RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 TPT1P13693 172 aaKnown RBP13.1□□□□□ -0.31
COL20A1-208ENST00000496810 C10orf126Q8N4M7 172 aa13.1□□□□□ -0.31
COL20A1-208ENST00000496810 DERL1Q9BUN8 251 aa13.1□□□□□ -0.31
COL20A1-208ENST00000496810 MLST8Q9BVC4 326 aa13.1□□□□□ -0.31
COL20A1-208ENST00000496810 TRAV8-6A0A0B4J262 113 aa13.09□□□□□ -0.31
COL20A1-208ENST00000496810 K7EP13 123 aa13.09□□□□□ -0.31
COL20A1-208ENST00000496810 SYT8Q8NBV8 401 aa13.09□□□□□ -0.31
COL20A1-208ENST00000496810 Q9HAA7 133 aa13.09□□□□□ -0.31
COL20A1-208ENST00000496810 PHLDA3Q9Y5J5 127 aa13.09□□□□□ -0.31
COL20A1-208ENST00000496810 SFRP2Q96HF1 295 aa13.08□□□□□ -0.32
COL20A1-208ENST00000496810 IBA57-AS1B1ANH7 110 aa13.07□□□□□ -0.32
COL20A1-208ENST00000496810 EIF5AP63241 154 aaKnown RBP13.07□□□□□ -0.32
COL20A1-208ENST00000496810 BAGE2Q86Y30 109 aa13.07□□□□□ -0.32
COL20A1-208ENST00000496810 OR10AG1Q8NH19 301 aa13.07□□□□□ -0.32
COL20A1-208ENST00000496810 GNG13Q9P2W3 67 aa13.07□□□□□ -0.32
COL20A1-208ENST00000496810 RHODO00212 210 aa13.06□□□□□ -0.32
COL20A1-208ENST00000496810 RPL35P42766 123 aaKnown RBP13.06□□□□□ -0.32
COL20A1-208ENST00000496810 PRR27Q6MZM9 219 aa13.06□□□□□ -0.32
COL20A1-208ENST00000496810 ZFP82Q8N141 532 aa13.06□□□□□ -0.32
COL20A1-208ENST00000496810 MUC21A0A0G2JKD1 596 aa13.05□□□□□ -0.32
COL20A1-208ENST00000496810 MUC21A0A140T8X8 626 aa13.05□□□□□ -0.32
COL20A1-208ENST00000496810 LRCOL1A6NCL2 159 aa13.05□□□□□ -0.32
COL20A1-208ENST00000496810 EREGO14944 169 aa13.05□□□□□ -0.32
COL20A1-208ENST00000496810 KRTAP10-1P60331 282 aa13.05□□□□□ -0.32
COL20A1-208ENST00000496810 TCTE3Q8IZS6 198 aa13.05□□□□□ -0.32
COL20A1-208ENST00000496810 C11orf52Q96A22 123 aa13.05□□□□□ -0.32
COL20A1-208ENST00000496810 S100A9P06702 114 aaKnown RBP13.04□□□□□ -0.32
COL20A1-208ENST00000496810 PGPEP1Q9NXJ5 209 aa13.04□□□□□ -0.32
COL20A1-208ENST00000496810 TRAV1-1A0A0B4J248 108 aa13.03□□□□□ -0.32
COL20A1-208ENST00000496810 CDPF1Q6NVV7 123 aa13.03□□□□□ -0.32
COL20A1-208ENST00000496810 DAZ4Q86SG3 579 aaKnown RBP13.03□□□□□ -0.32
COL20A1-208ENST00000496810 Q8N1X5 172 aa13.03□□□□□ -0.32
COL20A1-208ENST00000496810 MANBALQ9NQG1 85 aa13.03□□□□□ -0.32
COL20A1-208ENST00000496810 DAZ3Q9NR90 486 aaKnown RBP13.03□□□□□ -0.32
COL20A1-208ENST00000496810 SULT1A2P50226 295 aa13.02□□□□□ -0.33
COL20A1-208ENST00000496810 WFDC2Q14508 124 aa13.02□□□□□ -0.33
COL20A1-208ENST00000496810 CENPWQ5EE01 88 aa13.02□□□□□ -0.33
COL20A1-208ENST00000496810 DNAJC30Q96LL9 226 aa13.02□□□□□ -0.33
COL20A1-208ENST00000496810 PSCAO43653 123 aa13.01□□□□□ -0.33
COL20A1-208ENST00000496810 IGLV2-8P01709 118 aa13.01□□□□□ -0.33
COL20A1-208ENST00000496810 CXCL1P09341 107 aa13.01□□□□□ -0.33
COL20A1-208ENST00000496810 Q6ZNX1 250 aa13.01□□□□□ -0.33
COL20A1-208ENST00000496810 SNAI2O43623 268 aa13□□□□□ -0.33
COL20A1-208ENST00000496810 XGP55808 180 aa13□□□□□ -0.33
COL20A1-208ENST00000496810 SSTP61278 116 aa13□□□□□ -0.33
COL20A1-208ENST00000496810 RAB19A4D1S5 217 aa12.99□□□□□ -0.33
COL20A1-208ENST00000496810 C1QBP02746 253 aa12.99□□□□□ -0.33
COL20A1-208ENST00000496810 GZMBP10144 247 aa12.99□□□□□ -0.33
COL20A1-208ENST00000496810 RAB5CP51148 216 aa12.99□□□□□ -0.33
COL20A1-208ENST00000496810 LAGE3Q14657 143 aa12.99□□□□□ -0.33
COL20A1-208ENST00000496810 SSBP4Q9BWG4 385 aaPredicted RBP12.99□□□□□ -0.33
COL20A1-208ENST00000496810 hCG_2014768A0A024R1R8 64 aa12.98□□□□□ -0.33
COL20A1-208ENST00000496810 TRBV20OR9-2A0A075B6H5 130 aa12.98□□□□□ -0.33
COL20A1-208ENST00000496810 UBE2D3P61077 147 aa12.98□□□□□ -0.33
COL20A1-208ENST00000496810 UBE2D2P62837 147 aa12.98□□□□□ -0.33
COL20A1-208ENST00000496810 HAMPP81172 84 aa12.98□□□□□ -0.33
COL20A1-208ENST00000496810 ZNF56Q15929 161 aa12.98□□□□□ -0.33
COL20A1-208ENST00000496810 VPS13BQ7Z7G8 4022 aa12.97□□□□□ -0.33
COL20A1-208ENST00000496810 RBFOX3A6NFN3 312 aa12.97□□□□□ -0.33
COL20A1-208ENST00000496810 OR5AL1P0C617 328 aa12.97□□□□□ -0.33
COL20A1-208ENST00000496810 MEF2BQ02080 365 aaPredicted RBP12.97□□□□□ -0.33
COL20A1-208ENST00000496810 NIT1Q86X76 327 aa12.97□□□□□ -0.33
COL20A1-208ENST00000496810 A0A087WWC5 75 aa12.96□□□□□ -0.33
COL20A1-208ENST00000496810 TRBV10-1A0A0K0K1A3 114 aa12.96□□□□□ -0.33
COL20A1-208ENST00000496810 LECT2O14960 151 aa12.96□□□□□ -0.33
COL20A1-208ENST00000496810 EIF5AL1Q6IS14 154 aaKnown RBP12.96□□□□□ -0.33
COL20A1-208ENST00000496810 SLC51BQ86UW2 128 aa12.96□□□□□ -0.33
COL20A1-208ENST00000496810 C9orf62Q8N4C0 152 aa12.96□□□□□ -0.33
COL20A1-208ENST00000496810 Q8N814 137 aa12.96□□□□□ -0.33
COL20A1-208ENST00000496810 NEXN-AS1Q8NBZ9 246 aa12.96□□□□□ -0.33
COL20A1-208ENST00000496810 BOLA1Q9Y3E2 137 aa12.96□□□□□ -0.33
COL20A1-208ENST00000496810 TRBV7-3A0A075B6L6 115 aa12.95□□□□□ -0.34
COL20A1-208ENST00000496810 IGLV5-52A0A0A0MRZ9 124 aa12.95□□□□□ -0.34
COL20A1-208ENST00000496810 BCL2P10415 239 aa12.95□□□□□ -0.34
COL20A1-208ENST00000496810 RPL36AP83881 106 aaKnown RBP12.95□□□□□ -0.34
COL20A1-208ENST00000496810 SPANXN1Q5VSR9 72 aa12.95□□□□□ -0.34
COL20A1-208ENST00000496810 OR10G8Q8NGN5 311 aa12.95□□□□□ -0.34
COL20A1-208ENST00000496810 RPL36ALQ969Q0 106 aaKnown RBP12.95□□□□□ -0.34
COL20A1-208ENST00000496810 C19orf71A6NCJ1 209 aa12.94□□□□□ -0.34
COL20A1-208ENST00000496810 IGLC6P0CF74 106 aa12.94□□□□□ -0.34
COL20A1-208ENST00000496810 GCSHP23434 173 aa12.94□□□□□ -0.34
COL20A1-208ENST00000496810 RAB4BP61018 213 aa12.94□□□□□ -0.34
COL20A1-208ENST00000496810 KIF25-AS1Q9Y6Z4 181 aa12.94□□□□□ -0.34
COL20A1-208ENST00000496810 GNG4P50150 75 aa12.93□□□□□ -0.34
COL20A1-208ENST00000496810 OR2D3Q8NGH3 330 aa12.93□□□□□ -0.34
COL20A1-208ENST00000496810 TPPP3Q9BW30 176 aa12.93□□□□□ -0.34
COL20A1-208ENST00000496810 MYCBP2O75592 4640 aa12.92□□□□□ -0.34
COL20A1-208ENST00000496810 TEX46H3BTG2 121 aa12.92□□□□□ -0.34
COL20A1-208ENST00000496810 AKAP14Q86UN6 197 aa12.92□□□□□ -0.34
COL20A1-208ENST00000496810 MED9Q9NWA0 146 aa12.92□□□□□ -0.34
COL20A1-208ENST00000496810 KLK12Q9UKR0 248 aa12.92□□□□□ -0.34
COL20A1-208ENST00000496810 TRAV8-3A0A0A6YYJ7 113 aa12.91□□□□□ -0.34
COL20A1-208ENST00000496810 PDE6DO43924 150 aa12.91□□□□□ -0.34
COL20A1-208ENST00000496810 FER1L6-AS1Q8NA97 138 aa12.91□□□□□ -0.34
COL20A1-208ENST00000496810 AP1S3Q96PC3 154 aa12.91□□□□□ -0.34
COL20A1-208ENST00000496810 F5H697 171 aa12.9□□□□□ -0.34
COL20A1-208ENST00000496810 IFNA1P01562 189 aa12.9□□□□□ -0.34
COL20A1-208ENST00000496810 NTN5Q8WTR8 489 aaPredicted RBP12.9□□□□□ -0.34
COL20A1-208ENST00000496810 VAX2Q9UIW0 290 aa12.9□□□□□ -0.34
COL20A1-208ENST00000496810 URGCP-MRPS24S4R325 110 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms