RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 CACNG7P62955 275 aa8.31□□□□□ -1.08
PDLIM5-208ENST00000504489 SPANXN1Q5VSR9 72 aa8.31□□□□□ -1.08
PDLIM5-208ENST00000504489 UFSP1Q6NVU6 142 aa8.31□□□□□ -1.08
PDLIM5-208ENST00000504489 LYZL1Q6UWQ5 148 aa8.31□□□□□ -1.08
PDLIM5-208ENST00000504489 COMMD7Q86VX2 200 aa8.31□□□□□ -1.08
PDLIM5-208ENST00000504489 PLECQ15149 4684 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-208ENST00000504489 A0A0J9YY99 117 aa8.3□□□□□ -1.08
PDLIM5-208ENST00000504489 TMEM218A2RU14 115 aa8.3□□□□□ -1.08
PDLIM5-208ENST00000504489 FAM231BA6NCW3 169 aa8.3□□□□□ -1.08
PDLIM5-208ENST00000504489 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.3□□□□□ -1.08
PDLIM5-208ENST00000504489 RHODO00212 210 aa8.3□□□□□ -1.08
PDLIM5-208ENST00000504489 CRYGDP07320 174 aa8.3□□□□□ -1.08
PDLIM5-208ENST00000504489 FOXA3P55318 350 aaPredicted RBP8.3□□□□□ -1.08
PDLIM5-208ENST00000504489 PNRC1Q12796 327 aaPredicted RBP8.3□□□□□ -1.08
PDLIM5-208ENST00000504489 LGALS9CQ6DKI2 356 aa8.3□□□□□ -1.08
PDLIM5-208ENST00000504489 OR10G8Q8NGN5 311 aa8.3□□□□□ -1.08
PDLIM5-208ENST00000504489 GTSF1Q8WW33 167 aa8.3□□□□□ -1.08
PDLIM5-208ENST00000504489 TPPP3Q9BW30 176 aa8.3□□□□□ -1.08
PDLIM5-208ENST00000504489 CNFNQ9BYD5 112 aa8.3□□□□□ -1.08
PDLIM5-208ENST00000504489 SAMD10Q9BYL1 202 aa8.3□□□□□ -1.08
PDLIM5-208ENST00000504489 GFRA4Q9GZZ7 299 aa8.3□□□□□ -1.08
PDLIM5-208ENST00000504489 V9GYV3 84 aa8.3□□□□□ -1.08
PDLIM5-208ENST00000504489 MUC21A0A0G2JKD1 596 aa8.29□□□□□ -1.08
PDLIM5-208ENST00000504489 MUC21A0A140T8X8 626 aa8.29□□□□□ -1.08
PDLIM5-208ENST00000504489 LCE6AA0A183 80 aa8.29□□□□□ -1.08
PDLIM5-208ENST00000504489 TRBV6-4A0A1B0GX49 114 aa8.29□□□□□ -1.08
PDLIM5-208ENST00000504489 TSKUQ8WUA8 353 aa8.29□□□□□ -1.08
PDLIM5-208ENST00000504489 LINC00476Q8WZB0 136 aa8.29□□□□□ -1.08
PDLIM5-208ENST00000504489 A0A096LPF7 62 aa8.28□□□□□ -1.08
PDLIM5-208ENST00000504489 IGHV3-73A0A0B4J1V6 119 aa8.28□□□□□ -1.08
PDLIM5-208ENST00000504489 TMEM238LA0A1B0GVL6 79 aa8.28□□□□□ -1.08
PDLIM5-208ENST00000504489 NUDT3O95989 172 aa8.28□□□□□ -1.08
PDLIM5-208ENST00000504489 P0DMU3 169 aa8.28□□□□□ -1.08
PDLIM5-208ENST00000504489 FAM231AP0DMU4 169 aa8.28□□□□□ -1.08
PDLIM5-208ENST00000504489 FAM231CP0DMU5 169 aa8.28□□□□□ -1.08
PDLIM5-208ENST00000504489 NTF3P20783 257 aa8.28□□□□□ -1.08
PDLIM5-208ENST00000504489 SLC25A29Q8N8R3 303 aa8.28□□□□□ -1.08
PDLIM5-208ENST00000504489 AP1S3Q96PC3 154 aa8.28□□□□□ -1.08
PDLIM5-208ENST00000504489 DNAH1Q9P2D7 4330 aa8.28□□□□□ -1.08
PDLIM5-208ENST00000504489 A0A087WWL8 130 aa8.27□□□□□ -1.09
PDLIM5-208ENST00000504489 KRTAP9-6A0A140TA67 174 aa8.27□□□□□ -1.09
PDLIM5-208ENST00000504489 ADCYAP1P18509 176 aa8.27□□□□□ -1.09
PDLIM5-208ENST00000504489 SSTP61278 116 aa8.27□□□□□ -1.09
PDLIM5-208ENST00000504489 RHOHQ15669 191 aa8.27□□□□□ -1.09
PDLIM5-208ENST00000504489 MRPL23Q16540 153 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-208ENST00000504489 FAM74A4Q5TZK3 123 aa8.27□□□□□ -1.09
PDLIM5-208ENST00000504489 Q6ZSN1 163 aa8.27□□□□□ -1.09
PDLIM5-208ENST00000504489 PRADC1Q9BSG0 188 aa8.27□□□□□ -1.09
PDLIM5-208ENST00000504489 SEC11CQ9BY50 192 aa8.27□□□□□ -1.09
PDLIM5-208ENST00000504489 MSRB1Q9NZV6 116 aa8.27□□□□□ -1.09
PDLIM5-208ENST00000504489 ICOSQ9Y6W8 199 aa8.27□□□□□ -1.09
PDLIM5-208ENST00000504489 KIF25-AS1Q9Y6Z4 181 aa8.27□□□□□ -1.09
PDLIM5-208ENST00000504489 ALMS1Q8TCU4 4167 aa8.27□□□□□ -1.09
PDLIM5-208ENST00000504489 LYSTQ99698 3801 aa8.26□□□□□ -1.09
PDLIM5-208ENST00000504489 HIGD1CA8MV81 97 aa8.26□□□□□ -1.09
PDLIM5-208ENST00000504489 F8W036 122 aa8.26□□□□□ -1.09
PDLIM5-208ENST00000504489 K7EQD1 137 aa8.26□□□□□ -1.09
PDLIM5-208ENST00000504489 PPP1R2P9O14990 202 aa8.26□□□□□ -1.09
PDLIM5-208ENST00000504489 TRGC1P0CF51 173 aa8.26□□□□□ -1.09
PDLIM5-208ENST00000504489 SMIM17P0DL12 118 aa8.26□□□□□ -1.09
PDLIM5-208ENST00000504489 GYPEP15421 78 aa8.26□□□□□ -1.09
PDLIM5-208ENST00000504489 RAB4BP61018 213 aa8.26□□□□□ -1.09
PDLIM5-208ENST00000504489 RNF212Q495C1 297 aa8.26□□□□□ -1.09
PDLIM5-208ENST00000504489 C14orf178Q8N769 122 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-208ENST00000504489 PGLYRP4Q96LB8 373 aa8.26□□□□□ -1.09
PDLIM5-208ENST00000504489 VPS13DQ5THJ4 4388 aa8.25□□□□□ -1.09
PDLIM5-208ENST00000504489 SMIM27A0A1W2PRY6 76 aa8.25□□□□□ -1.09
PDLIM5-208ENST00000504489 LY6G6CO95867 125 aa8.25□□□□□ -1.09
PDLIM5-208ENST00000504489 LINC00315P59091 139 aa8.25□□□□□ -1.09
PDLIM5-208ENST00000504489 TWIST1Q15672 202 aa8.25□□□□□ -1.09
PDLIM5-208ENST00000504489 SH2D6Q7Z4S9 175 aa8.25□□□□□ -1.09
PDLIM5-208ENST00000504489 ANAPC16Q96DE5 110 aa8.25□□□□□ -1.09
PDLIM5-208ENST00000504489 LOC100131303A0A0U1RQF7 123 aa8.24□□□□□ -1.09
PDLIM5-208ENST00000504489 A0A1B0GUT8 65 aa8.24□□□□□ -1.09
PDLIM5-208ENST00000504489 MT-ND4LP03901 98 aa8.24□□□□□ -1.09
PDLIM5-208ENST00000504489 EVI2AP22794 236 aa8.24□□□□□ -1.09
PDLIM5-208ENST00000504489 SRIP30626 198 aa8.24□□□□□ -1.09
PDLIM5-208ENST00000504489 CCL18P55774 89 aa8.24□□□□□ -1.09
PDLIM5-208ENST00000504489 FAM3BP58499 235 aaPredicted RBP8.24□□□□□ -1.09
PDLIM5-208ENST00000504489 C10orf91Q5T1B1 145 aa8.24□□□□□ -1.09
PDLIM5-208ENST00000504489 NEGR1Q7Z3B1 354 aa8.24□□□□□ -1.09
PDLIM5-208ENST00000504489 NUP35Q8NFH5 326 aa8.24□□□□□ -1.09
PDLIM5-208ENST00000504489 BORCS7Q96B45 105 aa8.24□□□□□ -1.09
PDLIM5-208ENST00000504489 NAT8BQ9UHF3 227 aa8.24□□□□□ -1.09
PDLIM5-208ENST00000504489 TRBV10-1A0A0K0K1A3 114 aa8.23□□□□□ -1.09
PDLIM5-208ENST00000504489 ZNF56Q15929 161 aa8.23□□□□□ -1.09
PDLIM5-208ENST00000504489 ESRGQ1W209 222 aa8.23□□□□□ -1.09
PDLIM5-208ENST00000504489 DPH3P1Q9H4G8 78 aa8.23□□□□□ -1.09
PDLIM5-208ENST00000504489 CARHSP1Q9Y2V2 147 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-208ENST00000504489 SACSQ9NZJ4 4579 aa8.22□□□□□ -1.09
PDLIM5-208ENST00000504489 F5H697 171 aa8.22□□□□□ -1.09
PDLIM5-208ENST00000504489 RIGQ13278 110 aa8.22□□□□□ -1.09
PDLIM5-208ENST00000504489 SMIM15Q7Z3B0 74 aa8.22□□□□□ -1.09
PDLIM5-208ENST00000504489 UBE2DNLQ8IWF7 75 aa8.22□□□□□ -1.09
PDLIM5-208ENST00000504489 Q9UF83 564 aa8.22□□□□□ -1.09
PDLIM5-208ENST00000504489 LINC00588Q9Y4M8 146 aa8.22□□□□□ -1.09
PDLIM5-208ENST00000504489 KMT2CQ8NEZ4 4911 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-208ENST00000504489 LINC00694P0DN24 101 aa8.21□□□□□ -1.1
PDLIM5-208ENST00000504489 TIRAPP58753 221 aa8.21□□□□□ -1.1
PDLIM5-208ENST00000504489 LYPD5Q6UWN5 251 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms