RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 COX19Q49B96 90 aa13.96□□□□□ -0.17
SCAMP3-209ENST00000497470 WWC2-AS2Q96NR7 200 aa13.96□□□□□ -0.17
SCAMP3-209ENST00000497470 TMEM191AQ9H0A3 160 aa13.96□□□□□ -0.17
SCAMP3-209ENST00000497470 KIF25-AS1Q9Y6Z4 181 aa13.96□□□□□ -0.17
SCAMP3-209ENST00000497470 FAM3BP58499 235 aaPredicted RBP13.94□□□□□ -0.18
SCAMP3-209ENST00000497470 HBBP68871 147 aa13.94□□□□□ -0.18
SCAMP3-209ENST00000497470 DPH3P1Q9H4G8 78 aa13.94□□□□□ -0.18
SCAMP3-209ENST00000497470 SMCO4Q9NRQ5 59 aa13.94□□□□□ -0.18
SCAMP3-209ENST00000497470 TRBV24-1A0A075B6N3 115 aa13.93□□□□□ -0.18
SCAMP3-209ENST00000497470 TRBV6-4A0A1B0GX49 114 aa13.93□□□□□ -0.18
SCAMP3-209ENST00000497470 ATP6V1G1O75348 118 aa13.93□□□□□ -0.18
SCAMP3-209ENST00000497470 SMIM17P0DL12 118 aa13.93□□□□□ -0.18
SCAMP3-209ENST00000497470 NANOS2P60321 138 aaKnown RBP13.93□□□□□ -0.18
SCAMP3-209ENST00000497470 Q6ZTC4 211 aa13.93□□□□□ -0.18
SCAMP3-209ENST00000497470 HUWE1Q7Z6Z7 4374 aaKnown RBP13.92□□□□□ -0.18
SCAMP3-209ENST00000497470 LINC00315P59091 139 aa13.92□□□□□ -0.18
SCAMP3-209ENST00000497470 RAB4BP61018 213 aa13.92□□□□□ -0.18
SCAMP3-209ENST00000497470 FHL2Q14192 279 aa13.92□□□□□ -0.18
SCAMP3-209ENST00000497470 ATRAIDQ6UW56 229 aa13.92□□□□□ -0.18
SCAMP3-209ENST00000497470 ZNF479Q96JC4 524 aa13.92□□□□□ -0.18
SCAMP3-209ENST00000497470 MSRB1Q9NZV6 116 aa13.92□□□□□ -0.18
SCAMP3-209ENST00000497470 PRO0255Q9UI72 69 aa13.92□□□□□ -0.18
SCAMP3-209ENST00000497470 IGHV3-53P01767 116 aa13.91□□□□□ -0.18
SCAMP3-209ENST00000497470 GATA1P15976 413 aaPredicted RBP13.91□□□□□ -0.18
SCAMP3-209ENST00000497470 EVI2AP22794 236 aa13.91□□□□□ -0.18
SCAMP3-209ENST00000497470 TCTAP57738 103 aa13.91□□□□□ -0.18
SCAMP3-209ENST00000497470 DEFB131BA0A096LNP1 70 aa13.9□□□□□ -0.18
SCAMP3-209ENST00000497470 C14orf178Q8N769 122 aaPredicted RBP13.9□□□□□ -0.18
SCAMP3-209ENST00000497470 JPT2Q9H910 190 aa13.9□□□□□ -0.18
SCAMP3-209ENST00000497470 TRGV4A0A0C4DH28 118 aa13.89□□□□□ -0.19
SCAMP3-209ENST00000497470 MUC21A0A0G2JKD1 596 aa13.89□□□□□ -0.19
SCAMP3-209ENST00000497470 TRBV10-1A0A0K0K1A3 114 aa13.89□□□□□ -0.19
SCAMP3-209ENST00000497470 MUC21A0A140T8X8 626 aa13.89□□□□□ -0.19
SCAMP3-209ENST00000497470 NUPR2A6NF83 97 aa13.89□□□□□ -0.19
SCAMP3-209ENST00000497470 ELOBQ15370 118 aa13.89□□□□□ -0.19
SCAMP3-209ENST00000497470 PHLDA1Q8WV24 401 aaPredicted RBP13.89□□□□□ -0.19
SCAMP3-209ENST00000497470 YPEL4Q96NS1 127 aa13.89□□□□□ -0.19
SCAMP3-209ENST00000497470 SAMD10Q9BYL1 202 aa13.89□□□□□ -0.19
SCAMP3-209ENST00000497470 HHLA3Q9XRX5 114 aa13.89□□□□□ -0.19
SCAMP3-209ENST00000497470 NACAE9PAV3 2078 aa13.89□□□□□ -0.19
SCAMP3-209ENST00000497470 H7C1H1 209 aa13.88□□□□□ -0.19
SCAMP3-209ENST00000497470 GNB1LQ9BYB4 327 aa13.88□□□□□ -0.19
SCAMP3-209ENST00000497470 MT-ND6P03923 174 aa13.87□□□□□ -0.19
SCAMP3-209ENST00000497470 HOXA5P20719 270 aa13.87□□□□□ -0.19
SCAMP3-209ENST00000497470 CRYBA4P53673 196 aa13.87□□□□□ -0.19
SCAMP3-209ENST00000497470 RHOHQ15669 191 aa13.87□□□□□ -0.19
SCAMP3-209ENST00000497470 FAM104BQ5XKR9 115 aa13.87□□□□□ -0.19
SCAMP3-209ENST00000497470 MRPL54Q6P161 138 aaKnown RBP13.87□□□□□ -0.19
SCAMP3-209ENST00000497470 CEMP1Q6PRD7 247 aaPredicted RBP13.87□□□□□ -0.19
SCAMP3-209ENST00000497470 MUC7Q8TAX7 377 aa13.87□□□□□ -0.19
SCAMP3-209ENST00000497470 F5H768 121 aa13.86□□□□□ -0.19
SCAMP3-209ENST00000497470 PPP1R17O96001 155 aa13.86□□□□□ -0.19
SCAMP3-209ENST00000497470 C15orf53Q8NAA6 179 aa13.86□□□□□ -0.19
SCAMP3-209ENST00000497470 MRAP2Q96G30 205 aa13.86□□□□□ -0.19
SCAMP3-209ENST00000497470 KLK5Q9Y337 293 aaPredicted RBP13.86□□□□□ -0.19
SCAMP3-209ENST00000497470 URGCP-MRPS24S4R325 110 aa13.86□□□□□ -0.19
SCAMP3-209ENST00000497470 A0A087WWL8 130 aa13.85□□□□□ -0.19
SCAMP3-209ENST00000497470 HLA-DQA1P01909 254 aa13.85□□□□□ -0.19
SCAMP3-209ENST00000497470 PPBPP02775 128 aa13.85□□□□□ -0.19
SCAMP3-209ENST00000497470 RAB4AP20338 218 aa13.85□□□□□ -0.19
SCAMP3-209ENST00000497470 CAMPP49913 170 aa13.85□□□□□ -0.19
SCAMP3-209ENST00000497470 FAM74A4Q5TZK3 123 aa13.85□□□□□ -0.19
SCAMP3-209ENST00000497470 SH2D6Q7Z4S9 175 aa13.85□□□□□ -0.19
SCAMP3-209ENST00000497470 PRADC1Q9BSG0 188 aa13.85□□□□□ -0.19
SCAMP3-209ENST00000497470 C3orf84H3BNL1 204 aa13.84□□□□□ -0.19
SCAMP3-209ENST00000497470 SLC25A29Q8N8R3 303 aa13.84□□□□□ -0.19
SCAMP3-209ENST00000497470 DNAJC30Q96LL9 226 aa13.84□□□□□ -0.19
SCAMP3-209ENST00000497470 K7EQD1 137 aa13.83□□□□□ -0.2
SCAMP3-209ENST00000497470 M0QY20 66 aa13.83□□□□□ -0.2
SCAMP3-209ENST00000497470 PAX4O43316 350 aa13.83□□□□□ -0.2
SCAMP3-209ENST00000497470 SSTP61278 116 aa13.83□□□□□ -0.2
SCAMP3-209ENST00000497470 RNF185Q96GF1 192 aa13.83□□□□□ -0.2
SCAMP3-209ENST00000497470 TRAV26-1A0A087WT03 109 aa13.82□□□□□ -0.2
SCAMP3-209ENST00000497470 ZNF56Q15929 161 aa13.82□□□□□ -0.2
SCAMP3-209ENST00000497470 TMEM136Q6ZRR5 245 aa13.82□□□□□ -0.2
SCAMP3-209ENST00000497470 VSIG2Q96IQ7 327 aa13.82□□□□□ -0.2
SCAMP3-209ENST00000497470 F5H697 171 aa13.81□□□□□ -0.2
SCAMP3-209ENST00000497470 PHOX2AO14813 284 aa13.81□□□□□ -0.2
SCAMP3-209ENST00000497470 MRPL23Q16540 153 aaKnown RBP13.81□□□□□ -0.2
SCAMP3-209ENST00000497470 AMN1Q8IY45 258 aa13.81□□□□□ -0.2
SCAMP3-209ENST00000497470 LAMTOR2Q9Y2Q5 125 aa13.81□□□□□ -0.2
SCAMP3-209ENST00000497470 TRBV6-5A0A0K0K1A5 114 aa13.8□□□□□ -0.2
SCAMP3-209ENST00000497470 HTN3P15516 51 aa13.8□□□□□ -0.2
SCAMP3-209ENST00000497470 SUMO4Q6EEV6 95 aa13.8□□□□□ -0.2
SCAMP3-209ENST00000497470 TMEM88Q6PEY1 159 aa13.8□□□□□ -0.2
SCAMP3-209ENST00000497470 Q6ZSN1 163 aa13.8□□□□□ -0.2
SCAMP3-209ENST00000497470 CBLN2Q8IUK8 224 aa13.8□□□□□ -0.2
SCAMP3-209ENST00000497470 NIT2Q9NQR4 276 aa13.8□□□□□ -0.2
SCAMP3-209ENST00000497470 IGHV3-73A0A0B4J1V6 119 aa13.79□□□□□ -0.2
SCAMP3-209ENST00000497470 MGPP08493 103 aa13.79□□□□□ -0.2
SCAMP3-209ENST00000497470 TGP01266 2768 aa13.78□□□□□ -0.2
SCAMP3-209ENST00000497470 TRBV7-3A0A075B6L6 115 aa13.78□□□□□ -0.2
SCAMP3-209ENST00000497470 TGIF2-C20orf24A0A0A6YYL0 155 aa13.78□□□□□ -0.2
SCAMP3-209ENST00000497470 LINC00694P0DN24 101 aa13.78□□□□□ -0.2
SCAMP3-209ENST00000497470 TIRAPP58753 221 aa13.78□□□□□ -0.2
SCAMP3-209ENST00000497470 RPL36AP83881 106 aaKnown RBP13.78□□□□□ -0.2
SCAMP3-209ENST00000497470 MRPL51Q4U2R6 128 aaKnown RBP13.78□□□□□ -0.2
SCAMP3-209ENST00000497470 RPL36ALQ969Q0 106 aaKnown RBP13.78□□□□□ -0.2
SCAMP3-209ENST00000497470 ICOSQ9Y6W8 199 aa13.78□□□□□ -0.2
SCAMP3-209ENST00000497470 RPL32P62910 135 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms