RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 PRG4Q92954 1404 aaPredicted RBP0.47□□□□□ -2.33
SMC4-225ENST00000497203 BDP1A6H8Y1 2624 aa0.47□□□□□ -2.33
SMC4-225ENST00000497203 K7ERU9 68 aa0.47□□□□□ -2.33
SMC4-225ENST00000497203 SMCO1Q147U7 214 aa0.47□□□□□ -2.33
SMC4-225ENST00000497203 SPCS2Q15005 226 aa0.47□□□□□ -2.33
SMC4-225ENST00000497203 SMIM21Q3B7S5 101 aa0.47□□□□□ -2.33
SMC4-225ENST00000497203 PRR15LQ9BU68 103 aa0.47□□□□□ -2.33
SMC4-225ENST00000497203 NDUFA12Q9UI09 145 aa0.47□□□□□ -2.33
SMC4-225ENST00000497203 CCL3L1P16619 93 aa0.46□□□□□ -2.34
SMC4-225ENST00000497203 FAM74A4Q5TZK3 123 aa0.46□□□□□ -2.34
SMC4-225ENST00000497203 MIC13Q5XKP0 118 aa0.46□□□□□ -2.34
SMC4-225ENST00000497203 VMO1Q7Z5L0 202 aa0.46□□□□□ -2.34
SMC4-225ENST00000497203 PSMG3Q9BT73 122 aaPredicted RBP0.46□□□□□ -2.34
SMC4-225ENST00000497203 BPESC1Q9GZL8 116 aa0.46□□□□□ -2.34
SMC4-225ENST00000497203 JMJD1CQ15652 2540 aa0.45□□□□□ -2.34
SMC4-225ENST00000497203 F5P12259 2224 aa0.45□□□□□ -2.34
SMC4-225ENST00000497203 TRAV12-3A0A0B4J271 114 aa0.45□□□□□ -2.34
SMC4-225ENST00000497203 COX4I1P13073 169 aa0.45□□□□□ -2.34
SMC4-225ENST00000497203 NPC2P61916 151 aa0.45□□□□□ -2.34
SMC4-225ENST00000497203 SCIMPQ6UWF3 145 aa0.45□□□□□ -2.34
SMC4-225ENST00000497203 TSTD1Q8NFU3 115 aa0.45□□□□□ -2.34
SMC4-225ENST00000497203 MDN1Q9NU22 5596 aa0.45□□□□□ -2.34
SMC4-225ENST00000497203 CDK13Q14004 1512 aaKnown RBP0.44□□□□□ -2.34
SMC4-225ENST00000497203 M0R129 80 aa0.44□□□□□ -2.34
SMC4-225ENST00000497203 RRAS2P62070 204 aaPredicted RBP0.44□□□□□ -2.34
SMC4-225ENST00000497203 SLC48A1Q6P1K1 146 aa0.44□□□□□ -2.34
SMC4-225ENST00000497203 C4orf33Q8N1A6 199 aa0.44□□□□□ -2.34
SMC4-225ENST00000497203 TNS1Q9HBL0 1735 aaKnown RBP0.44□□□□□ -2.34
SMC4-225ENST00000497203 NPFFO15130 113 aa0.43□□□□□ -2.34
SMC4-225ENST00000497203 PIRTP0C851 137 aa0.43□□□□□ -2.34
SMC4-225ENST00000497203 RPL7L1Q6DKI1 246 aaKnown RBP0.43□□□□□ -2.34
SMC4-225ENST00000497203 Q6ZUT4 128 aa0.43□□□□□ -2.34
SMC4-225ENST00000497203 C20orf197Q8N268 126 aa0.43□□□□□ -2.34
SMC4-225ENST00000497203 COX7B2Q8TF08 81 aa0.43□□□□□ -2.34
SMC4-225ENST00000497203 PFDN5Q99471 154 aa0.43□□□□□ -2.34
SMC4-225ENST00000497203 PROK2Q9HC23 129 aa0.43□□□□□ -2.34
SMC4-225ENST00000497203 PAIP2BQ9ULR5 123 aaKnown RBP0.43□□□□□ -2.34
SMC4-225ENST00000497203 CACNA1HO95180 2353 aa0.43□□□□□ -2.34
SMC4-225ENST00000497203 ADGRB1O14514 1584 aa0.43□□□□□ -2.34
SMC4-225ENST00000497203 TMEM2Q9UHN6 1383 aa0.43□□□□□ -2.34
SMC4-225ENST00000497203 AKAP11Q9UKA4 1901 aa0.42□□□□□ -2.34
SMC4-225ENST00000497203 LAMB1P07942 1786 aa0.42□□□□□ -2.34
SMC4-225ENST00000497203 KDM6BO15054 1643 aa0.42□□□□□ -2.34
SMC4-225ENST00000497203 A6NIN4 97 aa0.42□□□□□ -2.34
SMC4-225ENST00000497203 PHGR1C9JFL3 82 aa0.42□□□□□ -2.34
SMC4-225ENST00000497203 GUCA1AP43080 201 aaPredicted RBP0.42□□□□□ -2.34
SMC4-225ENST00000497203 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.42□□□□□ -2.34
SMC4-225ENST00000497203 SMIM11BQ8TCY0 68 aa0.42□□□□□ -2.34
SMC4-225ENST00000497203 TCEAL4Q96EI5 215 aa0.42□□□□□ -2.34
SMC4-225ENST00000497203 RPRMQ9NS64 109 aa0.42□□□□□ -2.34
SMC4-225ENST00000497203 V9GYV3 84 aa0.42□□□□□ -2.34
SMC4-225ENST00000497203 PARP14Q460N5 1801 aa0.42□□□□□ -2.34
SMC4-225ENST00000497203 PHIPQ8WWQ0 1821 aa0.42□□□□□ -2.34
SMC4-225ENST00000497203 NRXN2Q9P2S2 1712 aa0.41□□□□□ -2.34
SMC4-225ENST00000497203 CADP27708 2225 aa0.41□□□□□ -2.34
SMC4-225ENST00000497203 A0A087WTM6 91 aa0.41□□□□□ -2.34
SMC4-225ENST00000497203 TRBV7-1A0A0A6YYK4 115 aa0.41□□□□□ -2.34
SMC4-225ENST00000497203 IFNA17P01571 189 aa0.41□□□□□ -2.34
SMC4-225ENST00000497203 PIPP12273 146 aaPredicted RBP0.41□□□□□ -2.34
SMC4-225ENST00000497203 COPZ1P61923 177 aa0.41□□□□□ -2.34
SMC4-225ENST00000497203 RPS25P62851 125 aaKnown RBP0.41□□□□□ -2.34
SMC4-225ENST00000497203 C9orf116Q5BN46 136 aaPredicted RBP0.41□□□□□ -2.34
SMC4-225ENST00000497203 TPT1P8Q9HAU6 139 aa0.41□□□□□ -2.34
SMC4-225ENST00000497203 TMEM242Q9NWH2 141 aa0.41□□□□□ -2.34
SMC4-225ENST00000497203 DOCK11Q5JSL3 2073 aa0.41□□□□□ -2.34
SMC4-225ENST00000497203 LAMC3Q9Y6N6 1575 aa0.4□□□□□ -2.34
SMC4-225ENST00000497203 SOGA1O94964 1423 aa0.4□□□□□ -2.34
SMC4-225ENST00000497203 TPRP12270 2363 aaKnown RBP0.4□□□□□ -2.34
SMC4-225ENST00000497203 DAPK1P53355 1430 aa0.4□□□□□ -2.34
SMC4-225ENST00000497203 GVQW2A0A096LPI5 108 aaPredicted RBP0.4□□□□□ -2.35
SMC4-225ENST00000497203 PITX3O75364 302 aa0.4□□□□□ -2.35
SMC4-225ENST00000497203 APODP05090 189 aa0.4□□□□□ -2.35
SMC4-225ENST00000497203 IL5P05113 134 aa0.39□□□□□ -2.35
SMC4-225ENST00000497203 KCNRGQ8N5I3 272 aa0.39□□□□□ -2.35
SMC4-225ENST00000497203 TMEM191AQ9H0A3 160 aa0.39□□□□□ -2.35
SMC4-225ENST00000497203 SCP2D1Q9UJQ7 156 aa0.39□□□□□ -2.35
SMC4-225ENST00000497203 MUC22E2RYF6 1773 aaPredicted RBP0.39□□□□□ -2.35
SMC4-225ENST00000497203 TTC28Q96AY4 2481 aa0.39□□□□□ -2.35
SMC4-225ENST00000497203 SPTSSAQ969W0 71 aa0.38□□□□□ -2.35
SMC4-225ENST00000497203 PTPRZ1P23471 2315 aaPredicted RBP0.38□□□□□ -2.35
SMC4-225ENST00000497203 NDUFB6O95139 128 aa0.37□□□□□ -2.35
SMC4-225ENST00000497203 UBE2G1P62253 170 aa0.37□□□□□ -2.35
SMC4-225ENST00000497203 Q96NJ1 140 aa0.37□□□□□ -2.35
SMC4-225ENST00000497203 CCDC167Q9P0B6 97 aa0.37□□□□□ -2.35
SMC4-225ENST00000497203 ABCA12Q86UK0 2595 aa0.36□□□□□ -2.35
SMC4-225ENST00000497203 SNCGO76070 127 aa0.36□□□□□ -2.35
SMC4-225ENST00000497203 ACYP2P14621 99 aa0.36□□□□□ -2.35
SMC4-225ENST00000497203 CBLN1P23435 193 aa0.36□□□□□ -2.35
SMC4-225ENST00000497203 UNC13BO14795 1591 aa0.36□□□□□ -2.35
SMC4-225ENST00000497203 EDDM3BP56851 147 aa0.35□□□□□ -2.35
SMC4-225ENST00000497203 COX6A2Q02221 97 aa0.35□□□□□ -2.35
SMC4-225ENST00000497203 C10orf82Q8WW14 230 aa0.35□□□□□ -2.35
SMC4-225ENST00000497203 ARFGEF1Q9Y6D6 1849 aa0.35□□□□□ -2.35
SMC4-225ENST00000497203 TMEM14DPA8MWL7 114 aa0.34□□□□□ -2.36
SMC4-225ENST00000497203 UBE2D1P51668 147 aa0.34□□□□□ -2.36
SMC4-225ENST00000497203 ZNF818PQ6ZRF7 136 aa0.34□□□□□ -2.36
SMC4-225ENST00000497203 SDF2Q99470 211 aa0.34□□□□□ -2.36
SMC4-225ENST00000497203 GPR98Q8WXG9 6306 aa0.34□□□□□ -2.36
SMC4-225ENST00000497203 KMT2DO14686 5537 aa0.33□□□□□ -2.36
SMC4-225ENST00000497203 IBTKQ9P2D0 1353 aaPredicted RBP0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms