RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 CFAP161Q6P656 301 aa6.99□□□□□ -1.29
GAPVD1-219ENST00000495955 MSRB1Q9NZV6 116 aa6.99□□□□□ -1.29
GAPVD1-219ENST00000495955 ATMQ13315 3056 aa6.99□□□□□ -1.29
GAPVD1-219ENST00000495955 H3BRM9 83 aa6.99□□□□□ -1.29
GAPVD1-219ENST00000495955 NMUP48645 174 aa6.99□□□□□ -1.29
GAPVD1-219ENST00000495955 TMEM243Q9BU79 118 aa6.99□□□□□ -1.29
GAPVD1-219ENST00000495955 NIT2Q9NQR4 276 aa6.99□□□□□ -1.29
GAPVD1-219ENST00000495955 LYRM9A8MSI8 78 aa6.99□□□□□ -1.29
GAPVD1-219ENST00000495955 ZFAND2AQ8N6M9 145 aa6.99□□□□□ -1.29
GAPVD1-219ENST00000495955 LAMTOR2Q9Y2Q5 125 aa6.99□□□□□ -1.29
GAPVD1-219ENST00000495955 UNC79Q9P2D8 2635 aa6.99□□□□□ -1.29
GAPVD1-219ENST00000495955 LOC400499M0QZD8 3231 aa6.99□□□□□ -1.29
GAPVD1-219ENST00000495955 LGALS3P17931 250 aaKnown RBP6.98□□□□□ -1.29
GAPVD1-219ENST00000495955 DEFB131BA0A096LNP1 70 aa6.98□□□□□ -1.29
GAPVD1-219ENST00000495955 IFITM10A6NMD0 228 aa6.98□□□□□ -1.29
GAPVD1-219ENST00000495955 MRPS12O15235 138 aaKnown RBP6.98□□□□□ -1.29
GAPVD1-219ENST00000495955 ATP6V0E2Q8NHE4 81 aa6.98□□□□□ -1.29
GAPVD1-219ENST00000495955 TRAV13-1A0A0B4J241 112 aa6.98□□□□□ -1.29
GAPVD1-219ENST00000495955 PTTG1IPP53801 180 aa6.98□□□□□ -1.29
GAPVD1-219ENST00000495955 PKIAP61925 76 aa6.98□□□□□ -1.29
GAPVD1-219ENST00000495955 MIEN1Q9BRT3 115 aa6.97□□□□□ -1.29
GAPVD1-219ENST00000495955 PRM2P04554 102 aa6.97□□□□□ -1.29
GAPVD1-219ENST00000495955 KRTAP10-3P60369 221 aa6.97□□□□□ -1.29
GAPVD1-219ENST00000495955 MEIG1Q5JSS6 88 aa6.97□□□□□ -1.29
GAPVD1-219ENST00000495955 SUMO4Q6EEV6 95 aa6.97□□□□□ -1.29
GAPVD1-219ENST00000495955 TEX43Q6ZNM6 134 aa6.97□□□□□ -1.29
GAPVD1-219ENST00000495955 Q6ZQT7 251 aa6.97□□□□□ -1.29
GAPVD1-219ENST00000495955 DSCAML1Q8TD84 2053 aa6.97□□□□□ -1.29
GAPVD1-219ENST00000495955 A0A0J9YWU9 116 aa6.97□□□□□ -1.29
GAPVD1-219ENST00000495955 CHCHD1Q96BP2 118 aaKnown RBP6.97□□□□□ -1.29
GAPVD1-219ENST00000495955 FLNCQ14315 2725 aa6.97□□□□□ -1.29
GAPVD1-219ENST00000495955 TRAV4A0A0B4J268 109 aa6.97□□□□□ -1.29
GAPVD1-219ENST00000495955 TRAV26-1A0A087WT03 109 aa6.97□□□□□ -1.29
GAPVD1-219ENST00000495955 IGHV1-24A0A0C4DH33 117 aa6.97□□□□□ -1.29
GAPVD1-219ENST00000495955 JPT2Q9H910 190 aa6.97□□□□□ -1.29
GAPVD1-219ENST00000495955 ANGP03950 147 aaKnown RBP6.96□□□□□ -1.29
GAPVD1-219ENST00000495955 MED14OSP0DP75 135 aa6.96□□□□□ -1.29
GAPVD1-219ENST00000495955 SS18Q15532 418 aa6.96□□□□□ -1.29
GAPVD1-219ENST00000495955 PRO0255Q9UI72 69 aa6.96□□□□□ -1.29
GAPVD1-219ENST00000495955 LINC00322Q6ZN03 302 aaPredicted RBP6.96□□□□□ -1.3
GAPVD1-219ENST00000495955 SH2D6Q7Z4S9 175 aa6.96□□□□□ -1.3
GAPVD1-219ENST00000495955 GTSF1Q8WW33 167 aa6.96□□□□□ -1.3
GAPVD1-219ENST00000495955 COLCA2A8K830 154 aa6.96□□□□□ -1.3
GAPVD1-219ENST00000495955 LINC01549A6NIU2 74 aa6.96□□□□□ -1.3
GAPVD1-219ENST00000495955 PRR9Q5T870 116 aa6.96□□□□□ -1.3
GAPVD1-219ENST00000495955 LURAP1LQ8IV03 231 aa6.96□□□□□ -1.3
GAPVD1-219ENST00000495955 LINC00469Q8N7U9 141 aa6.96□□□□□ -1.3
GAPVD1-219ENST00000495955 NDUFAF3Q9BU61 184 aa6.96□□□□□ -1.3
GAPVD1-219ENST00000495955 C11orf68Q9H3H3 251 aaKnown RBP6.96□□□□□ -1.3
GAPVD1-219ENST00000495955 SORL1Q92673 2214 aa6.95□□□□□ -1.3
GAPVD1-219ENST00000495955 CLPSL2Q6UWE3 100 aa6.95□□□□□ -1.3
GAPVD1-219ENST00000495955 Q6ZWC4 215 aa6.95□□□□□ -1.3
GAPVD1-219ENST00000495955 MDFIQ99750 246 aa6.95□□□□□ -1.3
GAPVD1-219ENST00000495955 TP53TG1Q9Y2A0 90 aa6.95□□□□□ -1.3
GAPVD1-219ENST00000495955 DCHS1Q96JQ0 3298 aa6.95□□□□□ -1.3
GAPVD1-219ENST00000495955 CR1P17927 2039 aa6.95□□□□□ -1.3
GAPVD1-219ENST00000495955 KALRNO60229 2985 aa6.95□□□□□ -1.3
GAPVD1-219ENST00000495955 C19orf71A6NCJ1 209 aa6.95□□□□□ -1.3
GAPVD1-219ENST00000495955 NPYP01303 97 aa6.95□□□□□ -1.3
GAPVD1-219ENST00000495955 SRSF9Q13242 221 aaKnown RBP eCLIP6.95□□□□□ -1.3
GAPVD1-219ENST00000495955 Q1RN00 199 aa6.95□□□□□ -1.3
GAPVD1-219ENST00000495955 ZFAND6Q6FIF0 208 aa6.95□□□□□ -1.3
GAPVD1-219ENST00000495955 SOCS3O14543 225 aa6.95□□□□□ -1.3
GAPVD1-219ENST00000495955 C10orf91Q5T1B1 145 aa6.95□□□□□ -1.3
GAPVD1-219ENST00000495955 ATOH7Q8N100 152 aa6.95□□□□□ -1.3
GAPVD1-219ENST00000495955 CIDEAO60543 219 aa6.95□□□□□ -1.3
GAPVD1-219ENST00000495955 GATA1P15976 413 aaPredicted RBP6.95□□□□□ -1.3
GAPVD1-219ENST00000495955 RPL39LQ96EH5 51 aaKnown RBP6.95□□□□□ -1.3
GAPVD1-219ENST00000495955 CHTOPQ9Y3Y2 248 aaKnown RBP6.95□□□□□ -1.3
GAPVD1-219ENST00000495955 IGLV2-11P01706 119 aa6.94□□□□□ -1.3
GAPVD1-219ENST00000495955 Q8N8P6 123 aa6.94□□□□□ -1.3
GAPVD1-219ENST00000495955 Q9HAA7 133 aa6.94□□□□□ -1.3
GAPVD1-219ENST00000495955 KLLNB2CW77 178 aa6.94□□□□□ -1.3
GAPVD1-219ENST00000495955 HIST1H2BKO60814 126 aa6.94□□□□□ -1.3
GAPVD1-219ENST00000495955 IGLV2-8P01709 118 aa6.94□□□□□ -1.3
GAPVD1-219ENST00000495955 IGHV3-30P01768 117 aa6.94□□□□□ -1.3
GAPVD1-219ENST00000495955 IGHV3-33P01772 117 aa6.94□□□□□ -1.3
GAPVD1-219ENST00000495955 HIST1H2BJP06899 126 aa6.94□□□□□ -1.3
GAPVD1-219ENST00000495955 IGHV3-30-3P0DP02 117 aa6.94□□□□□ -1.3
GAPVD1-219ENST00000495955 IGHV3-30-5P0DP03 117 aa6.94□□□□□ -1.3
GAPVD1-219ENST00000495955 HIST1H2BOP23527 126 aa6.94□□□□□ -1.3
GAPVD1-219ENST00000495955 HIST1H2BBP33778 126 aa6.94□□□□□ -1.3
GAPVD1-219ENST00000495955 HIST1H2BDP58876 126 aa6.94□□□□□ -1.3
GAPVD1-219ENST00000495955 HIST1H2BCP62807 126 aa6.94□□□□□ -1.3
GAPVD1-219ENST00000495955 HIST2H2BEQ16778 126 aa6.94□□□□□ -1.3
GAPVD1-219ENST00000495955 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.94□□□□□ -1.3
GAPVD1-219ENST00000495955 HIST1H2BHQ93079 126 aa6.94□□□□□ -1.3
GAPVD1-219ENST00000495955 HIST1H2BNQ99877 126 aa6.94□□□□□ -1.3
GAPVD1-219ENST00000495955 HIST1H2BMQ99879 126 aa6.94□□□□□ -1.3
GAPVD1-219ENST00000495955 BEAN1Q3B7T3 259 aa6.94□□□□□ -1.3
GAPVD1-219ENST00000495955 IFI27L1Q96BM0 104 aa6.94□□□□□ -1.3
GAPVD1-219ENST00000495955 ZNF479Q96JC4 524 aa6.94□□□□□ -1.3
GAPVD1-219ENST00000495955 DNAJC30Q96LL9 226 aa6.94□□□□□ -1.3
GAPVD1-219ENST00000495955 PAM16Q9Y3D7 125 aa6.94□□□□□ -1.3
GAPVD1-219ENST00000495955 COL12A1Q99715 3063 aa6.94□□□□□ -1.3
GAPVD1-219ENST00000495955 NANOS2P60321 138 aaKnown RBP6.94□□□□□ -1.3
GAPVD1-219ENST00000495955 LGALS9BQ3B8N2 356 aa6.93□□□□□ -1.3
GAPVD1-219ENST00000495955 SPATA3Q8NHX4 192 aa6.93□□□□□ -1.3
GAPVD1-219ENST00000495955 RMI2Q96E14 147 aa6.93□□□□□ -1.3
GAPVD1-219ENST00000495955 PMCHL2Q9BQD1 86 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms