RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	LY96	Q9Y6Y9	160 aa		7.21	□□□□□ -1.26
FXR1-222	ENST00000498658	TRAV8-6	A0A0B4J262	113 aa		7.2	□□□□□ -1.26
FXR1-222	ENST00000498658	LOC100131303	A0A0U1RQF7	123 aa		7.2	□□□□□ -1.26
FXR1-222	ENST00000498658	XKRY2	A2RUG3	117 aa		7.2	□□□□□ -1.26
FXR1-222	ENST00000498658	OR5AL1	P0C617	328 aa		7.2	□□□□□ -1.26
FXR1-222	ENST00000498658	ALKAL2	Q6UX46	152 aa		7.2	□□□□□ -1.26
FXR1-222	ENST00000498658	NFE4	Q86UQ8	179 aa		7.2	□□□□□ -1.26
FXR1-222	ENST00000498658	C10orf126	Q8N4M7	172 aa		7.2	□□□□□ -1.26
FXR1-222	ENST00000498658	SFRP2	Q96HF1	295 aa		7.2	□□□□□ -1.26
FXR1-222	ENST00000498658	DERL1	Q9BUN8	251 aa		7.2	□□□□□ -1.26
FXR1-222	ENST00000498658		A0A1B0GVY2	172 aa		7.19	□□□□□ -1.26
FXR1-222	ENST00000498658	DNAH10OS	P0CZ25	163 aa		7.19	□□□□□ -1.26
FXR1-222	ENST00000498658	FAM74A4	Q5TZK3	123 aa		7.19	□□□□□ -1.26
FXR1-222	ENST00000498658	SPANXN1	Q5VSR9	72 aa		7.19	□□□□□ -1.26
FXR1-222	ENST00000498658	UFSP1	Q6NVU6	142 aa		7.19	□□□□□ -1.26
FXR1-222	ENST00000498658	ZNF575	Q86XF7	245 aa		7.19	□□□□□ -1.26
FXR1-222	ENST00000498658	ATP6V0E2	Q8NHE4	81 aa		7.19	□□□□□ -1.26
FXR1-222	ENST00000498658	GTSF1L	Q9H1H1	148 aa		7.19	□□□□□ -1.26
FXR1-222	ENST00000498658		A0A087WWC5	75 aa		7.18	□□□□□ -1.26
FXR1-222	ENST00000498658	TRBV10-1	A0A0K0K1A3	114 aa		7.18	□□□□□ -1.26
FXR1-222	ENST00000498658		A0A1B0GVG6	124 aa		7.18	□□□□□ -1.26
FXR1-222	ENST00000498658	RAB19	A4D1S5	217 aa		7.18	□□□□□ -1.26
FXR1-222	ENST00000498658	RBFOX3	A6NFN3	312 aa		7.18	□□□□□ -1.26
FXR1-222	ENST00000498658	TMEM250	H0YL14	139 aa		7.18	□□□□□ -1.26
FXR1-222	ENST00000498658	SNAI2	O43623	268 aa		7.18	□□□□□ -1.26
FXR1-222	ENST00000498658	NDUFS6	O75380	124 aa	Known RBP	7.18	□□□□□ -1.26
FXR1-222	ENST00000498658		P01737	135 aa		7.18	□□□□□ -1.26
FXR1-222	ENST00000498658	RPL19	P84098	196 aa	Known RBP	7.18	□□□□□ -1.26
FXR1-222	ENST00000498658	LELP1	Q5T871	98 aa		7.18	□□□□□ -1.26
FXR1-222	ENST00000498658	LYPD6B	Q8NI32	183 aa		7.18	□□□□□ -1.26
FXR1-222	ENST00000498658	SAMD10	Q9BYL1	202 aa		7.18	□□□□□ -1.26
FXR1-222	ENST00000498658	KRTAP1-5	Q9BYS1	174 aa		7.18	□□□□□ -1.26
FXR1-222	ENST00000498658	IGHV3-38	A0A0C4DH36	116 aa		7.17	□□□□□ -1.26
FXR1-222	ENST00000498658	C19orf71	A6NCJ1	209 aa		7.17	□□□□□ -1.26
FXR1-222	ENST00000498658		F2Z2F3	143 aa		7.17	□□□□□ -1.26
FXR1-222	ENST00000498658	IGLV2-8	P01709	118 aa		7.17	□□□□□ -1.26
FXR1-222	ENST00000498658	CRYGD	P07320	174 aa		7.17	□□□□□ -1.26
FXR1-222	ENST00000498658	SMIM17	P0DL12	118 aa		7.17	□□□□□ -1.26
FXR1-222	ENST00000498658	NKX2-5	P52952	324 aa	Predicted RBP	7.17	□□□□□ -1.26
FXR1-222	ENST00000498658	RAB4B	P61018	213 aa		7.17	□□□□□ -1.26
FXR1-222	ENST00000498658	OR10J3	Q5JRS4	329 aa		7.17	□□□□□ -1.26
FXR1-222	ENST00000498658		Q6ZSN1	163 aa		7.17	□□□□□ -1.26
FXR1-222	ENST00000498658	WFDC10B	Q8IUB3	73 aa		7.17	□□□□□ -1.26
FXR1-222	ENST00000498658	OR10AG1	Q8NH19	301 aa		7.17	□□□□□ -1.26
FXR1-222	ENST00000498658	JPT2	Q9H910	190 aa		7.17	□□□□□ -1.26
FXR1-222	ENST00000498658	PKD1	P98161	4303 aa		7.16	□□□□□ -1.26
FXR1-222	ENST00000498658		A0A087WWL8	130 aa		7.16	□□□□□ -1.26
FXR1-222	ENST00000498658	GAGE12J	A6NER3	117 aa		7.16	□□□□□ -1.26
FXR1-222	ENST00000498658	LINC00315	P59091	139 aa		7.16	□□□□□ -1.26
FXR1-222	ENST00000498658	CACNG7	P62955	275 aa		7.16	□□□□□ -1.26
FXR1-222	ENST00000498658	GAGE1	Q13065	139 aa		7.16	□□□□□ -1.26
FXR1-222	ENST00000498658	GAGE4	Q13068	117 aa		7.16	□□□□□ -1.26
FXR1-222	ENST00000498658	GAGE5	Q13069	117 aa		7.16	□□□□□ -1.26
FXR1-222	ENST00000498658	GAGE13	Q4V321	117 aa		7.16	□□□□□ -1.26
FXR1-222	ENST00000498658	LINC01556	Q5JQF7	62 aa		7.16	□□□□□ -1.26
FXR1-222	ENST00000498658	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	7.16	□□□□□ -1.26
FXR1-222	ENST00000498658	FER1L6-AS1	Q8NA97	138 aa		7.16	□□□□□ -1.26
FXR1-222	ENST00000498658	OR2D3	Q8NGH3	330 aa		7.16	□□□□□ -1.26
FXR1-222	ENST00000498658	AP1S3	Q96PC3	154 aa		7.16	□□□□□ -1.26
FXR1-222	ENST00000498658	PKHD1	P08F94	4074 aa		7.16	□□□□□ -1.26
FXR1-222	ENST00000498658	TRBV20OR9-2	A0A075B6H5	130 aa		7.15	□□□□□ -1.26
FXR1-222	ENST00000498658	LINC00694	P0DN24	101 aa		7.15	□□□□□ -1.26
FXR1-222	ENST00000498658	RPL36A	P83881	106 aa	Known RBP	7.15	□□□□□ -1.26
FXR1-222	ENST00000498658	ZNF56	Q15929	161 aa		7.15	□□□□□ -1.26
FXR1-222	ENST00000498658	C14orf178	Q8N769	122 aa	Predicted RBP	7.15	□□□□□ -1.26
FXR1-222	ENST00000498658	RPL36AL	Q969Q0	106 aa	Known RBP	7.15	□□□□□ -1.26
FXR1-222	ENST00000498658	EIF5A2	Q9GZV4	153 aa	Known RBP	7.15	□□□□□ -1.26
FXR1-222	ENST00000498658	MSRB1	Q9NZV6	116 aa		7.15	□□□□□ -1.26
FXR1-222	ENST00000498658	TRBV7-3	A0A075B6L6	115 aa		7.14	□□□□□ -1.27
FXR1-222	ENST00000498658	IGLC6	P0CF74	106 aa		7.14	□□□□□ -1.27
FXR1-222	ENST00000498658	TPPP3	Q9BW30	176 aa		7.14	□□□□□ -1.27
FXR1-222	ENST00000498658		F5H697	171 aa		7.13	□□□□□ -1.27
FXR1-222	ENST00000498658	TRGC1	P0CF51	173 aa		7.13	□□□□□ -1.27
FXR1-222	ENST00000498658	ERVFC1-1	P60608	527 aa		7.13	□□□□□ -1.27
FXR1-222	ENST00000498658	TOR2A	Q5JU69	321 aa		7.13	□□□□□ -1.27
FXR1-222	ENST00000498658	WDR73	Q6P4I2	378 aa		7.13	□□□□□ -1.27
FXR1-222	ENST00000498658	NUDT10	Q8NFP7	164 aa		7.13	□□□□□ -1.27
FXR1-222	ENST00000498658	OR10G8	Q8NGN5	311 aa		7.13	□□□□□ -1.27
FXR1-222	ENST00000498658	OCC1	Q8TAD7	63 aa		7.13	□□□□□ -1.27
FXR1-222	ENST00000498658	NUDT11	Q96G61	164 aa		7.13	□□□□□ -1.27
FXR1-222	ENST00000498658	FAM210A	Q96ND0	272 aa		7.13	□□□□□ -1.27
FXR1-222	ENST00000498658	RPP21	Q9H633	154 aa	Known RBP	7.13	□□□□□ -1.27
FXR1-222	ENST00000498658	IBA57-AS1	B1ANH7	110 aa		7.12	□□□□□ -1.27
FXR1-222	ENST00000498658		H7C1H1	209 aa		7.12	□□□□□ -1.27
FXR1-222	ENST00000498658	GZMB	P10144	247 aa		7.12	□□□□□ -1.27
FXR1-222	ENST00000498658	SST	P61278	116 aa		7.12	□□□□□ -1.27
FXR1-222	ENST00000498658	LAGE3	Q14657	143 aa		7.12	□□□□□ -1.27
FXR1-222	ENST00000498658	TMEM97	Q5BJF2	176 aa		7.12	□□□□□ -1.27
FXR1-222	ENST00000498658	KCNIP4	Q6PIL6	250 aa		7.12	□□□□□ -1.27
FXR1-222	ENST00000498658		Q6ZRN7	208 aa	Predicted RBP	7.12	□□□□□ -1.27
FXR1-222	ENST00000498658	URGCP-MRPS24	S4R325	110 aa		7.12	□□□□□ -1.27
FXR1-222	ENST00000498658	DNAH11	Q96DT5	4516 aa		7.11	□□□□□ -1.27
FXR1-222	ENST00000498658	MUC21	A0A0G2JKD1	596 aa		7.11	□□□□□ -1.27
FXR1-222	ENST00000498658	MUC21	A0A140T8X8	626 aa		7.11	□□□□□ -1.27
FXR1-222	ENST00000498658	C16orf90	A8MZG2	172 aa		7.11	□□□□□ -1.27
FXR1-222	ENST00000498658	CTRL	P40313	264 aa		7.11	□□□□□ -1.27
FXR1-222	ENST00000498658	CEBPG	P53567	150 aa		7.11	□□□□□ -1.27
FXR1-222	ENST00000498658	UBE2D3	P61077	147 aa		7.11	□□□□□ -1.27
FXR1-222	ENST00000498658	UBE2D2	P62837	147 aa		7.11	□□□□□ -1.27
FXR1-222	ENST00000498658	TEX261	Q6UWH6	196 aa		7.11	□□□□□ -1.27

Retrieved 100 of 20,778 RNA–protein pairs in 85 ms