RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 LINC00694P0DN24 101 aa12.17□□□□□ -0.46
SMN1-204ENST00000506163 FAM74A4Q5TZK3 123 aa12.17□□□□□ -0.46
SMN1-204ENST00000506163 LINC00336Q6ZUF6 198 aa12.17□□□□□ -0.46
SMN1-204ENST00000506163 NUDT10Q8NFP7 164 aa12.17□□□□□ -0.46
SMN1-204ENST00000506163 DAZAP1Q96EP5 407 aaKnown RBP12.17□□□□□ -0.46
SMN1-204ENST00000506163 NUDT11Q96G61 164 aa12.17□□□□□ -0.46
SMN1-204ENST00000506163 PKD1P98161 4303 aa12.16□□□□□ -0.46
SMN1-204ENST00000506163 PRSS29PA6NIE9 313 aa12.16□□□□□ -0.46
SMN1-204ENST00000506163 SSTP61278 116 aa12.16□□□□□ -0.46
SMN1-204ENST00000506163 WFDC10BQ8IUB3 73 aa12.16□□□□□ -0.46
SMN1-204ENST00000506163 SIVA1O15304 175 aa12.15□□□□□ -0.46
SMN1-204ENST00000506163 C6orf223Q8N319 242 aa12.15□□□□□ -0.46
SMN1-204ENST00000506163 EIF5A2Q9GZV4 153 aaKnown RBP12.15□□□□□ -0.46
SMN1-204ENST00000506163 RNASE7Q9H1E1 156 aaKnown RBP12.15□□□□□ -0.46
SMN1-204ENST00000506163 GAGE12JA6NER3 117 aa12.14□□□□□ -0.47
SMN1-204ENST00000506163 RHODO00212 210 aa12.14□□□□□ -0.47
SMN1-204ENST00000506163 P01737 135 aa12.14□□□□□ -0.47
SMN1-204ENST00000506163 SRP19P09132 144 aaKnown RBP12.14□□□□□ -0.47
SMN1-204ENST00000506163 TIRAPP58753 221 aa12.14□□□□□ -0.47
SMN1-204ENST00000506163 GAGE1Q13065 139 aa12.14□□□□□ -0.47
SMN1-204ENST00000506163 GAGE4Q13068 117 aa12.14□□□□□ -0.47
SMN1-204ENST00000506163 GAGE5Q13069 117 aa12.14□□□□□ -0.47
SMN1-204ENST00000506163 GAGE13Q4V321 117 aa12.14□□□□□ -0.47
SMN1-204ENST00000506163 SH2D6Q7Z4S9 175 aa12.14□□□□□ -0.47
SMN1-204ENST00000506163 KRTAP3-3Q9BYR6 98 aa12.14□□□□□ -0.47
SMN1-204ENST00000506163 KRTAP3-2Q9BYR7 98 aa12.14□□□□□ -0.47
SMN1-204ENST00000506163 MSRB1Q9NZV6 116 aa12.14□□□□□ -0.47
SMN1-204ENST00000506163 KIF25-AS1Q9Y6Z4 181 aa12.14□□□□□ -0.47
SMN1-204ENST00000506163 C9JQL5 133 aa12.13□□□□□ -0.47
SMN1-204ENST00000506163 CEBPGP53567 150 aa12.13□□□□□ -0.47
SMN1-204ENST00000506163 PKHD1P08F94 4074 aa12.12□□□□□ -0.47
SMN1-204ENST00000506163 DNAH11Q96DT5 4516 aa12.12□□□□□ -0.47
SMN1-204ENST00000506163 A0A1W2PPQ1 181 aa12.12□□□□□ -0.47
SMN1-204ENST00000506163 RPS20P60866 119 aaKnown RBP12.12□□□□□ -0.47
SMN1-204ENST00000506163 SRSF3P84103 164 aaKnown RBP12.12□□□□□ -0.47
SMN1-204ENST00000506163 SPANXN1Q5VSR9 72 aa12.12□□□□□ -0.47
SMN1-204ENST00000506163 FER1L6-AS1Q8NA97 138 aa12.12□□□□□ -0.47
SMN1-204ENST00000506163 ATP6V0E2Q8NHE4 81 aa12.12□□□□□ -0.47
SMN1-204ENST00000506163 BIN3Q9NQY0 253 aa12.12□□□□□ -0.47
SMN1-204ENST00000506163 TNFRSF18Q9Y5U5 241 aa12.12□□□□□ -0.47
SMN1-204ENST00000506163 NDUFS6O75380 124 aaKnown RBP12.11□□□□□ -0.47
SMN1-204ENST00000506163 LINC00315P59091 139 aa12.11□□□□□ -0.47
SMN1-204ENST00000506163 TNP2Q05952 138 aa12.11□□□□□ -0.47
SMN1-204ENST00000506163 TTC32Q5I0X7 151 aa12.11□□□□□ -0.47
SMN1-204ENST00000506163 TPPP3Q9BW30 176 aa12.11□□□□□ -0.47
SMN1-204ENST00000506163 SOHLH1Q5JUK2 328 aa12.11□□□□□ -0.47
SMN1-204ENST00000506163 LYZL1Q6UWQ5 148 aa12.11□□□□□ -0.47
SMN1-204ENST00000506163 GTSF1LQ9H1H1 148 aa12.11□□□□□ -0.47
SMN1-204ENST00000506163 DNAH10OSP0CZ25 163 aa12.1□□□□□ -0.47
SMN1-204ENST00000506163 RPP21Q9H633 154 aaKnown RBP12.1□□□□□ -0.47
SMN1-204ENST00000506163 RAB4BP61018 213 aa12.09□□□□□ -0.47
SMN1-204ENST00000506163 SMIM7Q9BQ49 75 aa12.09□□□□□ -0.47
SMN1-204ENST00000506163 LY96Q9Y6Y9 160 aa12.09□□□□□ -0.47
SMN1-204ENST00000506163 LELP1Q5T871 98 aa12.08□□□□□ -0.48
SMN1-204ENST00000506163 Q6ZRN7 208 aaPredicted RBP12.08□□□□□ -0.48
SMN1-204ENST00000506163 LINC01551Q86U37 167 aa12.08□□□□□ -0.48
SMN1-204ENST00000506163 GTSF1Q8WW33 167 aa12.08□□□□□ -0.48
SMN1-204ENST00000506163 XKRY2A2RUG3 117 aa12.07□□□□□ -0.48
SMN1-204ENST00000506163 ZNF727A8MUV8 499 aa12.07□□□□□ -0.48
SMN1-204ENST00000506163 CTRLP40313 264 aa12.07□□□□□ -0.48
SMN1-204ENST00000506163 FAM231DQ6ZW35 169 aa12.07□□□□□ -0.48
SMN1-204ENST00000506163 F2Z2F3 143 aa12.06□□□□□ -0.48
SMN1-204ENST00000506163 NTF3P20783 257 aa12.06□□□□□ -0.48
SMN1-204ENST00000506163 CACNG7P62955 275 aa12.06□□□□□ -0.48
SMN1-204ENST00000506163 ZNF56Q15929 161 aa12.06□□□□□ -0.48
SMN1-204ENST00000506163 Q8N3U1 123 aa12.06□□□□□ -0.48
SMN1-204ENST00000506163 NEXN-AS1Q8NBZ9 246 aa12.06□□□□□ -0.48
SMN1-204ENST00000506163 IGHV3-38A0A0C4DH36 116 aa12.05□□□□□ -0.48
SMN1-204ENST00000506163 TRBV10-1A0A0K0K1A3 114 aa12.05□□□□□ -0.48
SMN1-204ENST00000506163 EVI2AP22794 236 aa12.05□□□□□ -0.48
SMN1-204ENST00000506163 UBE2D3P61077 147 aa12.05□□□□□ -0.48
SMN1-204ENST00000506163 UBE2D2P62837 147 aa12.05□□□□□ -0.48
SMN1-204ENST00000506163 OR10J3Q5JRS4 329 aa12.05□□□□□ -0.48
SMN1-204ENST00000506163 OR10G8Q8NGN5 311 aa12.05□□□□□ -0.48
SMN1-204ENST00000506163 CNFNQ9BYD5 112 aa12.05□□□□□ -0.48
SMN1-204ENST00000506163 DYNC1H1Q14204 4646 aaKnown RBP12.05□□□□□ -0.48
SMN1-204ENST00000506163 F5H697 171 aa12.04□□□□□ -0.48
SMN1-204ENST00000506163 GATCO43716 136 aaKnown RBP12.04□□□□□ -0.48
SMN1-204ENST00000506163 LINC01556Q5JQF7 62 aa12.04□□□□□ -0.48
SMN1-204ENST00000506163 AP1S3Q96PC3 154 aa12.04□□□□□ -0.48
SMN1-204ENST00000506163 TRBV7-3A0A075B6L6 115 aa12.03□□□□□ -0.48
SMN1-204ENST00000506163 TRAV8-6A0A0B4J262 113 aa12.03□□□□□ -0.48
SMN1-204ENST00000506163 BTF3P20290 206 aaKnown RBP12.03□□□□□ -0.48
SMN1-204ENST00000506163 ERVFC1-1P60608 527 aa12.03□□□□□ -0.48
SMN1-204ENST00000506163 WDR73Q6P4I2 378 aa12.03□□□□□ -0.48
SMN1-204ENST00000506163 M0QY20 66 aa12.02□□□□□ -0.49
SMN1-204ENST00000506163 IGHV3-30P01768 117 aa12.02□□□□□ -0.49
SMN1-204ENST00000506163 IGHV3-33P01772 117 aa12.02□□□□□ -0.49
SMN1-204ENST00000506163 SMIM17P0DL12 118 aa12.02□□□□□ -0.49
SMN1-204ENST00000506163 IGHV3-30-3P0DP02 117 aa12.02□□□□□ -0.49
SMN1-204ENST00000506163 IGHV3-30-5P0DP03 117 aa12.02□□□□□ -0.49
SMN1-204ENST00000506163 RPL36AP83881 106 aaKnown RBP12.02□□□□□ -0.49
SMN1-204ENST00000506163 PEA15Q15121 130 aa12.02□□□□□ -0.49
SMN1-204ENST00000506163 RPL36ALQ969Q0 106 aaKnown RBP12.02□□□□□ -0.49
SMN1-204ENST00000506163 TRAV9-2A0A087WT02 112 aa12.01□□□□□ -0.49
SMN1-204ENST00000506163 K7EP13 123 aa12.01□□□□□ -0.49
SMN1-204ENST00000506163 MGPP08493 103 aa12.01□□□□□ -0.49
SMN1-204ENST00000506163 FOXA3P55318 350 aaPredicted RBP12.01□□□□□ -0.49
SMN1-204ENST00000506163 RPL23P62829 140 aaKnown RBP12.01□□□□□ -0.49
SMN1-204ENST00000506163 TMEM241Q24JQ0 296 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms