RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 BLOC1S1P78537 153 aa11.94□□□□□ -0.5
RHBDD3-207ENST00000496342 C19orf71A6NCJ1 209 aa11.93□□□□□ -0.5
RHBDD3-207ENST00000496342 SNAI2O43623 268 aa11.93□□□□□ -0.5
RHBDD3-207ENST00000496342 CXCL1P09341 107 aa11.93□□□□□ -0.5
RHBDD3-207ENST00000496342 LINC00694P0DN24 101 aa11.93□□□□□ -0.5
RHBDD3-207ENST00000496342 MED14OSP0DP75 135 aa11.93□□□□□ -0.5
RHBDD3-207ENST00000496342 LY96Q9Y6Y9 160 aa11.93□□□□□ -0.5
RHBDD3-207ENST00000496342 RBFOX3A6NFN3 312 aa11.92□□□□□ -0.5
RHBDD3-207ENST00000496342 RHODO00212 210 aa11.92□□□□□ -0.5
RHBDD3-207ENST00000496342 OR2D3Q8NGH3 330 aa11.92□□□□□ -0.5
RHBDD3-207ENST00000496342 ATP6V0E2Q8NHE4 81 aa11.92□□□□□ -0.5
RHBDD3-207ENST00000496342 LYPD6BQ8NI32 183 aa11.92□□□□□ -0.5
RHBDD3-207ENST00000496342 TOR2AQ5JU69 321 aa11.91□□□□□ -0.5
RHBDD3-207ENST00000496342 Q6ZRN7 208 aaPredicted RBP11.91□□□□□ -0.5
RHBDD3-207ENST00000496342 SH2D6Q7Z4S9 175 aa11.91□□□□□ -0.5
RHBDD3-207ENST00000496342 Q8N3U1 123 aa11.91□□□□□ -0.5
RHBDD3-207ENST00000496342 SSBP4Q9BWG4 385 aaPredicted RBP11.91□□□□□ -0.5
RHBDD3-207ENST00000496342 K7EN84 100 aa11.9□□□□□ -0.5
RHBDD3-207ENST00000496342 OR5AL1P0C617 328 aa11.9□□□□□ -0.5
RHBDD3-207ENST00000496342 DNAH10OSP0CZ25 163 aa11.9□□□□□ -0.5
RHBDD3-207ENST00000496342 TIRAPP58753 221 aa11.9□□□□□ -0.5
RHBDD3-207ENST00000496342 OR10J3Q5JRS4 329 aa11.9□□□□□ -0.5
RHBDD3-207ENST00000496342 SPANXN1Q5VSR9 72 aa11.9□□□□□ -0.5
RHBDD3-207ENST00000496342 DAZAP1Q96EP5 407 aaKnown RBP11.9□□□□□ -0.5
RHBDD3-207ENST00000496342 TPPP3Q9BW30 176 aa11.9□□□□□ -0.5
RHBDD3-207ENST00000496342 IGLC6P0CF74 106 aa11.89□□□□□ -0.51
RHBDD3-207ENST00000496342 TAGLN2P37802 199 aaKnown RBP11.89□□□□□ -0.51
RHBDD3-207ENST00000496342 CEBPGP53567 150 aa11.89□□□□□ -0.51
RHBDD3-207ENST00000496342 GTSF1LQ9H1H1 148 aa11.89□□□□□ -0.51
RHBDD3-207ENST00000496342 PKHD1P08F94 4074 aa11.88□□□□□ -0.51
RHBDD3-207ENST00000496342 P01737 135 aa11.88□□□□□ -0.51
RHBDD3-207ENST00000496342 IGHV3-30P01768 117 aa11.88□□□□□ -0.51
RHBDD3-207ENST00000496342 IGHV3-33P01772 117 aa11.88□□□□□ -0.51
RHBDD3-207ENST00000496342 IGHV3-30-3P0DP02 117 aa11.88□□□□□ -0.51
RHBDD3-207ENST00000496342 IGHV3-30-5P0DP03 117 aa11.88□□□□□ -0.51
RHBDD3-207ENST00000496342 ZNF56Q15929 161 aa11.88□□□□□ -0.51
RHBDD3-207ENST00000496342 LELP1Q5T871 98 aa11.88□□□□□ -0.51
RHBDD3-207ENST00000496342 OCC1Q8TAD7 63 aa11.88□□□□□ -0.51
RHBDD3-207ENST00000496342 SMIM12Q96EX1 92 aa11.88□□□□□ -0.51
RHBDD3-207ENST00000496342 RNASE7Q9H1E1 156 aaKnown RBP11.88□□□□□ -0.51
RHBDD3-207ENST00000496342 MSRB1Q9NZV6 116 aa11.88□□□□□ -0.51
RHBDD3-207ENST00000496342 DNAH11Q96DT5 4516 aa11.87□□□□□ -0.51
RHBDD3-207ENST00000496342 DYNC1H1Q14204 4646 aaKnown RBP11.87□□□□□ -0.51
RHBDD3-207ENST00000496342 IGHV3-38A0A0C4DH36 116 aa11.87□□□□□ -0.51
RHBDD3-207ENST00000496342 EVI2AP22794 236 aa11.87□□□□□ -0.51
RHBDD3-207ENST00000496342 FER1L6-AS1Q8NA97 138 aa11.87□□□□□ -0.51
RHBDD3-207ENST00000496342 NUDT10Q8NFP7 164 aa11.87□□□□□ -0.51
RHBDD3-207ENST00000496342 NUDT11Q96G61 164 aa11.87□□□□□ -0.51
RHBDD3-207ENST00000496342 TRAV8-6A0A0B4J262 113 aa11.86□□□□□ -0.51
RHBDD3-207ENST00000496342 TMEM250H0YL14 139 aa11.85□□□□□ -0.51
RHBDD3-207ENST00000496342 FUSP35637 526 aaKnown RBP eCLIP11.85□□□□□ -0.51
RHBDD3-207ENST00000496342 RPS20P60866 119 aaKnown RBP11.85□□□□□ -0.51
RHBDD3-207ENST00000496342 EIF5A2Q9GZV4 153 aaKnown RBP11.85□□□□□ -0.51
RHBDD3-207ENST00000496342 KIF25-AS1Q9Y6Z4 181 aa11.85□□□□□ -0.51
RHBDD3-207ENST00000496342 KRTAP10-2P60368 255 aa11.84□□□□□ -0.51
RHBDD3-207ENST00000496342 LINC01556Q5JQF7 62 aa11.84□□□□□ -0.51
RHBDD3-207ENST00000496342 LYZL1Q6UWQ5 148 aa11.84□□□□□ -0.51
RHBDD3-207ENST00000496342 SPATA12Q7Z6I5 190 aa11.84□□□□□ -0.51
RHBDD3-207ENST00000496342 NEXN-AS1Q8NBZ9 246 aa11.84□□□□□ -0.51
RHBDD3-207ENST00000496342 FAM210AQ96ND0 272 aa11.84□□□□□ -0.51
RHBDD3-207ENST00000496342 TRAV9-2A0A087WT02 112 aa11.83□□□□□ -0.52
RHBDD3-207ENST00000496342 F5H697 171 aa11.83□□□□□ -0.52
RHBDD3-207ENST00000496342 MGPP08493 103 aa11.83□□□□□ -0.52
RHBDD3-207ENST00000496342 RAB4BP61018 213 aa11.83□□□□□ -0.52
RHBDD3-207ENST00000496342 AP1S3Q96PC3 154 aa11.83□□□□□ -0.52
RHBDD3-207ENST00000496342 RPP21Q9H633 154 aaKnown RBP11.83□□□□□ -0.52
RHBDD3-207ENST00000496342 BIN3Q9NQY0 253 aa11.83□□□□□ -0.52
RHBDD3-207ENST00000496342 SRP19P09132 144 aaKnown RBP11.82□□□□□ -0.52
RHBDD3-207ENST00000496342 BTF3P20290 206 aaKnown RBP11.82□□□□□ -0.52
RHBDD3-207ENST00000496342 UBE2D3P61077 147 aa11.82□□□□□ -0.52
RHBDD3-207ENST00000496342 UBE2D2P62837 147 aa11.82□□□□□ -0.52
RHBDD3-207ENST00000496342 Q9HAA7 133 aa11.82□□□□□ -0.52
RHBDD3-207ENST00000496342 KIAA1109Q2LD37 5005 aa11.82□□□□□ -0.52
RHBDD3-207ENST00000496342 TRBV10-1A0A0K0K1A3 114 aa11.81□□□□□ -0.52
RHBDD3-207ENST00000496342 C16orf90A8MZG2 172 aa11.81□□□□□ -0.52
RHBDD3-207ENST00000496342 RPL36AP83881 106 aaKnown RBP11.81□□□□□ -0.52
RHBDD3-207ENST00000496342 RPL36ALQ969Q0 106 aaKnown RBP11.81□□□□□ -0.52
RHBDD3-207ENST00000496342 TRBV7-3A0A075B6L6 115 aa11.8□□□□□ -0.52
RHBDD3-207ENST00000496342 XKRY2A2RUG3 117 aa11.8□□□□□ -0.52
RHBDD3-207ENST00000496342 SMIM17P0DL12 118 aa11.8□□□□□ -0.52
RHBDD3-207ENST00000496342 CTRLP40313 264 aa11.8□□□□□ -0.52
RHBDD3-207ENST00000496342 CACNG7P62955 275 aa11.8□□□□□ -0.52
RHBDD3-207ENST00000496342 TEX261Q6UWH6 196 aa11.8□□□□□ -0.52
RHBDD3-207ENST00000496342 C10orf126Q8N4M7 172 aa11.8□□□□□ -0.52
RHBDD3-207ENST00000496342 OR10G8Q8NGN5 311 aa11.8□□□□□ -0.52
RHBDD3-207ENST00000496342 SMIM7Q9BQ49 75 aa11.8□□□□□ -0.52
RHBDD3-207ENST00000496342 C9JQL5 133 aa11.79□□□□□ -0.52
RHBDD3-207ENST00000496342 SRSF3P84103 164 aaKnown RBP11.79□□□□□ -0.52
RHBDD3-207ENST00000496342 DAZ4Q86SG3 579 aaKnown RBP11.79□□□□□ -0.52
RHBDD3-207ENST00000496342 GTSF1Q8WW33 167 aa11.79□□□□□ -0.52
RHBDD3-207ENST00000496342 DAZ3Q9NR90 486 aaKnown RBP11.79□□□□□ -0.52
RHBDD3-207ENST00000496342 IBA57-AS1B1ANH7 110 aa11.78□□□□□ -0.52
RHBDD3-207ENST00000496342 GATCO43716 136 aaKnown RBP11.78□□□□□ -0.52
RHBDD3-207ENST00000496342 NTF3P20783 257 aa11.78□□□□□ -0.52
RHBDD3-207ENST00000496342 SUMO4Q6EEV6 95 aa11.78□□□□□ -0.52
RHBDD3-207ENST00000496342 NFE4Q86UQ8 179 aa11.78□□□□□ -0.52
RHBDD3-207ENST00000496342 ZNF727A8MUV8 499 aa11.77□□□□□ -0.53
RHBDD3-207ENST00000496342 F2Z2F3 143 aa11.77□□□□□ -0.53
RHBDD3-207ENST00000496342 K7EP13 123 aa11.77□□□□□ -0.53
RHBDD3-207ENST00000496342 LINC01551Q86U37 167 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms