RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 MRPL23Q16540 153 aaKnown RBP10.59□□□□□ -0.71
NUP50-219ENST00000497960 ZNF575Q86XF7 245 aa10.59□□□□□ -0.71
NUP50-219ENST00000497960 OR10AG1Q8NH19 301 aa10.59□□□□□ -0.71
NUP50-219ENST00000497960 SCRT2Q9NQ03 307 aa10.59□□□□□ -0.71
NUP50-219ENST00000497960 OSTCQ9NRP0 149 aa10.59□□□□□ -0.71
NUP50-219ENST00000497960 TMEM218A2RU14 115 aa10.58□□□□□ -0.72
NUP50-219ENST00000497960 OR5AL1P0C617 328 aa10.58□□□□□ -0.72
NUP50-219ENST00000497960 IGLC6P0CF74 106 aa10.58□□□□□ -0.72
NUP50-219ENST00000497960 ADCYAP1P18509 176 aa10.58□□□□□ -0.72
NUP50-219ENST00000497960 PNRC1Q12796 327 aaPredicted RBP10.58□□□□□ -0.72
NUP50-219ENST00000497960 CT83Q5H943 113 aa10.58□□□□□ -0.72
NUP50-219ENST00000497960 SPANXN1Q5VSR9 72 aa10.58□□□□□ -0.72
NUP50-219ENST00000497960 OR4C5Q8NGB2 326 aa10.58□□□□□ -0.72
NUP50-219ENST00000497960 PTH2Q96A98 100 aa10.58□□□□□ -0.72
NUP50-219ENST00000497960 ZNF479Q96JC4 524 aa10.58□□□□□ -0.72
NUP50-219ENST00000497960 MUC21A0A0G2JKD1 596 aa10.57□□□□□ -0.72
NUP50-219ENST00000497960 MUC21A0A140T8X8 626 aa10.57□□□□□ -0.72
NUP50-219ENST00000497960 A0A1W2PPQ1 181 aa10.57□□□□□ -0.72
NUP50-219ENST00000497960 A8MWL6 223 aa10.57□□□□□ -0.72
NUP50-219ENST00000497960 DMRTA1Q5VZB9 504 aa10.57□□□□□ -0.72
NUP50-219ENST00000497960 OR10G8Q8NGN5 311 aa10.57□□□□□ -0.72
NUP50-219ENST00000497960 A8MWV9 139 aa10.56□□□□□ -0.72
NUP50-219ENST00000497960 RS1O15537 224 aa10.56□□□□□ -0.72
NUP50-219ENST00000497960 SSTP61278 116 aa10.56□□□□□ -0.72
NUP50-219ENST00000497960 PIK3CD-AS1Q5SR53 167 aa10.56□□□□□ -0.72
NUP50-219ENST00000497960 SSBP4Q9BWG4 385 aaPredicted RBP10.56□□□□□ -0.72
NUP50-219ENST00000497960 SEC11CQ9BY50 192 aa10.56□□□□□ -0.72
NUP50-219ENST00000497960 V9GYV3 84 aa10.56□□□□□ -0.72
NUP50-219ENST00000497960 F2Z2F3 143 aa10.55□□□□□ -0.72
NUP50-219ENST00000497960 NXPH4O95158 308 aa10.55□□□□□ -0.72
NUP50-219ENST00000497960 SRIP30626 198 aa10.55□□□□□ -0.72
NUP50-219ENST00000497960 CTRLP40313 264 aa10.55□□□□□ -0.72
NUP50-219ENST00000497960 CACNG7P62955 275 aa10.55□□□□□ -0.72
NUP50-219ENST00000497960 CFAP126Q5VTH2 177 aa10.55□□□□□ -0.72
NUP50-219ENST00000497960 LYZL1Q6UWQ5 148 aa10.55□□□□□ -0.72
NUP50-219ENST00000497960 NEGR1Q7Z3B1 354 aa10.55□□□□□ -0.72
NUP50-219ENST00000497960 IGHV3-73A0A0B4J1V6 119 aa10.54□□□□□ -0.72
NUP50-219ENST00000497960 SIVA1O15304 175 aa10.54□□□□□ -0.72
NUP50-219ENST00000497960 GYPEP15421 78 aa10.54□□□□□ -0.72
NUP50-219ENST00000497960 FAM74A4Q5TZK3 123 aa10.54□□□□□ -0.72
NUP50-219ENST00000497960 TSKUQ8WUA8 353 aa10.54□□□□□ -0.72
NUP50-219ENST00000497960 BORCS7Q96B45 105 aa10.54□□□□□ -0.72
NUP50-219ENST00000497960 AP1S3Q96PC3 154 aa10.54□□□□□ -0.72
NUP50-219ENST00000497960 JPT2Q9H910 190 aa10.54□□□□□ -0.72
NUP50-219ENST00000497960 K7EQD1 137 aa10.53□□□□□ -0.72
NUP50-219ENST00000497960 RHODO00212 210 aa10.53□□□□□ -0.72
NUP50-219ENST00000497960 PPP1R2P9O14990 202 aa10.53□□□□□ -0.72
NUP50-219ENST00000497960 TNP2Q05952 138 aa10.53□□□□□ -0.72
NUP50-219ENST00000497960 LYPD5Q6UWN5 251 aa10.53□□□□□ -0.72
NUP50-219ENST00000497960 GTSF1Q8WW33 167 aa10.53□□□□□ -0.72
NUP50-219ENST00000497960 PGLYRP4Q96LB8 373 aa10.53□□□□□ -0.72
NUP50-219ENST00000497960 GFRA4Q9GZZ7 299 aa10.53□□□□□ -0.72
NUP50-219ENST00000497960 A0A087WWL8 130 aa10.52□□□□□ -0.73
NUP50-219ENST00000497960 HIGD1CA8MV81 97 aa10.52□□□□□ -0.73
NUP50-219ENST00000497960 CIDEAO60543 219 aa10.52□□□□□ -0.73
NUP50-219ENST00000497960 BTF3P20290 206 aaKnown RBP10.52□□□□□ -0.73
NUP50-219ENST00000497960 KRTAP1-5Q9BYS1 174 aa10.52□□□□□ -0.73
NUP50-219ENST00000497960 HECTD4Q9Y4D8 3996 aa10.52□□□□□ -0.73
NUP50-219ENST00000497960 DNAH2Q9P225 4427 aa10.52□□□□□ -0.73
NUP50-219ENST00000497960 FAT2Q9NYQ8 4349 aa10.51□□□□□ -0.73
NUP50-219ENST00000497960 DNAH17Q9UFH2 4485 aa10.51□□□□□ -0.73
NUP50-219ENST00000497960 TRGC1P0CF51 173 aa10.51□□□□□ -0.73
NUP50-219ENST00000497960 SMIM17P0DL12 118 aa10.51□□□□□ -0.73
NUP50-219ENST00000497960 GATA1P15976 413 aaPredicted RBP10.51□□□□□ -0.73
NUP50-219ENST00000497960 ZFP2Q6ZN57 461 aa10.51□□□□□ -0.73
NUP50-219ENST00000497960 SH2D6Q7Z4S9 175 aa10.51□□□□□ -0.73
NUP50-219ENST00000497960 FAM231BA6NCW3 169 aa10.5□□□□□ -0.73
NUP50-219ENST00000497960 MT-ND4LP03901 98 aa10.5□□□□□ -0.73
NUP50-219ENST00000497960 TWIST1Q15672 202 aa10.5□□□□□ -0.73
NUP50-219ENST00000497960 ZNF56Q15929 161 aa10.5□□□□□ -0.73
NUP50-219ENST00000497960 NDUFA5Q16718 116 aa10.5□□□□□ -0.73
NUP50-219ENST00000497960 ANAPC16Q96DE5 110 aa10.5□□□□□ -0.73
NUP50-219ENST00000497960 CNFNQ9BYD5 112 aa10.5□□□□□ -0.73
NUP50-219ENST00000497960 SAMD10Q9BYL1 202 aa10.5□□□□□ -0.73
NUP50-219ENST00000497960 NAT8BQ9UHF3 227 aa10.5□□□□□ -0.73
NUP50-219ENST00000497960 CARHSP1Q9Y2V2 147 aaKnown RBP10.5□□□□□ -0.73
NUP50-219ENST00000497960 MGPP08493 103 aa10.49□□□□□ -0.73
NUP50-219ENST00000497960 NTF3P20783 257 aa10.49□□□□□ -0.73
NUP50-219ENST00000497960 RHOHQ15669 191 aa10.49□□□□□ -0.73
NUP50-219ENST00000497960 WDR73Q6P4I2 378 aa10.49□□□□□ -0.73
NUP50-219ENST00000497960 C14orf178Q8N769 122 aaPredicted RBP10.49□□□□□ -0.73
NUP50-219ENST00000497960 PRADC1Q9BSG0 188 aa10.49□□□□□ -0.73
NUP50-219ENST00000497960 TRAV9-2A0A087WT02 112 aa10.48□□□□□ -0.73
NUP50-219ENST00000497960 SMIM27A0A1W2PRY6 76 aa10.48□□□□□ -0.73
NUP50-219ENST00000497960 FOXA3P55318 350 aaPredicted RBP10.48□□□□□ -0.73
NUP50-219ENST00000497960 C10orf91Q5T1B1 145 aa10.48□□□□□ -0.73
NUP50-219ENST00000497960 UFSP1Q6NVU6 142 aa10.48□□□□□ -0.73
NUP50-219ENST00000497960 SMIM15Q7Z3B0 74 aa10.48□□□□□ -0.73
NUP50-219ENST00000497960 MSRB1Q9NZV6 116 aa10.48□□□□□ -0.73
NUP50-219ENST00000497960 LOC100131303A0A0U1RQF7 123 aa10.47□□□□□ -0.73
NUP50-219ENST00000497960 A0A1B0GUT8 65 aa10.47□□□□□ -0.73
NUP50-219ENST00000497960 TRBV6-4A0A1B0GX49 114 aa10.47□□□□□ -0.73
NUP50-219ENST00000497960 CRYGDP07320 174 aa10.47□□□□□ -0.73
NUP50-219ENST00000497960 LINC00315P59091 139 aa10.47□□□□□ -0.73
NUP50-219ENST00000497960 SLC25A29Q8N8R3 303 aa10.47□□□□□ -0.73
NUP50-219ENST00000497960 NUP35Q8NFH5 326 aa10.47□□□□□ -0.73
NUP50-219ENST00000497960 APOC3P02656 99 aa10.46□□□□□ -0.73
NUP50-219ENST00000497960 RIGQ13278 110 aa10.46□□□□□ -0.73
NUP50-219ENST00000497960 SLC7A5P1Q8MH63 180 aa10.46□□□□□ -0.73
NUP50-219ENST00000497960 DPH3P1Q9H4G8 78 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms