RNA–Protein interactions for RNA: ENST00000504461.5

PDGFRA-204, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 4

Gene PDGFRA, Length 771 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-204ENST00000504461 SFRP2Q96HF1 295 aa8.6□□□□□ -1.03
PDGFRA-204ENST00000504461 RNASE7Q9H1E1 156 aaKnown RBP8.6□□□□□ -1.03
PDGFRA-204ENST00000504461 PRO0255Q9UI72 69 aa8.6□□□□□ -1.03
PDGFRA-204ENST00000504461 HHLA3Q9XRX5 114 aa8.6□□□□□ -1.03
PDGFRA-204ENST00000504461 MUC4Q99102 2169 aa8.6□□□□□ -1.03
PDGFRA-204ENST00000504461 DNAH17Q9UFH2 4485 aa8.6□□□□□ -1.03
PDGFRA-204ENST00000504461 TRGV4A0A0C4DH28 118 aa8.59□□□□□ -1.03
PDGFRA-204ENST00000504461 TMEM218A2RU14 115 aa8.59□□□□□ -1.03
PDGFRA-204ENST00000504461 RHODO00212 210 aa8.59□□□□□ -1.03
PDGFRA-204ENST00000504461 PPP1R2P9O14990 202 aa8.59□□□□□ -1.03
PDGFRA-204ENST00000504461 RS1O15537 224 aa8.59□□□□□ -1.03
PDGFRA-204ENST00000504461 IGLC6P0CF74 106 aa8.59□□□□□ -1.03
PDGFRA-204ENST00000504461 RPL23P62829 140 aaKnown RBP8.59□□□□□ -1.03
PDGFRA-204ENST00000504461 RPL19P84098 196 aaKnown RBP8.59□□□□□ -1.03
PDGFRA-204ENST00000504461 SPANXN1Q5VSR9 72 aa8.59□□□□□ -1.03
PDGFRA-204ENST00000504461 CFAP126Q5VTH2 177 aa8.59□□□□□ -1.03
PDGFRA-204ENST00000504461 DMRTA1Q5VZB9 504 aa8.59□□□□□ -1.03
PDGFRA-204ENST00000504461 ISOC2Q96AB3 205 aa8.59□□□□□ -1.03
PDGFRA-204ENST00000504461 DNAH2Q9P225 4427 aa8.58□□□□□ -1.04
PDGFRA-204ENST00000504461 PAX4O43316 350 aa8.58□□□□□ -1.04
PDGFRA-204ENST00000504461 NXPH4O95158 308 aa8.58□□□□□ -1.04
PDGFRA-204ENST00000504461 FHL2Q14192 279 aa8.58□□□□□ -1.04
PDGFRA-204ENST00000504461 ADIRFQ15847 76 aa8.58□□□□□ -1.04
PDGFRA-204ENST00000504461 SH2D6Q7Z4S9 175 aa8.58□□□□□ -1.04
PDGFRA-204ENST00000504461 COMMD7Q86VX2 200 aa8.58□□□□□ -1.04
PDGFRA-204ENST00000504461 OR10G8Q8NGN5 311 aa8.58□□□□□ -1.04
PDGFRA-204ENST00000504461 TSKUQ8WUA8 353 aa8.58□□□□□ -1.04
PDGFRA-204ENST00000504461 BORCS7Q96B45 105 aa8.58□□□□□ -1.04
PDGFRA-204ENST00000504461 VSIG2Q96IQ7 327 aa8.58□□□□□ -1.04
PDGFRA-204ENST00000504461 UPK3BQ9BT76 320 aa8.58□□□□□ -1.04
PDGFRA-204ENST00000504461 MRPS16Q9Y3D3 137 aaKnown RBP8.58□□□□□ -1.04
PDGFRA-204ENST00000504461 PKD1P98161 4303 aa8.57□□□□□ -1.04
PDGFRA-204ENST00000504461 A0A096LPF7 62 aa8.57□□□□□ -1.04
PDGFRA-204ENST00000504461 TRBV6-4A0A1B0GX49 114 aa8.57□□□□□ -1.04
PDGFRA-204ENST00000504461 C16orf90A8MZG2 172 aa8.57□□□□□ -1.04
PDGFRA-204ENST00000504461 M0R381 172 aa8.57□□□□□ -1.04
PDGFRA-204ENST00000504461 IGHV3-53P01767 116 aa8.57□□□□□ -1.04
PDGFRA-204ENST00000504461 MT-ND4LP03901 98 aa8.57□□□□□ -1.04
PDGFRA-204ENST00000504461 SMIM17P0DL12 118 aa8.57□□□□□ -1.04
PDGFRA-204ENST00000504461 TPPP3Q9BW30 176 aa8.57□□□□□ -1.04
PDGFRA-204ENST00000504461 SEC11CQ9BY50 192 aa8.57□□□□□ -1.04
PDGFRA-204ENST00000504461 CNFNQ9BYD5 112 aa8.57□□□□□ -1.04
PDGFRA-204ENST00000504461 ICOSQ9Y6W8 199 aa8.57□□□□□ -1.04
PDGFRA-204ENST00000504461 FAT2Q9NYQ8 4349 aa8.56□□□□□ -1.04
PDGFRA-204ENST00000504461 F8W036 122 aa8.56□□□□□ -1.04
PDGFRA-204ENST00000504461 SMIM15Q7Z3B0 74 aa8.56□□□□□ -1.04
PDGFRA-204ENST00000504461 ANAPC16Q96DE5 110 aa8.56□□□□□ -1.04
PDGFRA-204ENST00000504461 ZNF479Q96JC4 524 aa8.56□□□□□ -1.04
PDGFRA-204ENST00000504461 PRADC1Q9BSG0 188 aa8.56□□□□□ -1.04
PDGFRA-204ENST00000504461 TRGC1P0CF51 173 aa8.55□□□□□ -1.04
PDGFRA-204ENST00000504461 CTRLP40313 264 aa8.55□□□□□ -1.04
PDGFRA-204ENST00000504461 CRYBA4P53673 196 aa8.55□□□□□ -1.04
PDGFRA-204ENST00000504461 MRPL23Q16540 153 aaKnown RBP8.55□□□□□ -1.04
PDGFRA-204ENST00000504461 LYZL1Q6UWQ5 148 aa8.55□□□□□ -1.04
PDGFRA-204ENST00000504461 OR10AG1Q8NH19 301 aa8.55□□□□□ -1.04
PDGFRA-204ENST00000504461 NAT8BQ9UHF3 227 aa8.55□□□□□ -1.04
PDGFRA-204ENST00000504461 SIVA1O15304 175 aa8.54□□□□□ -1.04
PDGFRA-204ENST00000504461 GZMBP10144 247 aa8.54□□□□□ -1.04
PDGFRA-204ENST00000504461 GATA1P15976 413 aaPredicted RBP8.54□□□□□ -1.04
PDGFRA-204ENST00000504461 NTF3P20783 257 aa8.54□□□□□ -1.04
PDGFRA-204ENST00000504461 RAB4BP61018 213 aa8.54□□□□□ -1.04
PDGFRA-204ENST00000504461 TWIST1Q15672 202 aa8.54□□□□□ -1.04
PDGFRA-204ENST00000504461 AP1S3Q96PC3 154 aa8.54□□□□□ -1.04
PDGFRA-204ENST00000504461 KRTAP1-5Q9BYS1 174 aa8.54□□□□□ -1.04
PDGFRA-204ENST00000504461 V9GYV3 84 aa8.54□□□□□ -1.04
PDGFRA-204ENST00000504461 KIAA1109Q2LD37 5005 aa8.53□□□□□ -1.04
PDGFRA-204ENST00000504461 A0A1B0GW15 77 aa8.53□□□□□ -1.04
PDGFRA-204ENST00000504461 HIGD1CA8MV81 97 aa8.53□□□□□ -1.04
PDGFRA-204ENST00000504461 CRYGDP07320 174 aa8.53□□□□□ -1.04
PDGFRA-204ENST00000504461 BTF3P20290 206 aaKnown RBP8.53□□□□□ -1.04
PDGFRA-204ENST00000504461 RHOHQ15669 191 aa8.53□□□□□ -1.04
PDGFRA-204ENST00000504461 NDUFA5Q16718 116 aa8.53□□□□□ -1.04
PDGFRA-204ENST00000504461 UFSP1Q6NVU6 142 aa8.53□□□□□ -1.04
PDGFRA-204ENST00000504461 SPATA12Q7Z6I5 190 aa8.53□□□□□ -1.04
PDGFRA-204ENST00000504461 GTSF1Q8WW33 167 aa8.53□□□□□ -1.04
PDGFRA-204ENST00000504461 HERC2O95714 4834 aa8.53□□□□□ -1.04
PDGFRA-204ENST00000504461 TRBV10-1A0A0K0K1A3 114 aa8.52□□□□□ -1.05
PDGFRA-204ENST00000504461 A0A1B0GUT8 65 aa8.52□□□□□ -1.05
PDGFRA-204ENST00000504461 SMIM27A0A1W2PRY6 76 aa8.52□□□□□ -1.05
PDGFRA-204ENST00000504461 RIGQ13278 110 aa8.52□□□□□ -1.05
PDGFRA-204ENST00000504461 C10orf91Q5T1B1 145 aa8.52□□□□□ -1.05
PDGFRA-204ENST00000504461 NEGR1Q7Z3B1 354 aa8.52□□□□□ -1.05
PDGFRA-204ENST00000504461 SLC25A29Q8N8R3 303 aa8.52□□□□□ -1.05
PDGFRA-204ENST00000504461 FRZBQ92765 325 aa8.52□□□□□ -1.05
PDGFRA-204ENST00000504461 IMMP2LQ96T52 175 aa8.52□□□□□ -1.05
PDGFRA-204ENST00000504461 CTDSP1Q9GZU7 261 aa8.52□□□□□ -1.05
PDGFRA-204ENST00000504461 H7C1H1 209 aa8.51□□□□□ -1.05
PDGFRA-204ENST00000504461 S100A8P05109 93 aa8.51□□□□□ -1.05
PDGFRA-204ENST00000504461 FAM74A4Q5TZK3 123 aa8.51□□□□□ -1.05
PDGFRA-204ENST00000504461 LYPD5Q6UWN5 251 aa8.51□□□□□ -1.05
PDGFRA-204ENST00000504461 C14orf178Q8N769 122 aaPredicted RBP8.51□□□□□ -1.05
PDGFRA-204ENST00000504461 PGLYRP4Q96LB8 373 aa8.51□□□□□ -1.05
PDGFRA-204ENST00000504461 TMEM242Q9NWH2 141 aa8.51□□□□□ -1.05
PDGFRA-204ENST00000504461 PKHD1P08F94 4074 aa8.5□□□□□ -1.05
PDGFRA-204ENST00000504461 A0A087WWL8 130 aa8.5□□□□□ -1.05
PDGFRA-204ENST00000504461 MUC21A0A0G2JKD1 596 aa8.5□□□□□ -1.05
PDGFRA-204ENST00000504461 MUC21A0A140T8X8 626 aa8.5□□□□□ -1.05
PDGFRA-204ENST00000504461 F5H697 171 aa8.5□□□□□ -1.05
PDGFRA-204ENST00000504461 GYPEP15421 78 aa8.5□□□□□ -1.05
PDGFRA-204ENST00000504461 SRIP30626 198 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms