RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 MUC21A0A140T8X8 626 aa5.04□□□□□ -1.6
USP46-203ENST00000502443 TRBV6-4A0A1B0GX49 114 aa5.04□□□□□ -1.6
USP46-203ENST00000502443 XKRY2A2RUG3 117 aa5.04□□□□□ -1.6
USP46-203ENST00000502443 K7EN84 100 aa5.04□□□□□ -1.6
USP46-203ENST00000502443 RHODO00212 210 aa5.04□□□□□ -1.6
USP46-203ENST00000502443 OR5AL1P0C617 328 aa5.04□□□□□ -1.6
USP46-203ENST00000502443 MED14OSP0DP75 135 aa5.04□□□□□ -1.6
USP46-203ENST00000502443 GZMBP10144 247 aa5.04□□□□□ -1.6
USP46-203ENST00000502443 RPS20P60866 119 aaKnown RBP5.04□□□□□ -1.6
USP46-203ENST00000502443 RHOHQ15669 191 aa5.04□□□□□ -1.6
USP46-203ENST00000502443 FAM74A3Q4VXF1 159 aa5.04□□□□□ -1.6
USP46-203ENST00000502443 SPANXN1Q5VSR9 72 aa5.04□□□□□ -1.6
USP46-203ENST00000502443 LYPD5Q6UWN5 251 aa5.04□□□□□ -1.6
USP46-203ENST00000502443 ZFP2Q6ZN57 461 aa5.04□□□□□ -1.6
USP46-203ENST00000502443 NUDT10Q8NFP7 164 aa5.04□□□□□ -1.6
USP46-203ENST00000502443 OR10AG1Q8NH19 301 aa5.04□□□□□ -1.6
USP46-203ENST00000502443 NUDT11Q96G61 164 aa5.04□□□□□ -1.6
USP46-203ENST00000502443 SFRP2Q96HF1 295 aa5.04□□□□□ -1.6
USP46-203ENST00000502443 SMIM7Q9BQ49 75 aa5.04□□□□□ -1.6
USP46-203ENST00000502443 TPPP3Q9BW30 176 aa5.04□□□□□ -1.6
USP46-203ENST00000502443 SSBP4Q9BWG4 385 aaPredicted RBP5.04□□□□□ -1.6
USP46-203ENST00000502443 Q9H8V8 135 aa5.04□□□□□ -1.6
USP46-203ENST00000502443 MRPS16Q9Y3D3 137 aaKnown RBP5.04□□□□□ -1.6
USP46-203ENST00000502443 C7orf77A4D0Y5 90 aa5.03□□□□□ -1.6
USP46-203ENST00000502443 ZNF727A8MUV8 499 aa5.03□□□□□ -1.6
USP46-203ENST00000502443 SNAI2O43623 268 aa5.03□□□□□ -1.6
USP46-203ENST00000502443 CRYGDP07320 174 aa5.03□□□□□ -1.6
USP46-203ENST00000502443 TMEM241Q24JQ0 296 aa5.03□□□□□ -1.6
USP46-203ENST00000502443 UFSP1Q6NVU6 142 aa5.03□□□□□ -1.6
USP46-203ENST00000502443 Q6ZSN1 163 aa5.03□□□□□ -1.6
USP46-203ENST00000502443 SH2D6Q7Z4S9 175 aa5.03□□□□□ -1.6
USP46-203ENST00000502443 FER1L6-AS1Q8NA97 138 aa5.03□□□□□ -1.6
USP46-203ENST00000502443 UPK3BQ9BT76 320 aa5.03□□□□□ -1.6
USP46-203ENST00000502443 RNASE7Q9H1E1 156 aaKnown RBP5.03□□□□□ -1.6
USP46-203ENST00000502443 NBDYA0A0U1RRE5 68 aa5.02□□□□□ -1.61
USP46-203ENST00000502443 NXPH4O95158 308 aa5.02□□□□□ -1.61
USP46-203ENST00000502443 IGLC6P0CF74 106 aa5.02□□□□□ -1.61
USP46-203ENST00000502443 ERVFC1-1P60608 527 aa5.02□□□□□ -1.61
USP46-203ENST00000502443 RPL23P62829 140 aaKnown RBP5.02□□□□□ -1.61
USP46-203ENST00000502443 RHEBQ15382 184 aa5.02□□□□□ -1.61
USP46-203ENST00000502443 Q6ZR54 194 aa5.02□□□□□ -1.61
USP46-203ENST00000502443 C14orf178Q8N769 122 aaPredicted RBP5.02□□□□□ -1.61
USP46-203ENST00000502443 RPP21Q9H633 154 aaKnown RBP5.02□□□□□ -1.61
USP46-203ENST00000502443 NAT8Q9UHE5 227 aa5.02□□□□□ -1.61
USP46-203ENST00000502443 LY96Q9Y6Y9 160 aa5.02□□□□□ -1.61
USP46-203ENST00000502443 VPS13DQ5THJ4 4388 aa5.02□□□□□ -1.61
USP46-203ENST00000502443 A0A087WWC5 75 aa5.01□□□□□ -1.61
USP46-203ENST00000502443 A0A1W2PPQ1 181 aa5.01□□□□□ -1.61
USP46-203ENST00000502443 GAGE12JA6NER3 117 aa5.01□□□□□ -1.61
USP46-203ENST00000502443 F2Z2F3 143 aa5.01□□□□□ -1.61
USP46-203ENST00000502443 F5H697 171 aa5.01□□□□□ -1.61
USP46-203ENST00000502443 SIVA1O15304 175 aa5.01□□□□□ -1.61
USP46-203ENST00000502443 GATCO43716 136 aaKnown RBP5.01□□□□□ -1.61
USP46-203ENST00000502443 SMIM17P0DL12 118 aa5.01□□□□□ -1.61
USP46-203ENST00000502443 CACNG7P62955 275 aa5.01□□□□□ -1.61
USP46-203ENST00000502443 PNRC1Q12796 327 aaPredicted RBP5.01□□□□□ -1.61
USP46-203ENST00000502443 GAGE1Q13065 139 aa5.01□□□□□ -1.61
USP46-203ENST00000502443 GAGE4Q13068 117 aa5.01□□□□□ -1.61
USP46-203ENST00000502443 GAGE5Q13069 117 aa5.01□□□□□ -1.61
USP46-203ENST00000502443 ZNF56Q15929 161 aa5.01□□□□□ -1.61
USP46-203ENST00000502443 GAGE13Q4V321 117 aa5.01□□□□□ -1.61
USP46-203ENST00000502443 C1orf134Q5TEV5 83 aa5.01□□□□□ -1.61
USP46-203ENST00000502443 LYZL1Q6UWQ5 148 aa5.01□□□□□ -1.61
USP46-203ENST00000502443 LINC01551Q86U37 167 aa5.01□□□□□ -1.61
USP46-203ENST00000502443 CBLN2Q8IUK8 224 aa5.01□□□□□ -1.61
USP46-203ENST00000502443 ATP6V0E2Q8NHE4 81 aa5.01□□□□□ -1.61
USP46-203ENST00000502443 AP1S3Q96PC3 154 aa5.01□□□□□ -1.61
USP46-203ENST00000502443 RPS10P5Q9NQ39 176 aa5.01□□□□□ -1.61
USP46-203ENST00000502443 MSRB1Q9NZV6 116 aa5.01□□□□□ -1.61
USP46-203ENST00000502443 Q9UF83 564 aa5.01□□□□□ -1.61
USP46-203ENST00000502443 A8MWL6 223 aa5□□□□□ -1.61
USP46-203ENST00000502443 NTF3P20783 257 aa5□□□□□ -1.61
USP46-203ENST00000502443 CTRLP40313 264 aa5□□□□□ -1.61
USP46-203ENST00000502443 RAB4BP61018 213 aa5□□□□□ -1.61
USP46-203ENST00000502443 ADIRFQ15847 76 aa5□□□□□ -1.61
USP46-203ENST00000502443 TTC32Q5I0X7 151 aa5□□□□□ -1.61
USP46-203ENST00000502443 LINC00336Q6ZUF6 198 aa5□□□□□ -1.61
USP46-203ENST00000502443 FAM231DQ6ZW35 169 aa5□□□□□ -1.61
USP46-203ENST00000502443 WFDC10BQ8IUB3 73 aa5□□□□□ -1.61
USP46-203ENST00000502443 YPEL4Q96NS1 127 aa5□□□□□ -1.61
USP46-203ENST00000502443 GTSF1LQ9H1H1 148 aa5□□□□□ -1.61
USP46-203ENST00000502443 SMCO4Q9NRQ5 59 aa5□□□□□ -1.61
USP46-203ENST00000502443 DNAH6Q9C0G6 4158 aa4.99□□□□□ -1.61
USP46-203ENST00000502443 TRAV8-6A0A0B4J262 113 aa4.99□□□□□ -1.61
USP46-203ENST00000502443 TRBV10-1A0A0K0K1A3 114 aa4.99□□□□□ -1.61
USP46-203ENST00000502443 COLCA2A8K830 154 aa4.99□□□□□ -1.61
USP46-203ENST00000502443 RTL8CO15255 209 aa4.99□□□□□ -1.61
USP46-203ENST00000502443 MGPP08493 103 aa4.99□□□□□ -1.61
USP46-203ENST00000502443 TRGC1P0CF51 173 aa4.99□□□□□ -1.61
USP46-203ENST00000502443 EVI2AP22794 236 aa4.99□□□□□ -1.61
USP46-203ENST00000502443 TIRAPP58753 221 aa4.99□□□□□ -1.61
USP46-203ENST00000502443 TWIST1Q15672 202 aa4.99□□□□□ -1.61
USP46-203ENST00000502443 OR10J3Q5JRS4 329 aa4.99□□□□□ -1.61
USP46-203ENST00000502443 C6orf223Q8N319 242 aa4.99□□□□□ -1.61
USP46-203ENST00000502443 C15orf54Q8N8G6 183 aa4.99□□□□□ -1.61
USP46-203ENST00000502443 GTSF1Q8WW33 167 aa4.99□□□□□ -1.61
USP46-203ENST00000502443 ISOC2Q96AB3 205 aa4.99□□□□□ -1.61
USP46-203ENST00000502443 KRTAP1-5Q9BYS1 174 aa4.99□□□□□ -1.61
USP46-203ENST00000502443 CTDSP1Q9GZU7 261 aa4.99□□□□□ -1.61
USP46-203ENST00000502443 TMEM242Q9NWH2 141 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms