RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 ISOC2Q96AB3 205 aa12.6□□□□□ -0.39
PRKCB-209ENST00000498058 OSTCQ9NRP0 149 aa12.6□□□□□ -0.39
PRKCB-209ENST00000498058 HHLA3Q9XRX5 114 aa12.6□□□□□ -0.39
PRKCB-209ENST00000498058 M0R036 132 aa12.59□□□□□ -0.39
PRKCB-209ENST00000498058 GATCO43716 136 aaKnown RBP12.59□□□□□ -0.39
PRKCB-209ENST00000498058 DNAH10OSP0CZ25 163 aa12.59□□□□□ -0.39
PRKCB-209ENST00000498058 ADCYAP1P18509 176 aa12.59□□□□□ -0.39
PRKCB-209ENST00000498058 ZNF415Q09FC8 603 aa12.59□□□□□ -0.39
PRKCB-209ENST00000498058 C10orf91Q5T1B1 145 aa12.59□□□□□ -0.39
PRKCB-209ENST00000498058 NUDT10Q8NFP7 164 aa12.59□□□□□ -0.39
PRKCB-209ENST00000498058 OR2D3Q8NGH3 330 aa12.59□□□□□ -0.39
PRKCB-209ENST00000498058 NUDT11Q96G61 164 aa12.59□□□□□ -0.39
PRKCB-209ENST00000498058 SFRP2Q96HF1 295 aa12.59□□□□□ -0.39
PRKCB-209ENST00000498058 ZNF479Q96JC4 524 aa12.59□□□□□ -0.39
PRKCB-209ENST00000498058 RPP21Q9H633 154 aaKnown RBP12.59□□□□□ -0.39
PRKCB-209ENST00000498058 C11orf21Q9P2W6 132 aa12.59□□□□□ -0.39
PRKCB-209ENST00000498058 CARHSP1Q9Y2V2 147 aaKnown RBP12.59□□□□□ -0.39
PRKCB-209ENST00000498058 CXCL1P09341 107 aa12.58□□□□□ -0.4
PRKCB-209ENST00000498058 S100A4P26447 101 aaKnown RBP12.58□□□□□ -0.4
PRKCB-209ENST00000498058 ASIPP42127 132 aa12.58□□□□□ -0.4
PRKCB-209ENST00000498058 XGP55808 180 aa12.58□□□□□ -0.4
PRKCB-209ENST00000498058 RNASE7Q9H1E1 156 aaKnown RBP12.58□□□□□ -0.4
PRKCB-209ENST00000498058 IGKV3D-20A0A0C4DH25 116 aa12.57□□□□□ -0.4
PRKCB-209ENST00000498058 PPP1R2P9O14990 202 aa12.57□□□□□ -0.4
PRKCB-209ENST00000498058 TYMSP04818 313 aa12.57□□□□□ -0.4
PRKCB-209ENST00000498058 MRPL23Q16540 153 aaKnown RBP12.57□□□□□ -0.4
PRKCB-209ENST00000498058 CT83Q5H943 113 aa12.57□□□□□ -0.4
PRKCB-209ENST00000498058 WFDC10BQ8IUB3 73 aa12.57□□□□□ -0.4
PRKCB-209ENST00000498058 OR10G8Q8NGN5 311 aa12.57□□□□□ -0.4
PRKCB-209ENST00000498058 HERC1Q15751 4861 aa12.56□□□□□ -0.4
PRKCB-209ENST00000498058 TMSB15BA0A087X1C1 80 aa12.56□□□□□ -0.4
PRKCB-209ENST00000498058 K7EQD1 137 aa12.56□□□□□ -0.4
PRKCB-209ENST00000498058 MT-ND4LP03901 98 aa12.56□□□□□ -0.4
PRKCB-209ENST00000498058 NEGR1Q7Z3B1 354 aa12.56□□□□□ -0.4
PRKCB-209ENST00000498058 PGPEP1Q9NXJ5 209 aa12.56□□□□□ -0.4
PRKCB-209ENST00000498058 TRGV4A0A0C4DH28 118 aa12.55□□□□□ -0.4
PRKCB-209ENST00000498058 IGHV3-16A0A0C4DH30 117 aa12.55□□□□□ -0.4
PRKCB-209ENST00000498058 A8MWL6 223 aa12.55□□□□□ -0.4
PRKCB-209ENST00000498058 GNRH2O43555 120 aa12.55□□□□□ -0.4
PRKCB-209ENST00000498058 KRTAP10-1P60331 282 aa12.55□□□□□ -0.4
PRKCB-209ENST00000498058 SLAQ13239 276 aa12.55□□□□□ -0.4
PRKCB-209ENST00000498058 DNLZQ5SXM8 178 aa12.55□□□□□ -0.4
PRKCB-209ENST00000498058 SVBPQ8N300 66 aa12.55□□□□□ -0.4
PRKCB-209ENST00000498058 RASL10AQ92737 203 aa12.55□□□□□ -0.4
PRKCB-209ENST00000498058 SPXQ9BT56 116 aa12.55□□□□□ -0.4
PRKCB-209ENST00000498058 A0A087WTM6 91 aa12.54□□□□□ -0.4
PRKCB-209ENST00000498058 APOC3P02656 99 aa12.54□□□□□ -0.4
PRKCB-209ENST00000498058 RPL19P84098 196 aaKnown RBP12.54□□□□□ -0.4
PRKCB-209ENST00000498058 ANAPC16Q96DE5 110 aa12.54□□□□□ -0.4
PRKCB-209ENST00000498058 VPS13BQ7Z7G8 4022 aa12.53□□□□□ -0.4
PRKCB-209ENST00000498058 LOC100131303A0A0U1RQF7 123 aa12.53□□□□□ -0.4
PRKCB-209ENST00000498058 GRIFINA4D1Z8 144 aa12.53□□□□□ -0.4
PRKCB-209ENST00000498058 SNAPINO95295 136 aa12.53□□□□□ -0.4
PRKCB-209ENST00000498058 GYPEP15421 78 aa12.53□□□□□ -0.4
PRKCB-209ENST00000498058 IL36BQ9NZH7 164 aa12.53□□□□□ -0.4
PRKCB-209ENST00000498058 RHEBQ15382 184 aa12.52□□□□□ -0.41
PRKCB-209ENST00000498058 GFRA4Q9GZZ7 299 aa12.52□□□□□ -0.41
PRKCB-209ENST00000498058 V9GYV3 84 aa12.52□□□□□ -0.41
PRKCB-209ENST00000498058 FAM231BA6NCW3 169 aa12.51□□□□□ -0.41
PRKCB-209ENST00000498058 EPM2AB3EWF7 344 aa12.51□□□□□ -0.41
PRKCB-209ENST00000498058 H3BVH4 76 aa12.51□□□□□ -0.41
PRKCB-209ENST00000498058 SRIP30626 198 aa12.51□□□□□ -0.41
PRKCB-209ENST00000498058 FER1L6-AS1Q8NA97 138 aa12.51□□□□□ -0.41
PRKCB-209ENST00000498058 TSKUQ8WUA8 353 aa12.51□□□□□ -0.41
PRKCB-209ENST00000498058 CTDSP1Q9GZU7 261 aa12.51□□□□□ -0.41
PRKCB-209ENST00000498058 PHLDA3Q9Y5J5 127 aa12.51□□□□□ -0.41
PRKCB-209ENST00000498058 F2Z2F3 143 aa12.5□□□□□ -0.41
PRKCB-209ENST00000498058 ARMS2P0C7Q2 107 aa12.5□□□□□ -0.41
PRKCB-209ENST00000498058 CDPF1Q6NVV7 123 aa12.5□□□□□ -0.41
PRKCB-209ENST00000498058 SYT8Q8NBV8 401 aa12.5□□□□□ -0.41
PRKCB-209ENST00000498058 CLRN3Q8NCR9 226 aa12.5□□□□□ -0.41
PRKCB-209ENST00000498058 C9orf85Q96MD7 179 aa12.5□□□□□ -0.41
PRKCB-209ENST00000498058 MSRB1Q9NZV6 116 aa12.5□□□□□ -0.41
PRKCB-209ENST00000498058 TRAV4A0A0B4J268 109 aa12.49□□□□□ -0.41
PRKCB-209ENST00000498058 M0R2P5 195 aa12.49□□□□□ -0.41
PRKCB-209ENST00000498058 OR5AL1P0C617 328 aa12.49□□□□□ -0.41
PRKCB-209ENST00000498058 RNASE3P12724 160 aaKnown RBP12.49□□□□□ -0.41
PRKCB-209ENST00000498058 NFE4Q86UQ8 179 aa12.49□□□□□ -0.41
PRKCB-209ENST00000498058 BORCS7Q96B45 105 aa12.49□□□□□ -0.41
PRKCB-209ENST00000498058 TPPP3Q9BW30 176 aa12.49□□□□□ -0.41
PRKCB-209ENST00000498058 EREGO14944 169 aa12.48□□□□□ -0.41
PRKCB-209ENST00000498058 IGLC6P0CF74 106 aa12.48□□□□□ -0.41
PRKCB-209ENST00000498058 GZMBP10144 247 aa12.48□□□□□ -0.41
PRKCB-209ENST00000498058 ZFP82Q8N141 532 aa12.48□□□□□ -0.41
PRKCB-209ENST00000498058 PTH2Q96A98 100 aa12.48□□□□□ -0.41
PRKCB-209ENST00000498058 TRAV9-2A0A087WT02 112 aa12.47□□□□□ -0.41
PRKCB-209ENST00000498058 A0A087WWC5 75 aa12.47□□□□□ -0.41
PRKCB-209ENST00000498058 C7orf77A4D0Y5 90 aa12.47□□□□□ -0.41
PRKCB-209ENST00000498058 SNAI2O43623 268 aa12.47□□□□□ -0.41
PRKCB-209ENST00000498058 CACNG7P62955 275 aa12.47□□□□□ -0.41
PRKCB-209ENST00000498058 PIK3CD-AS1Q5SR53 167 aa12.47□□□□□ -0.41
PRKCB-209ENST00000498058 SSBP4Q9BWG4 385 aaPredicted RBP12.47□□□□□ -0.41
PRKCB-209ENST00000498058 NAT8BQ9UHF3 227 aa12.47□□□□□ -0.41
PRKCB-209ENST00000498058 CTRLP40313 264 aa12.46□□□□□ -0.41
PRKCB-209ENST00000498058 FOXA3P55318 350 aaPredicted RBP12.46□□□□□ -0.41
PRKCB-209ENST00000498058 ZNF876PQ49A33 203 aa12.46□□□□□ -0.41
PRKCB-209ENST00000498058 SPANXN1Q5VSR9 72 aa12.46□□□□□ -0.41
PRKCB-209ENST00000498058 WDR73Q6P4I2 378 aa12.46□□□□□ -0.41
PRKCB-209ENST00000498058 OR4C5Q8NGB2 326 aa12.46□□□□□ -0.41
PRKCB-209ENST00000498058 RPS10P5Q9NQ39 176 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms