RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 SPANXN1Q5VSR9 72 aa13.95□□□□□ -0.18
HERC6-205ENST00000504905 ZNRF2Q8NHG8 242 aa13.95□□□□□ -0.18
HERC6-205ENST00000504905 TPPP3Q9BW30 176 aa13.95□□□□□ -0.18
HERC6-205ENST00000504905 RNASE7Q9H1E1 156 aaKnown RBP13.95□□□□□ -0.18
HERC6-205ENST00000504905 LY96Q9Y6Y9 160 aa13.95□□□□□ -0.18
HERC6-205ENST00000504905 DNAH6Q9C0G6 4158 aa13.95□□□□□ -0.18
HERC6-205ENST00000504905 A0A087WWL8 130 aa13.94□□□□□ -0.18
HERC6-205ENST00000504905 MUC21A0A0G2JKD1 596 aa13.94□□□□□ -0.18
HERC6-205ENST00000504905 MUC21A0A140T8X8 626 aa13.94□□□□□ -0.18
HERC6-205ENST00000504905 UFSP1Q6NVU6 142 aa13.94□□□□□ -0.18
HERC6-205ENST00000504905 FER1L6-AS1Q8NA97 138 aa13.94□□□□□ -0.18
HERC6-205ENST00000504905 MRPS16Q9Y3D3 137 aaKnown RBP13.94□□□□□ -0.18
HERC6-205ENST00000504905 IGLC6P0CF74 106 aa13.93□□□□□ -0.18
HERC6-205ENST00000504905 SSTP61278 116 aa13.93□□□□□ -0.18
HERC6-205ENST00000504905 SH2D6Q7Z4S9 175 aa13.93□□□□□ -0.18
HERC6-205ENST00000504905 RPP21Q9H633 154 aaKnown RBP13.93□□□□□ -0.18
HERC6-205ENST00000504905 SRSF3P84103 164 aaKnown RBP13.92□□□□□ -0.18
HERC6-205ENST00000504905 LYPD5Q6UWN5 251 aa13.92□□□□□ -0.18
HERC6-205ENST00000504905 Q6ZSN1 163 aa13.92□□□□□ -0.18
HERC6-205ENST00000504905 UPK3BQ9BT76 320 aa13.92□□□□□ -0.18
HERC6-205ENST00000504905 SMDT1Q9H4I9 107 aa13.92□□□□□ -0.18
HERC6-205ENST00000504905 CRYGDP07320 174 aa13.91□□□□□ -0.18
HERC6-205ENST00000504905 Q9H8V8 135 aa13.91□□□□□ -0.18
HERC6-205ENST00000504905 A0A1W2PPQ1 181 aa13.9□□□□□ -0.18
HERC6-205ENST00000504905 C9JQL5 133 aa13.9□□□□□ -0.18
HERC6-205ENST00000504905 F2Z2F3 143 aa13.9□□□□□ -0.18
HERC6-205ENST00000504905 GATCO43716 136 aaKnown RBP13.9□□□□□ -0.18
HERC6-205ENST00000504905 ERVFC1-1P60608 527 aa13.9□□□□□ -0.18
HERC6-205ENST00000504905 FAM74A3Q4VXF1 159 aa13.9□□□□□ -0.18
HERC6-205ENST00000504905 FAM231DQ6ZW35 169 aa13.9□□□□□ -0.18
HERC6-205ENST00000504905 LINC01551Q86U37 167 aa13.9□□□□□ -0.18
HERC6-205ENST00000504905 CACNG7P62955 275 aa13.89□□□□□ -0.19
HERC6-205ENST00000504905 Q6ZR54 194 aa13.89□□□□□ -0.19
HERC6-205ENST00000504905 C14orf178Q8N769 122 aaPredicted RBP13.89□□□□□ -0.19
HERC6-205ENST00000504905 TMEM241Q24JQ0 296 aa13.88□□□□□ -0.19
HERC6-205ENST00000504905 LYZL1Q6UWQ5 148 aa13.88□□□□□ -0.19
HERC6-205ENST00000504905 AP1S3Q96PC3 154 aa13.88□□□□□ -0.19
HERC6-205ENST00000504905 NBDYA0A0U1RRE5 68 aa13.87□□□□□ -0.19
HERC6-205ENST00000504905 SMIM17P0DL12 118 aa13.87□□□□□ -0.19
HERC6-205ENST00000504905 ZNF56Q15929 161 aa13.87□□□□□ -0.19
HERC6-205ENST00000504905 GAGE12JA6NER3 117 aa13.86□□□□□ -0.19
HERC6-205ENST00000504905 CTRLP40313 264 aa13.86□□□□□ -0.19
HERC6-205ENST00000504905 GAGE1Q13065 139 aa13.86□□□□□ -0.19
HERC6-205ENST00000504905 GAGE4Q13068 117 aa13.86□□□□□ -0.19
HERC6-205ENST00000504905 GAGE5Q13069 117 aa13.86□□□□□ -0.19
HERC6-205ENST00000504905 GAGE13Q4V321 117 aa13.86□□□□□ -0.19
HERC6-205ENST00000504905 A8MWL6 223 aa13.85□□□□□ -0.19
HERC6-205ENST00000504905 SIVA1O15304 175 aa13.85□□□□□ -0.19
HERC6-205ENST00000504905 RAB4BP61018 213 aa13.85□□□□□ -0.19
HERC6-205ENST00000504905 SOHLH1Q5JUK2 328 aa13.85□□□□□ -0.19
HERC6-205ENST00000504905 ATP6V0E2Q8NHE4 81 aa13.85□□□□□ -0.19
HERC6-205ENST00000504905 NAT8Q9UHE5 227 aa13.85□□□□□ -0.19
HERC6-205ENST00000504905 TIRAPP58753 221 aa13.84□□□□□ -0.19
HERC6-205ENST00000504905 CT83Q5H943 113 aa13.84□□□□□ -0.19
HERC6-205ENST00000504905 TTC32Q5I0X7 151 aa13.84□□□□□ -0.19
HERC6-205ENST00000504905 WDR73Q6P4I2 378 aa13.84□□□□□ -0.19
HERC6-205ENST00000504905 OSTCQ9NRP0 149 aa13.84□□□□□ -0.19
HERC6-205ENST00000504905 MSRB1Q9NZV6 116 aa13.84□□□□□ -0.19
HERC6-205ENST00000504905 FAT2Q9NYQ8 4349 aa13.83□□□□□ -0.19
HERC6-205ENST00000504905 F5H697 171 aa13.83□□□□□ -0.2
HERC6-205ENST00000504905 TRGC1P0CF51 173 aa13.83□□□□□ -0.2
HERC6-205ENST00000504905 NTF3P20783 257 aa13.83□□□□□ -0.2
HERC6-205ENST00000504905 RPL23P62829 140 aaKnown RBP13.83□□□□□ -0.2
HERC6-205ENST00000504905 ADIRFQ15847 76 aa13.83□□□□□ -0.2
HERC6-205ENST00000504905 LINC00336Q6ZUF6 198 aa13.83□□□□□ -0.2
HERC6-205ENST00000504905 C15orf54Q8N8G6 183 aa13.83□□□□□ -0.2
HERC6-205ENST00000504905 GTSF1Q8WW33 167 aa13.83□□□□□ -0.2
HERC6-205ENST00000504905 GTSF1LQ9H1H1 148 aa13.83□□□□□ -0.2
HERC6-205ENST00000504905 Q9UF83 564 aa13.83□□□□□ -0.2
HERC6-205ENST00000504905 PKHD1P08F94 4074 aa13.82□□□□□ -0.2
HERC6-205ENST00000504905 TRBV10-1A0A0K0K1A3 114 aa13.82□□□□□ -0.2
HERC6-205ENST00000504905 LINC00694P0DN24 101 aa13.82□□□□□ -0.2
HERC6-205ENST00000504905 ISOC2Q96AB3 205 aa13.82□□□□□ -0.2
HERC6-205ENST00000504905 CNFNQ9BYD5 112 aa13.82□□□□□ -0.2
HERC6-205ENST00000504905 KIF25-AS1Q9Y6Z4 181 aa13.82□□□□□ -0.2
HERC6-205ENST00000504905 LINC00862A6NCI5 91 aa13.81□□□□□ -0.2
HERC6-205ENST00000504905 MGPP08493 103 aa13.81□□□□□ -0.2
HERC6-205ENST00000504905 TWIST1Q15672 202 aa13.81□□□□□ -0.2
HERC6-205ENST00000504905 C1orf134Q5TEV5 83 aa13.81□□□□□ -0.2
HERC6-205ENST00000504905 DNAH2Q9P225 4427 aa13.8□□□□□ -0.2
HERC6-205ENST00000504905 RPL36AP83881 106 aaKnown RBP13.8□□□□□ -0.2
HERC6-205ENST00000504905 WFDC10BQ8IUB3 73 aa13.8□□□□□ -0.2
HERC6-205ENST00000504905 TSKUQ8WUA8 353 aa13.8□□□□□ -0.2
HERC6-205ENST00000504905 RPL36ALQ969Q0 106 aaKnown RBP13.8□□□□□ -0.2
HERC6-205ENST00000504905 PGLYRP4Q96LB8 373 aa13.8□□□□□ -0.2
HERC6-205ENST00000504905 DNAH17Q9UFH2 4485 aa13.8□□□□□ -0.2
HERC6-205ENST00000504905 TRAV8-6A0A0B4J262 113 aa13.79□□□□□ -0.2
HERC6-205ENST00000504905 A0A1B0GVY2 172 aa13.79□□□□□ -0.2
HERC6-205ENST00000504905 EVI2AP22794 236 aa13.79□□□□□ -0.2
HERC6-205ENST00000504905 OR10J3Q5JRS4 329 aa13.79□□□□□ -0.2
HERC6-205ENST00000504905 UQCC3Q6UW78 93 aa13.79□□□□□ -0.2
HERC6-205ENST00000504905 GFRA4Q9GZZ7 299 aa13.79□□□□□ -0.2
HERC6-205ENST00000504905 TRBV7-3A0A075B6L6 115 aa13.78□□□□□ -0.2
HERC6-205ENST00000504905 LINC00315P59091 139 aa13.78□□□□□ -0.2
HERC6-205ENST00000504905 LELP1Q5T871 98 aa13.78□□□□□ -0.2
HERC6-205ENST00000504905 COMMD7Q86VX2 200 aa13.78□□□□□ -0.2
HERC6-205ENST00000504905 OR10G8Q8NGN5 311 aa13.78□□□□□ -0.2
HERC6-205ENST00000504905 BORCS7Q96B45 105 aa13.78□□□□□ -0.2
HERC6-205ENST00000504905 KRTAP1-5Q9BYS1 174 aa13.78□□□□□ -0.2
HERC6-205ENST00000504905 DPH3P1Q9H4G8 78 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms