RNA–Protein interactions for RNA: ENST00000498213.1

USP54-217, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 815 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-217ENST00000498213 FAM19A4Q96LR4 140 aa2.58□□□□□ -2
USP54-217ENST00000498213 ATP5SQ99766 215 aa2.58□□□□□ -2
USP54-217ENST00000498213 ARV1Q9H2C2 271 aa2.58□□□□□ -2
USP54-217ENST00000498213 SLC25A22Q9H936 323 aa2.58□□□□□ -2
USP54-217ENST00000498213 LYRM2Q9NU23 88 aaPredicted RBP2.58□□□□□ -2
USP54-217ENST00000498213 HHLA3Q9XRX5 114 aa2.58□□□□□ -2
USP54-217ENST00000498213 A0A087WWC5 75 aa2.57□□□□□ -2
USP54-217ENST00000498213 TRAV8-3A0A0A6YYJ7 113 aa2.57□□□□□ -2
USP54-217ENST00000498213 TRAV8-6A0A0B4J262 113 aa2.57□□□□□ -2
USP54-217ENST00000498213 SERTM2A0A1B0GWG4 89 aa2.57□□□□□ -2
USP54-217ENST00000498213 KANTRA0A1W2PQU2 76 aa2.57□□□□□ -2
USP54-217ENST00000498213 FBLL1A6NHQ2 334 aaKnown RBP2.57□□□□□ -2
USP54-217ENST00000498213 F6UB75 175 aa2.57□□□□□ -2
USP54-217ENST00000498213 COX7A2P2O60397 106 aa2.57□□□□□ -2
USP54-217ENST00000498213 ATP6V1G1O75348 118 aa2.57□□□□□ -2
USP54-217ENST00000498213 NXPH4O95158 308 aa2.57□□□□□ -2
USP54-217ENST00000498213 OR5G3P0C626 314 aa2.57□□□□□ -2
USP54-217ENST00000498213 PET100P0DJ07 73 aa2.57□□□□□ -2
USP54-217ENST00000498213 RPL29P47914 159 aaKnown RBP2.57□□□□□ -2
USP54-217ENST00000498213 CAV2P51636 162 aa2.57□□□□□ -2
USP54-217ENST00000498213 HNRNPA3P51991 378 aaKnown RBP2.57□□□□□ -2
USP54-217ENST00000498213 CRYBA4P53673 196 aa2.57□□□□□ -2
USP54-217ENST00000498213 FXYD7P58549 80 aa2.57□□□□□ -2
USP54-217ENST00000498213 HBG1P69891 147 aa2.57□□□□□ -2
USP54-217ENST00000498213 HBG2P69892 147 aa2.57□□□□□ -2
USP54-217ENST00000498213 ATP6V1FQ16864 119 aa2.57□□□□□ -2
USP54-217ENST00000498213 KRTAP13-3Q3SY46 172 aa2.57□□□□□ -2
USP54-217ENST00000498213 SPANXN5Q5MJ07 72 aa2.57□□□□□ -2
USP54-217ENST00000498213 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
USP54-217ENST00000498213 LYPD5Q6UWN5 251 aa2.57□□□□□ -2
USP54-217ENST00000498213 Q6ZSA8 131 aa2.57□□□□□ -2
USP54-217ENST00000498213 LINC00305Q7Z4B0 112 aa2.57□□□□□ -2
USP54-217ENST00000498213 SLC51BQ86UW2 128 aa2.57□□□□□ -2
USP54-217ENST00000498213 C11orf72Q8NBR9 251 aa2.57□□□□□ -2
USP54-217ENST00000498213 INO80EQ8NBZ0 244 aaPredicted RBP2.57□□□□□ -2
USP54-217ENST00000498213 OR10G4Q8NGN3 311 aa2.57□□□□□ -2
USP54-217ENST00000498213 TMEM37Q8WXS4 190 aa2.57□□□□□ -2
USP54-217ENST00000498213 RMI2Q96E14 147 aa2.57□□□□□ -2
USP54-217ENST00000498213 VSIG2Q96IQ7 327 aa2.57□□□□□ -2
USP54-217ENST00000498213 CHCHD7Q9BUK0 85 aa2.57□□□□□ -2
USP54-217ENST00000498213 ZNF471Q9BX82 626 aaPredicted RBP2.57□□□□□ -2
USP54-217ENST00000498213 PARLQ9H300 379 aa2.57□□□□□ -2
USP54-217ENST00000498213 DNAJC4Q9NNZ3 241 aa2.57□□□□□ -2
USP54-217ENST00000498213 GSN-AS1Q9NRJ2 163 aa2.57□□□□□ -2
USP54-217ENST00000498213 ZNF586Q9NXT0 402 aa2.57□□□□□ -2
USP54-217ENST00000498213 PSENENQ9NZ42 101 aa2.57□□□□□ -2
USP54-217ENST00000498213 FUT9Q9Y231 359 aa2.57□□□□□ -2
USP54-217ENST00000498213 KLF12Q9Y4X4 402 aa2.57□□□□□ -2
USP54-217ENST00000498213 IGLV4-3A0A075B6K6 122 aa2.56□□□□□ -2
USP54-217ENST00000498213 TRAV12-2A0A075B6T6 113 aa2.56□□□□□ -2
USP54-217ENST00000498213 TRAV4A0A0B4J268 109 aa2.56□□□□□ -2
USP54-217ENST00000498213 IGHV3-38A0A0C4DH36 116 aa2.56□□□□□ -2
USP54-217ENST00000498213 UBE2L5PA0A1B0GUS4 154 aa2.56□□□□□ -2
USP54-217ENST00000498213 TRBV6-4A0A1B0GX49 114 aa2.56□□□□□ -2
USP54-217ENST00000498213 IBA57-AS1B1ANH7 110 aa2.56□□□□□ -2
USP54-217ENST00000498213 PSCAO43653 123 aa2.56□□□□□ -2
USP54-217ENST00000498213 EIF3GO75821 320 aaKnown RBP eCLIP2.56□□□□□ -2
USP54-217ENST00000498213 PVALBP20472 110 aaPredicted RBP2.56□□□□□ -2
USP54-217ENST00000498213 ATP6V0CP27449 155 aa2.56□□□□□ -2
USP54-217ENST00000498213 FHITP49789 147 aa2.56□□□□□ -2
USP54-217ENST00000498213 SULT1A1P50225 295 aa2.56□□□□□ -2
USP54-217ENST00000498213 PKIAP61925 76 aa2.56□□□□□ -2
USP54-217ENST00000498213 BAXQ07812 192 aa2.56□□□□□ -2
USP54-217ENST00000498213 SLC38A11Q08AI6 406 aa2.56□□□□□ -2
USP54-217ENST00000498213 ZNF266Q14584 549 aa2.56□□□□□ -2
USP54-217ENST00000498213 VWC2Q2TAL6 325 aa2.56□□□□□ -2
USP54-217ENST00000498213 CLLU1Q5K131 121 aa2.56□□□□□ -2
USP54-217ENST00000498213 TMEM78Q5T7P6 136 aa2.56□□□□□ -2
USP54-217ENST00000498213 C10orf113Q5VZT2 155 aa2.56□□□□□ -2
USP54-217ENST00000498213 Q6AWC8 147 aa2.56□□□□□ -2
USP54-217ENST00000498213 Q8N814 137 aa2.56□□□□□ -2
USP54-217ENST00000498213 HSD17B11Q8NBQ5 300 aa2.56□□□□□ -2
USP54-217ENST00000498213 OR5C1Q8NGR4 320 aa2.56□□□□□ -2
USP54-217ENST00000498213 KCNS1Q96KK3 526 aa2.56□□□□□ -2
USP54-217ENST00000498213 FAM218AQ96MZ4 157 aa2.56□□□□□ -2
USP54-217ENST00000498213 JPT2Q9H910 190 aa2.56□□□□□ -2
USP54-217ENST00000498213 TRBV19A0A075B6N1 114 aa2.55□□□□□ -2
USP54-217ENST00000498213 IGHV1OR15-1A0A075B7D0 117 aa2.55□□□□□ -2
USP54-217ENST00000498213 TRGV1A0A0A0MS02 117 aa2.55□□□□□ -2
USP54-217ENST00000498213 TRAV8-1A0A0A6YYK1 113 aa2.55□□□□□ -2
USP54-217ENST00000498213 TRGV4A0A0C4DH28 118 aa2.55□□□□□ -2
USP54-217ENST00000498213 LINC00862A6NCI5 91 aa2.55□□□□□ -2
USP54-217ENST00000498213 LRCOL1A6NCL2 159 aa2.55□□□□□ -2
USP54-217ENST00000498213 M0R2P5 195 aa2.55□□□□□ -2
USP54-217ENST00000498213 TAAR5O14804 337 aa2.55□□□□□ -2
USP54-217ENST00000498213 PHOX2AO14813 284 aa2.55□□□□□ -2
USP54-217ENST00000498213 AGPAT2O15120 278 aa2.55□□□□□ -2
USP54-217ENST00000498213 HMGB3O15347 200 aaKnown RBP2.55□□□□□ -2
USP54-217ENST00000498213 RS1O15537 224 aa2.55□□□□□ -2
USP54-217ENST00000498213 IFNA7P01567 189 aa2.55□□□□□ -2
USP54-217ENST00000498213 GPX1P07203 203 aa2.55□□□□□ -2
USP54-217ENST00000498213 CRYGDP07320 174 aa2.55□□□□□ -2
USP54-217ENST00000498213 CT45A10P0DMU9 189 aa2.55□□□□□ -2
USP54-217ENST00000498213 MGST1P10620 155 aaKnown RBP2.55□□□□□ -2
USP54-217ENST00000498213 TPT1P13693 172 aaKnown RBP2.55□□□□□ -2
USP54-217ENST00000498213 HTN1P15515 57 aa2.55□□□□□ -2
USP54-217ENST00000498213 CSN1S1P47710 185 aa2.55□□□□□ -2
USP54-217ENST00000498213 CAMLGP49069 296 aa2.55□□□□□ -2
USP54-217ENST00000498213 SULT1A2P50226 295 aa2.55□□□□□ -2
USP54-217ENST00000498213 FGF8P55075 233 aaPredicted RBP2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms