ -1.16
TRIM23-205ENST00000506400 RPL36ALQ969Q0 106 aaKnown RBP7.82□□□□□ -1.16
TRIM23-205ENST00000506400 RNF185Q96GF1 192 aa7.82□□□□□ -1.16
TRIM23-205ENST00000506400 DNAJC30Q96LL9 226 aa7.82□□□□□ -1.16
TRIM23-205ENST00000506400 GNB1LQ9BYB4 327 aa7.82□□□□□ -1.16
TRIM23-205ENST00000506400 TGIF2-C20orf24A0A0A6YYL0 155 aa7.81□□□□□ -1.16
TRIM23-205ENST00000506400 NUDT3O95989 172 aa7.81□□□□□ -1.16
TRIM23-205ENST00000506400 PPP1R17O96001 155 aa7.81□□□□□ -1.16
TRIM23-205ENST00000506400 HLA-DQA1P01909 254 aa7.81□□□□□ -1.16
TRIM23-205ENST00000506400 TMEM136Q6ZRR5 245 aa7.81□□□□□ -1.16
TRIM23-205ENST00000506400 CBLN2Q8IUK8 224 aa7.81□□□□□ -1.16
TRIM23-205ENST00000506400 YPEL4Q96NS1 127 aa7.81□□□□□ -1.16
TRIM23-205ENST00000506400 NIT2Q9NQR4 276 aa7.81□□□□□ -1.16
TRIM23-205ENST00000506400 APLNQ9ULZ1 77 aa7.81□□□□□ -1.16
TRIM23-205ENST00000506400 TRBV7-3A0A075B6L6 115 aa7.8□□□□□ -1.16
TRIM23-205ENST00000506400 A0A096LPF7 62 aa7.8□□□□□ -1.16
TRIM23-205ENST00000506400 LOC100131303A0A0U1RQF7 123 aa7.8□□□□□ -1.16
TRIM23-205ENST00000506400 GAGE12JA6NER3 117 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms