RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 ZFP69Q49AA0 526 aa8.53□□□□□ -1.04
COL1A1-209ENST00000495677 C5orf17Q8NAS9 161 aa8.53□□□□□ -1.04
COL1A1-209ENST00000495677 TRBV7-3A0A075B6L6 115 aa8.52□□□□□ -1.05
COL1A1-209ENST00000495677 TRBV6-8A0A0A6YYG3 113 aa8.52□□□□□ -1.05
COL1A1-209ENST00000495677 TMEM262E9PQX1 116 aa8.52□□□□□ -1.05
COL1A1-209ENST00000495677 H2BFSP57053 126 aa8.52□□□□□ -1.05
COL1A1-209ENST00000495677 KRTAP10-8P60410 259 aa8.52□□□□□ -1.05
COL1A1-209ENST00000495677 UBE2D3P61077 147 aa8.52□□□□□ -1.05
COL1A1-209ENST00000495677 CNBPP62633 177 aaKnown RBP8.52□□□□□ -1.05
COL1A1-209ENST00000495677 UBE2D2P62837 147 aa8.52□□□□□ -1.05
COL1A1-209ENST00000495677 RPL36AP83881 106 aaKnown RBP8.52□□□□□ -1.05
COL1A1-209ENST00000495677 FLI1Q01543 452 aaPredicted RBP8.52□□□□□ -1.05
COL1A1-209ENST00000495677 SAPCD1Q5SSQ6 148 aa8.52□□□□□ -1.05
COL1A1-209ENST00000495677 KRTAP26-1Q6PEX3 210 aa8.52□□□□□ -1.05
COL1A1-209ENST00000495677 SUN5Q8TC36 379 aa8.52□□□□□ -1.05
COL1A1-209ENST00000495677 RPL36ALQ969Q0 106 aaKnown RBP8.52□□□□□ -1.05
COL1A1-209ENST00000495677 PRR34Q9NV39 138 aa8.52□□□□□ -1.05
COL1A1-209ENST00000495677 A0A087WYN8 130 aa8.51□□□□□ -1.05
COL1A1-209ENST00000495677 A0A1W2PPV4 95 aa8.51□□□□□ -1.05
COL1A1-209ENST00000495677 FABP5P3A8MUU1 101 aa8.51□□□□□ -1.05
COL1A1-209ENST00000495677 H0YIZ8 118 aa8.51□□□□□ -1.05
COL1A1-209ENST00000495677 HLA-DQA1P01909 254 aa8.51□□□□□ -1.05
COL1A1-209ENST00000495677 PKIAP61925 76 aa8.51□□□□□ -1.05
COL1A1-209ENST00000495677 C15orf54Q8N8G6 183 aa8.51□□□□□ -1.05
COL1A1-209ENST00000495677 OR10G8Q8NGN5 311 aa8.51□□□□□ -1.05
COL1A1-209ENST00000495677 MED28Q9H204 178 aa8.51□□□□□ -1.05
COL1A1-209ENST00000495677 A0A0J9YXV3 536 aa8.5□□□□□ -1.05
COL1A1-209ENST00000495677 GAS8-AS1O95177 125 aa8.5□□□□□ -1.05
COL1A1-209ENST00000495677 ANGP03950 147 aaKnown RBP8.5□□□□□ -1.05
COL1A1-209ENST00000495677 MPV17L2Q567V2 206 aa8.5□□□□□ -1.05
COL1A1-209ENST00000495677 SCGB1C1Q8TD33 95 aa8.5□□□□□ -1.05
COL1A1-209ENST00000495677 PPP1R1CQ8WVI7 109 aa8.5□□□□□ -1.05
COL1A1-209ENST00000495677 SFRP2Q96HF1 295 aa8.5□□□□□ -1.05
COL1A1-209ENST00000495677 PLAC8Q9NZF1 115 aa8.5□□□□□ -1.05
COL1A1-209ENST00000495677 EIF3GO75821 320 aaKnown RBP eCLIP8.49□□□□□ -1.05
COL1A1-209ENST00000495677 PET100P0DJ07 73 aa8.49□□□□□ -1.05
COL1A1-209ENST00000495677 CYCSP99999 105 aaKnown RBP8.48□□□□□ -1.05
COL1A1-209ENST00000495677 FAM74A4Q5TZK3 123 aa8.48□□□□□ -1.05
COL1A1-209ENST00000495677 PRNTQ86SH4 94 aa8.48□□□□□ -1.05
COL1A1-209ENST00000495677 SPACA4Q8TDM5 124 aa8.48□□□□□ -1.05
COL1A1-209ENST00000495677 EPDR1Q9UM22 224 aa8.48□□□□□ -1.05
COL1A1-209ENST00000495677 HSPB11Q9Y547 144 aa8.48□□□□□ -1.05
COL1A1-209ENST00000495677 IGHV3-64A0A075B6Q5 118 aa8.47□□□□□ -1.05
COL1A1-209ENST00000495677 PHOX2AO14813 284 aa8.47□□□□□ -1.05
COL1A1-209ENST00000495677 MPC2O95563 127 aa8.47□□□□□ -1.05
COL1A1-209ENST00000495677 ARMS2P0C7Q2 107 aa8.47□□□□□ -1.05
COL1A1-209ENST00000495677 STAG3L2P0CL84 134 aa8.47□□□□□ -1.05
COL1A1-209ENST00000495677 STAG3L3P0CL85 134 aa8.47□□□□□ -1.05
COL1A1-209ENST00000495677 SUMO1P63165 101 aaKnown RBP8.47□□□□□ -1.05
COL1A1-209ENST00000495677 WDR73Q6P4I2 378 aa8.47□□□□□ -1.05
COL1A1-209ENST00000495677 OR11H4Q8NGC9 324 aa8.47□□□□□ -1.05
COL1A1-209ENST00000495677 DPH3Q96FX2 82 aa8.47□□□□□ -1.05
COL1A1-209ENST00000495677 SMIM3Q9BZL3 60 aa8.47□□□□□ -1.05
COL1A1-209ENST00000495677 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.46□□□□□ -1.06
COL1A1-209ENST00000495677 B4DEV8 164 aa8.46□□□□□ -1.06
COL1A1-209ENST00000495677 H3BVH4 76 aa8.46□□□□□ -1.06
COL1A1-209ENST00000495677 ARL14EPLP0DKL9 152 aa8.46□□□□□ -1.06
COL1A1-209ENST00000495677 C7orf33Q8WU49 177 aa8.46□□□□□ -1.06
COL1A1-209ENST00000495677 A0A087WWL8 130 aa8.45□□□□□ -1.06
COL1A1-209ENST00000495677 KRBOX1C9JBD0 128 aa8.45□□□□□ -1.06
COL1A1-209ENST00000495677 ODF1Q14990 250 aa8.45□□□□□ -1.06
COL1A1-209ENST00000495677 TMEM97Q5BJF2 176 aa8.45□□□□□ -1.06
COL1A1-209ENST00000495677 COX8CQ7Z4L0 72 aa8.45□□□□□ -1.06
COL1A1-209ENST00000495677 PHLDA3Q9Y5J5 127 aa8.45□□□□□ -1.06
COL1A1-209ENST00000495677 KIF25-AS1Q9Y6Z4 181 aa8.45□□□□□ -1.06
COL1A1-209ENST00000495677 HMGB3O15347 200 aaKnown RBP8.44□□□□□ -1.06
COL1A1-209ENST00000495677 SLPIP03973 132 aa8.44□□□□□ -1.06
COL1A1-209ENST00000495677 RAB4BP61018 213 aa8.44□□□□□ -1.06
COL1A1-209ENST00000495677 RAB2AP61019 212 aa8.44□□□□□ -1.06
COL1A1-209ENST00000495677 PRR27Q6MZM9 219 aa8.44□□□□□ -1.06
COL1A1-209ENST00000495677 SPINK6Q6UWN8 80 aa8.44□□□□□ -1.06
COL1A1-209ENST00000495677 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.44□□□□□ -1.06
COL1A1-209ENST00000495677 FXYD6-FXYD2A0A087WZ82 144 aa8.43□□□□□ -1.06
COL1A1-209ENST00000495677 TRAV8-4A0A0B4J246 113 aa8.43□□□□□ -1.06
COL1A1-209ENST00000495677 hDV102S1A0JD36 115 aa8.43□□□□□ -1.06
COL1A1-209ENST00000495677 P01737 135 aa8.43□□□□□ -1.06
COL1A1-209ENST00000495677 CHTF8P0CG12 524 aa8.43□□□□□ -1.06
COL1A1-209ENST00000495677 GZMBP10144 247 aa8.43□□□□□ -1.06
COL1A1-209ENST00000495677 TPT1P13693 172 aaKnown RBP8.43□□□□□ -1.06
COL1A1-209ENST00000495677 GCHFRP30047 84 aa8.43□□□□□ -1.06
COL1A1-209ENST00000495677 RPL12P30050 165 aaKnown RBP8.43□□□□□ -1.06
COL1A1-209ENST00000495677 CDC34P49427 236 aaPredicted RBP8.43□□□□□ -1.06
COL1A1-209ENST00000495677 CRIP1P50238 77 aa8.43□□□□□ -1.06
COL1A1-209ENST00000495677 LINC00269Q8N2A0 174 aa8.43□□□□□ -1.06
COL1A1-209ENST00000495677 NEXN-AS1Q8NBZ9 246 aa8.43□□□□□ -1.06
COL1A1-209ENST00000495677 CHCHD5Q9BSY4 110 aa8.43□□□□□ -1.06
COL1A1-209ENST00000495677 AP5S1Q9NUS5 200 aa8.43□□□□□ -1.06
COL1A1-209ENST00000495677 VAX2Q9UIW0 290 aa8.43□□□□□ -1.06
COL1A1-209ENST00000495677 ARL2-SNX15V9GYD0 113 aa8.43□□□□□ -1.06
COL1A1-209ENST00000495677 RBX1P62877 108 aa8.42□□□□□ -1.06
COL1A1-209ENST00000495677 PRR3P79522 188 aaKnown RBP8.42□□□□□ -1.06
COL1A1-209ENST00000495677 REG3GQ6UW15 175 aa8.42□□□□□ -1.06
COL1A1-209ENST00000495677 NTM-AS1Q6ZSK4 140 aa8.42□□□□□ -1.06
COL1A1-209ENST00000495677 ZFP82Q8N141 532 aa8.42□□□□□ -1.06
COL1A1-209ENST00000495677 TMEM167BQ9NRX6 74 aa8.42□□□□□ -1.06
COL1A1-209ENST00000495677 A0A1W2PRE2 83 aa8.41□□□□□ -1.06
COL1A1-209ENST00000495677 M0R381 172 aa8.41□□□□□ -1.06
COL1A1-209ENST00000495677 GIPP09681 153 aaPredicted RBP8.41□□□□□ -1.06
COL1A1-209ENST00000495677 RAB24Q969Q5 203 aa8.41□□□□□ -1.06
COL1A1-209ENST00000495677 KRTAP9-2Q9BYQ4 174 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 440 ms