RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 SFRP2Q96HF1 295 aa11.46□□□□□ -0.57
SCLT1-205ENST00000503401 SEC11CQ9BY50 192 aa11.46□□□□□ -0.57
SCLT1-205ENST00000503401 P0DMU3 169 aa11.46□□□□□ -0.58
SCLT1-205ENST00000503401 FAM231AP0DMU4 169 aa11.46□□□□□ -0.58
SCLT1-205ENST00000503401 FAM231CP0DMU5 169 aa11.46□□□□□ -0.58
SCLT1-205ENST00000503401 UFSP1Q6NVU6 142 aa11.46□□□□□ -0.58
SCLT1-205ENST00000503401 LYZL1Q6UWQ5 148 aa11.46□□□□□ -0.58
SCLT1-205ENST00000503401 SLC25A29Q8N8R3 303 aa11.46□□□□□ -0.58
SCLT1-205ENST00000503401 ISOC2Q96AB3 205 aa11.46□□□□□ -0.58
SCLT1-205ENST00000503401 CARHSP1Q9Y2V2 147 aaKnown RBP11.46□□□□□ -0.58
SCLT1-205ENST00000503401 GYPEP15421 78 aa11.45□□□□□ -0.58
SCLT1-205ENST00000503401 UBE2DNLQ8IWF7 75 aa11.45□□□□□ -0.58
SCLT1-205ENST00000503401 GTSF1Q8WW33 167 aa11.45□□□□□ -0.58
SCLT1-205ENST00000503401 MSRB1Q9NZV6 116 aa11.45□□□□□ -0.58
SCLT1-205ENST00000503401 K7EQD1 137 aa11.44□□□□□ -0.58
SCLT1-205ENST00000503401 CRYGDP07320 174 aa11.44□□□□□ -0.58
SCLT1-205ENST00000503401 ZFP2Q6ZN57 461 aa11.44□□□□□ -0.58
SCLT1-205ENST00000503401 ICOSQ9Y6W8 199 aa11.44□□□□□ -0.58
SCLT1-205ENST00000503401 A0A1W2PPQ1 181 aa11.43□□□□□ -0.58
SCLT1-205ENST00000503401 OSTCQ9NRP0 149 aa11.43□□□□□ -0.58
SCLT1-205ENST00000503401 A8MWL6 223 aa11.42□□□□□ -0.58
SCLT1-205ENST00000503401 F2Z2F3 143 aa11.42□□□□□ -0.58
SCLT1-205ENST00000503401 CIDEAO60543 219 aa11.42□□□□□ -0.58
SCLT1-205ENST00000503401 CTRLP40313 264 aa11.42□□□□□ -0.58
SCLT1-205ENST00000503401 C14orf178Q8N769 122 aaPredicted RBP11.42□□□□□ -0.58
SCLT1-205ENST00000503401 Q9UF83 564 aa11.42□□□□□ -0.58
SCLT1-205ENST00000503401 TRBV6-4A0A1B0GX49 114 aa11.42□□□□□ -0.58
SCLT1-205ENST00000503401 RHODO00212 210 aa11.42□□□□□ -0.58
SCLT1-205ENST00000503401 ESRGQ1W209 222 aa11.42□□□□□ -0.58
SCLT1-205ENST00000503401 C15orf54Q8N8G6 183 aa11.42□□□□□ -0.58
SCLT1-205ENST00000503401 LINC00588Q9Y4M8 146 aa11.42□□□□□ -0.58
SCLT1-205ENST00000503401 V9GYV3 84 aa11.42□□□□□ -0.58
SCLT1-205ENST00000503401 F8W036 122 aa11.41□□□□□ -0.58
SCLT1-205ENST00000503401 NTF3P20783 257 aa11.41□□□□□ -0.58
SCLT1-205ENST00000503401 CCL18P55774 89 aa11.41□□□□□ -0.58
SCLT1-205ENST00000503401 CACNG7P62955 275 aa11.41□□□□□ -0.58
SCLT1-205ENST00000503401 RHOHQ15669 191 aa11.41□□□□□ -0.58
SCLT1-205ENST00000503401 MRPL23Q16540 153 aaKnown RBP11.41□□□□□ -0.58
SCLT1-205ENST00000503401 CT83Q5H943 113 aa11.41□□□□□ -0.58
SCLT1-205ENST00000503401 PGLYRP4Q96LB8 373 aa11.41□□□□□ -0.58
SCLT1-205ENST00000503401 PRADC1Q9BSG0 188 aa11.41□□□□□ -0.58
SCLT1-205ENST00000503401 DNAH2Q9P225 4427 aa11.41□□□□□ -0.58
SCLT1-205ENST00000503401 SRIP30626 198 aa11.4□□□□□ -0.58
SCLT1-205ENST00000503401 OR10G8Q8NGN5 311 aa11.4□□□□□ -0.58
SCLT1-205ENST00000503401 TSKUQ8WUA8 353 aa11.4□□□□□ -0.58
SCLT1-205ENST00000503401 AP1S3Q96PC3 154 aa11.4□□□□□ -0.58
SCLT1-205ENST00000503401 ZNF56Q15929 161 aa11.39□□□□□ -0.59
SCLT1-205ENST00000503401 RNF212Q495C1 297 aa11.39□□□□□ -0.59
SCLT1-205ENST00000503401 HIGD1CA8MV81 97 aa11.38□□□□□ -0.59
SCLT1-205ENST00000503401 EVI2AP22794 236 aa11.38□□□□□ -0.59
SCLT1-205ENST00000503401 TWIST1Q15672 202 aa11.38□□□□□ -0.59
SCLT1-205ENST00000503401 NEGR1Q7Z3B1 354 aa11.38□□□□□ -0.59
SCLT1-205ENST00000503401 CNFNQ9BYD5 112 aa11.38□□□□□ -0.59
SCLT1-205ENST00000503401 KIF25-AS1Q9Y6Z4 181 aa11.38□□□□□ -0.59
SCLT1-205ENST00000503401 IGLV2-18A0A075B6J9 118 aa11.38□□□□□ -0.59
SCLT1-205ENST00000503401 SMIM17P0DL12 118 aa11.38□□□□□ -0.59
SCLT1-205ENST00000503401 GAGE12JA6NER3 117 aa11.37□□□□□ -0.59
SCLT1-205ENST00000503401 F5H697 171 aa11.37□□□□□ -0.59
SCLT1-205ENST00000503401 MGPP08493 103 aa11.37□□□□□ -0.59
SCLT1-205ENST00000503401 LINC00315P59091 139 aa11.37□□□□□ -0.59
SCLT1-205ENST00000503401 GAGE1Q13065 139 aa11.37□□□□□ -0.59
SCLT1-205ENST00000503401 GAGE4Q13068 117 aa11.37□□□□□ -0.59
SCLT1-205ENST00000503401 GAGE5Q13069 117 aa11.37□□□□□ -0.59
SCLT1-205ENST00000503401 GAGE13Q4V321 117 aa11.37□□□□□ -0.59
SCLT1-205ENST00000503401 LYPD5Q6UWN5 251 aa11.37□□□□□ -0.59
SCLT1-205ENST00000503401 APOC3P02656 99 aa11.36□□□□□ -0.59
SCLT1-205ENST00000503401 FOXA3P55318 350 aaPredicted RBP11.36□□□□□ -0.59
SCLT1-205ENST00000503401 WDR73Q6P4I2 378 aa11.36□□□□□ -0.59
SCLT1-205ENST00000503401 GFRA4Q9GZZ7 299 aa11.36□□□□□ -0.59
SCLT1-205ENST00000503401 DNAH10Q8IVF4 4471 aa11.36□□□□□ -0.59
SCLT1-205ENST00000503401 M0R2N4 97 aa11.35□□□□□ -0.59
SCLT1-205ENST00000503401 TRGC1P0CF51 173 aa11.35□□□□□ -0.59
SCLT1-205ENST00000503401 RAB4BP61018 213 aa11.35□□□□□ -0.59
SCLT1-205ENST00000503401 SVBPQ8N300 66 aa11.35□□□□□ -0.59
SCLT1-205ENST00000503401 ZNRF2Q8NHG8 242 aa11.35□□□□□ -0.59
SCLT1-205ENST00000503401 PNRC1Q12796 327 aaPredicted RBP11.35□□□□□ -0.59
SCLT1-205ENST00000503401 NUP35Q8NFH5 326 aa11.35□□□□□ -0.59
SCLT1-205ENST00000503401 FRAS1Q86XX4 4008 aa11.34□□□□□ -0.59
SCLT1-205ENST00000503401 FAM231BA6NCW3 169 aa11.34□□□□□ -0.59
SCLT1-205ENST00000503401 MRPS16Q9Y3D3 137 aaKnown RBP11.34□□□□□ -0.59
SCLT1-205ENST00000503401 SMIM27A0A1W2PRY6 76 aa11.33□□□□□ -0.6
SCLT1-205ENST00000503401 LINC00694P0DN24 101 aa11.33□□□□□ -0.6
SCLT1-205ENST00000503401 CLRN3Q8NCR9 226 aa11.33□□□□□ -0.6
SCLT1-205ENST00000503401 BORCS7Q96B45 105 aa11.33□□□□□ -0.6
SCLT1-205ENST00000503401 DPH3P1Q9H4G8 78 aa11.33□□□□□ -0.6
SCLT1-205ENST00000503401 A0A1B0GUT8 65 aa11.32□□□□□ -0.6
SCLT1-205ENST00000503401 FAM3BP58499 235 aaPredicted RBP11.32□□□□□ -0.6
SCLT1-205ENST00000503401 SUMO4Q6EEV6 95 aa11.32□□□□□ -0.6
SCLT1-205ENST00000503401 ATRAIDQ6UW56 229 aa11.32□□□□□ -0.6
SCLT1-205ENST00000503401 ATP6V0E2Q8NHE4 81 aa11.32□□□□□ -0.6
SCLT1-205ENST00000503401 Q9H8V8 135 aa11.32□□□□□ -0.6
SCLT1-205ENST00000503401 NAT8BQ9UHF3 227 aa11.32□□□□□ -0.6
SCLT1-205ENST00000503401 SH2D6Q7Z4S9 175 aa11.31□□□□□ -0.6
SCLT1-205ENST00000503401 NEXN-AS1Q8NBZ9 246 aa11.31□□□□□ -0.6
SCLT1-205ENST00000503401 UPK3BQ9BT76 320 aa11.31□□□□□ -0.6
SCLT1-205ENST00000503401 TRBV10-1A0A0K0K1A3 114 aa11.31□□□□□ -0.6
SCLT1-205ENST00000503401 SNAPINO95295 136 aa11.31□□□□□ -0.6
SCLT1-205ENST00000503401 TRAV26-2A0A0B4J265 109 aa11.3□□□□□ -0.6
SCLT1-205ENST00000503401 M0QY20 66 aa11.3□□□□□ -0.6
SCLT1-205ENST00000503401 RPL36AP83881 106 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms