RNA–Protein interactions for RNA: ENST00000505944.5

NR1I3-221, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-221ENST00000505944 TMEM241Q24JQ0 296 aa4.8□□□□□ -1.64
NR1I3-221ENST00000505944 OR10AG1Q8NH19 301 aa4.8□□□□□ -1.64
NR1I3-221ENST00000505944 DAZAP1Q96EP5 407 aaKnown RBP4.8□□□□□ -1.64
NR1I3-221ENST00000505944 DNAH5Q8TE73 4624 aa4.79□□□□□ -1.64
NR1I3-221ENST00000505944 NACAE9PAV3 2078 aa4.79□□□□□ -1.64
NR1I3-221ENST00000505944 TRGV2A0A075B6R0 118 aa4.79□□□□□ -1.64
NR1I3-221ENST00000505944 A0A087WWL8 130 aa4.79□□□□□ -1.64
NR1I3-221ENST00000505944 A0A0J9YY99 117 aa4.79□□□□□ -1.64
NR1I3-221ENST00000505944 F8W036 122 aa4.79□□□□□ -1.64
NR1I3-221ENST00000505944 GATCO43716 136 aaKnown RBP4.79□□□□□ -1.64
NR1I3-221ENST00000505944 SPINK4O60575 86 aa4.79□□□□□ -1.64
NR1I3-221ENST00000505944 ERVFC1-1P60608 527 aa4.79□□□□□ -1.64
NR1I3-221ENST00000505944 TDRG1Q3Y452 100 aa4.79□□□□□ -1.64
NR1I3-221ENST00000505944 IBA57Q5T440 356 aaKnown RBP4.79□□□□□ -1.64
NR1I3-221ENST00000505944 ZNF493Q6ZR52 646 aa4.79□□□□□ -1.64
NR1I3-221ENST00000505944 COX8CQ7Z4L0 72 aa4.79□□□□□ -1.64
NR1I3-221ENST00000505944 ISOC2Q96AB3 205 aa4.79□□□□□ -1.64
NR1I3-221ENST00000505944 C9orf85Q96MD7 179 aa4.79□□□□□ -1.64
NR1I3-221ENST00000505944 LINC00467Q9BRT7 94 aa4.79□□□□□ -1.64
NR1I3-221ENST00000505944 SAMD10Q9BYL1 202 aa4.79□□□□□ -1.64
NR1I3-221ENST00000505944 KRTAP9-9Q9BYP9 154 aa4.79□□□□□ -1.64
NR1I3-221ENST00000505944 KRTAP9-4Q9BYQ2 154 aa4.79□□□□□ -1.64
NR1I3-221ENST00000505944 RPP21Q9H633 154 aaKnown RBP4.79□□□□□ -1.64
NR1I3-221ENST00000505944 SCRT2Q9NQ03 307 aa4.79□□□□□ -1.64
NR1I3-221ENST00000505944 MSRB1Q9NZV6 116 aa4.79□□□□□ -1.64
NR1I3-221ENST00000505944 NAT8Q9UHE5 227 aa4.79□□□□□ -1.64
NR1I3-221ENST00000505944 TMEM218A2RU14 115 aa4.78□□□□□ -1.64
NR1I3-221ENST00000505944 F5H768 121 aa4.78□□□□□ -1.64
NR1I3-221ENST00000505944 BTF3P20290 206 aaKnown RBP4.78□□□□□ -1.64
NR1I3-221ENST00000505944 HOXA5P20719 270 aa4.78□□□□□ -1.64
NR1I3-221ENST00000505944 ZNF876PQ49A33 203 aa4.78□□□□□ -1.64
NR1I3-221ENST00000505944 LYZL1Q6UWQ5 148 aa4.78□□□□□ -1.64
NR1I3-221ENST00000505944 Q6ZSN1 163 aa4.78□□□□□ -1.64
NR1I3-221ENST00000505944 C15orf53Q8NAA6 179 aa4.78□□□□□ -1.64
NR1I3-221ENST00000505944 GTSF1Q8WW33 167 aa4.78□□□□□ -1.64
NR1I3-221ENST00000505944 ZNF479Q96JC4 524 aa4.78□□□□□ -1.64
NR1I3-221ENST00000505944 KCNS1Q96KK3 526 aa4.78□□□□□ -1.64
NR1I3-221ENST00000505944 PGLYRP4Q96LB8 373 aa4.78□□□□□ -1.64
NR1I3-221ENST00000505944 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.78□□□□□ -1.64
NR1I3-221ENST00000505944 IGLV2-18A0A075B6J9 118 aa4.77□□□□□ -1.65
NR1I3-221ENST00000505944 A0A096LPF7 62 aa4.77□□□□□ -1.65
NR1I3-221ENST00000505944 LOC100131303A0A0U1RQF7 123 aa4.77□□□□□ -1.65
NR1I3-221ENST00000505944 M0R2P5 195 aa4.77□□□□□ -1.65
NR1I3-221ENST00000505944 FOXA3P55318 350 aaPredicted RBP4.77□□□□□ -1.65
NR1I3-221ENST00000505944 FAM74A3Q4VXF1 159 aa4.77□□□□□ -1.65
NR1I3-221ENST00000505944 FAM74A4Q5TZK3 123 aa4.77□□□□□ -1.65
NR1I3-221ENST00000505944 TMEM88Q6PEY1 159 aa4.77□□□□□ -1.65
NR1I3-221ENST00000505944 C6orf223Q8N319 242 aa4.77□□□□□ -1.65
NR1I3-221ENST00000505944 FER1L6-AS1Q8NA97 138 aa4.77□□□□□ -1.65
NR1I3-221ENST00000505944 OR10G8Q8NGN5 311 aa4.77□□□□□ -1.65
NR1I3-221ENST00000505944 SFRP2Q96HF1 295 aa4.77□□□□□ -1.65
NR1I3-221ENST00000505944 Q9UF83 564 aa4.77□□□□□ -1.65
NR1I3-221ENST00000505944 PHLDA3Q9Y5J5 127 aa4.77□□□□□ -1.65
NR1I3-221ENST00000505944 V9GYV3 84 aa4.77□□□□□ -1.65
NR1I3-221ENST00000505944 LYRM9A8MSI8 78 aa4.76□□□□□ -1.65
NR1I3-221ENST00000505944 EPM2AB3EWF7 344 aa4.76□□□□□ -1.65
NR1I3-221ENST00000505944 IGLC6P0CF74 106 aa4.76□□□□□ -1.65
NR1I3-221ENST00000505944 DAZ2Q13117 558 aaKnown RBP4.76□□□□□ -1.65
NR1I3-221ENST00000505944 SPANXN1Q5VSR9 72 aa4.76□□□□□ -1.65
NR1I3-221ENST00000505944 CFAP126Q5VTH2 177 aa4.76□□□□□ -1.65
NR1I3-221ENST00000505944 UQCC3Q6UW78 93 aa4.76□□□□□ -1.65
NR1I3-221ENST00000505944 LINC00612Q8N6U2 182 aa4.76□□□□□ -1.65
NR1I3-221ENST00000505944 CLRN3Q8NCR9 226 aa4.76□□□□□ -1.65
NR1I3-221ENST00000505944 SMIM12Q96EX1 92 aa4.76□□□□□ -1.65
NR1I3-221ENST00000505944 LY96Q9Y6Y9 160 aa4.76□□□□□ -1.65
NR1I3-221ENST00000505944 TRAV26-1A0A087WT03 109 aa4.75□□□□□ -1.65
NR1I3-221ENST00000505944 HIGD1CA8MV81 97 aa4.75□□□□□ -1.65
NR1I3-221ENST00000505944 NUDT3O95989 172 aa4.75□□□□□ -1.65
NR1I3-221ENST00000505944 APOC3P02656 99 aa4.75□□□□□ -1.65
NR1I3-221ENST00000505944 MGPP08493 103 aa4.75□□□□□ -1.65
NR1I3-221ENST00000505944 MRPL54Q6P161 138 aaKnown RBP4.75□□□□□ -1.65
NR1I3-221ENST00000505944 ATRAIDQ6UW56 229 aa4.75□□□□□ -1.65
NR1I3-221ENST00000505944 C14orf178Q8N769 122 aaPredicted RBP4.75□□□□□ -1.65
NR1I3-221ENST00000505944 C15orf54Q8N8G6 183 aa4.75□□□□□ -1.65
NR1I3-221ENST00000505944 OR4C5Q8NGB2 326 aa4.75□□□□□ -1.65
NR1I3-221ENST00000505944 DEFB104AQ8WTQ1 72 aa4.75□□□□□ -1.65
NR1I3-221ENST00000505944 SPXQ9BT56 116 aa4.75□□□□□ -1.65
NR1I3-221ENST00000505944 SMDT1Q9H4I9 107 aa4.75□□□□□ -1.65
NR1I3-221ENST00000505944 BIN3Q9NQY0 253 aa4.75□□□□□ -1.65
NR1I3-221ENST00000505944 OSTCQ9NRP0 149 aa4.75□□□□□ -1.65
NR1I3-221ENST00000505944 IL36BQ9NZH7 164 aa4.75□□□□□ -1.65
NR1I3-221ENST00000505944 TRAV26-2A0A0B4J265 109 aa4.74□□□□□ -1.65
NR1I3-221ENST00000505944 TRAV4A0A0B4J268 109 aa4.74□□□□□ -1.65
NR1I3-221ENST00000505944 TRGV4A0A0C4DH28 118 aa4.74□□□□□ -1.65
NR1I3-221ENST00000505944 NBDYA0A0U1RRE5 68 aa4.74□□□□□ -1.65
NR1I3-221ENST00000505944 RS1O15537 224 aa4.74□□□□□ -1.65
NR1I3-221ENST00000505944 SNAI2O43623 268 aa4.74□□□□□ -1.65
NR1I3-221ENST00000505944 NDUFS6O75380 124 aaKnown RBP4.74□□□□□ -1.65
NR1I3-221ENST00000505944 ATP5G1P05496 136 aa4.74□□□□□ -1.65
NR1I3-221ENST00000505944 EVI2AP22794 236 aa4.74□□□□□ -1.65
NR1I3-221ENST00000505944 CTRLP40313 264 aa4.74□□□□□ -1.65
NR1I3-221ENST00000505944 RPS20P60866 119 aaKnown RBP4.74□□□□□ -1.65
NR1I3-221ENST00000505944 FHL2Q14192 279 aa4.74□□□□□ -1.65
NR1I3-221ENST00000505944 TWIST1Q15672 202 aa4.74□□□□□ -1.65
NR1I3-221ENST00000505944 TTC32Q5I0X7 151 aa4.74□□□□□ -1.65
NR1I3-221ENST00000505944 FAM231DQ6ZW35 169 aa4.74□□□□□ -1.65
NR1I3-221ENST00000505944 ZFP82Q8N141 532 aa4.74□□□□□ -1.65
NR1I3-221ENST00000505944 NUP35Q8NFH5 326 aa4.74□□□□□ -1.65
NR1I3-221ENST00000505944 TSKUQ8WUA8 353 aa4.74□□□□□ -1.65
NR1I3-221ENST00000505944 RASL10AQ92737 203 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms