RNA–Protein interactions for RNA: ENST00000495445.5

CTNS-207, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 2

Gene CTNS, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-207ENST00000495445 RPL19P84098 196 aaKnown RBP11.66□□□□□ -0.54
CTNS-207ENST00000495445 C10orf126Q8N4M7 172 aa11.66□□□□□ -0.54
CTNS-207ENST00000495445 DERL1Q9BUN8 251 aa11.66□□□□□ -0.54
CTNS-207ENST00000495445 MSRB1Q9NZV6 116 aa11.66□□□□□ -0.54
CTNS-207ENST00000495445 TRAV8-6A0A0B4J262 113 aa11.65□□□□□ -0.54
CTNS-207ENST00000495445 SNAI2O43623 268 aa11.65□□□□□ -0.54
CTNS-207ENST00000495445 ZFP82Q8N141 532 aa11.65□□□□□ -0.54
CTNS-207ENST00000495445 C9orf62Q8N4C0 152 aa11.65□□□□□ -0.54
CTNS-207ENST00000495445 IBA57-AS1B1ANH7 110 aa11.64□□□□□ -0.55
CTNS-207ENST00000495445 M0R381 172 aa11.64□□□□□ -0.55
CTNS-207ENST00000495445 AKAP14Q86UN6 197 aa11.64□□□□□ -0.55
CTNS-207ENST00000495445 GAGE12JA6NER3 117 aa11.63□□□□□ -0.55
CTNS-207ENST00000495445 OR5AL1P0C617 328 aa11.63□□□□□ -0.55
CTNS-207ENST00000495445 MEF2BQ02080 365 aaPredicted RBP11.63□□□□□ -0.55
CTNS-207ENST00000495445 GAGE1Q13065 139 aa11.63□□□□□ -0.55
CTNS-207ENST00000495445 GAGE4Q13068 117 aa11.63□□□□□ -0.55
CTNS-207ENST00000495445 GAGE5Q13069 117 aa11.63□□□□□ -0.55
CTNS-207ENST00000495445 GAGE13Q4V321 117 aa11.63□□□□□ -0.55
CTNS-207ENST00000495445 OR10J3Q5JRS4 329 aa11.63□□□□□ -0.55
CTNS-207ENST00000495445 A0A087WWL8 130 aa11.62□□□□□ -0.55
CTNS-207ENST00000495445 PDE6DO43924 150 aa11.62□□□□□ -0.55
CTNS-207ENST00000495445 CDK2AP2O75956 126 aa11.62□□□□□ -0.55
CTNS-207ENST00000495445 SMIM12Q96EX1 92 aa11.62□□□□□ -0.55
CTNS-207ENST00000495445 PCLOQ9Y6V0 5065 aa11.61□□□□□ -0.55
CTNS-207ENST00000495445 RAB19A4D1S5 217 aa11.61□□□□□ -0.55
CTNS-207ENST00000495445 C19orf71A6NCJ1 209 aa11.61□□□□□ -0.55
CTNS-207ENST00000495445 FAM74A4Q5TZK3 123 aa11.61□□□□□ -0.55
CTNS-207ENST00000495445 PRR27Q6MZM9 219 aa11.61□□□□□ -0.55
CTNS-207ENST00000495445 OR10AG1Q8NH19 301 aa11.61□□□□□ -0.55
CTNS-207ENST00000495445 KRTAP17-1Q9BYP8 105 aa11.61□□□□□ -0.55
CTNS-207ENST00000495445 PGPEP1Q9NXJ5 209 aa11.61□□□□□ -0.55
CTNS-207ENST00000495445 DNAH8Q96JB1 4490 aa11.6□□□□□ -0.55
CTNS-207ENST00000495445 hCG_2014768A0A024R1R8 64 aa11.6□□□□□ -0.55
CTNS-207ENST00000495445 A0A087WTM6 91 aa11.6□□□□□ -0.55
CTNS-207ENST00000495445 TRBV10-1A0A0K0K1A3 114 aa11.6□□□□□ -0.55
CTNS-207ENST00000495445 IFNA1P01562 189 aa11.6□□□□□ -0.55
CTNS-207ENST00000495445 BCL2P10415 239 aa11.6□□□□□ -0.55
CTNS-207ENST00000495445 ERVFC1-1P60608 527 aa11.6□□□□□ -0.55
CTNS-207ENST00000495445 CENPWQ5EE01 88 aa11.6□□□□□ -0.55
CTNS-207ENST00000495445 VAX2Q9UIW0 290 aa11.6□□□□□ -0.55
CTNS-207ENST00000495445 TRBV20OR9-2A0A075B6H5 130 aa11.59□□□□□ -0.55
CTNS-207ENST00000495445 A0A087WWC5 75 aa11.59□□□□□ -0.55
CTNS-207ENST00000495445 TAGLN2P37802 199 aaKnown RBP11.59□□□□□ -0.55
CTNS-207ENST00000495445 RAB4BP61018 213 aa11.59□□□□□ -0.55
CTNS-207ENST00000495445 OR10G8Q8NGN5 311 aa11.59□□□□□ -0.55
CTNS-207ENST00000495445 GNG4P50150 75 aa11.58□□□□□ -0.56
CTNS-207ENST00000495445 LYPD6BQ8NI32 183 aa11.58□□□□□ -0.56
CTNS-207ENST00000495445 MED9Q9NWA0 146 aa11.58□□□□□ -0.56
CTNS-207ENST00000495445 KIF25-AS1Q9Y6Z4 181 aa11.58□□□□□ -0.56
CTNS-207ENST00000495445 EREGO14944 169 aa11.57□□□□□ -0.56
CTNS-207ENST00000495445 IGHV3-30P01768 117 aa11.57□□□□□ -0.56
CTNS-207ENST00000495445 IGHV3-33P01772 117 aa11.57□□□□□ -0.56
CTNS-207ENST00000495445 IGLC6P0CF74 106 aa11.57□□□□□ -0.56
CTNS-207ENST00000495445 IGHV3-30-3P0DP02 117 aa11.57□□□□□ -0.56
CTNS-207ENST00000495445 IGHV3-30-5P0DP03 117 aa11.57□□□□□ -0.56
CTNS-207ENST00000495445 UBE2D3P61077 147 aa11.57□□□□□ -0.56
CTNS-207ENST00000495445 UBE2D2P62837 147 aa11.57□□□□□ -0.56
CTNS-207ENST00000495445 LAGE3Q14657 143 aa11.57□□□□□ -0.56
CTNS-207ENST00000495445 TRBV7-3A0A075B6L6 115 aa11.56□□□□□ -0.56
CTNS-207ENST00000495445 LRCOL1A6NCL2 159 aa11.56□□□□□ -0.56
CTNS-207ENST00000495445 CDPF1Q6NVV7 123 aa11.56□□□□□ -0.56
CTNS-207ENST00000495445 Q8N3U1 123 aa11.56□□□□□ -0.56
CTNS-207ENST00000495445 DAZAP1Q96EP5 407 aaKnown RBP11.56□□□□□ -0.56
CTNS-207ENST00000495445 MUC21A0A0G2JKD1 596 aa11.55□□□□□ -0.56
CTNS-207ENST00000495445 MUC21A0A140T8X8 626 aa11.55□□□□□ -0.56
CTNS-207ENST00000495445 RPS20P60866 119 aaKnown RBP11.55□□□□□ -0.56
CTNS-207ENST00000495445 BLOC1S1P78537 153 aa11.55□□□□□ -0.56
CTNS-207ENST00000495445 RPL36AP83881 106 aaKnown RBP11.55□□□□□ -0.56
CTNS-207ENST00000495445 SPANXN1Q5VSR9 72 aa11.55□□□□□ -0.56
CTNS-207ENST00000495445 ALKAL2Q6UX46 152 aa11.55□□□□□ -0.56
CTNS-207ENST00000495445 RPL36ALQ969Q0 106 aaKnown RBP11.55□□□□□ -0.56
CTNS-207ENST00000495445 A0A1B0GVG6 124 aa11.54□□□□□ -0.56
CTNS-207ENST00000495445 GZMBP10144 247 aa11.54□□□□□ -0.56
CTNS-207ENST00000495445 NEXN-AS1Q8NBZ9 246 aa11.54□□□□□ -0.56
CTNS-207ENST00000495445 OR2D3Q8NGH3 330 aa11.54□□□□□ -0.56
CTNS-207ENST00000495445 KRTAP4-5Q9BYR2 181 aa11.54□□□□□ -0.56
CTNS-207ENST00000495445 BIN3Q9NQY0 253 aa11.54□□□□□ -0.56
CTNS-207ENST00000495445 ABCA13Q86UQ4 5058 aa11.54□□□□□ -0.56
CTNS-207ENST00000495445 FUSP35637 526 aaKnown RBP eCLIP11.53□□□□□ -0.56
CTNS-207ENST00000495445 DAZ4Q86SG3 579 aaKnown RBP11.53□□□□□ -0.56
CTNS-207ENST00000495445 NIT1Q86X76 327 aa11.53□□□□□ -0.56
CTNS-207ENST00000495445 DAZ3Q9NR90 486 aaKnown RBP11.53□□□□□ -0.56
CTNS-207ENST00000495445 RBFOX3A6NFN3 312 aa11.52□□□□□ -0.57
CTNS-207ENST00000495445 P01737 135 aa11.52□□□□□ -0.57
CTNS-207ENST00000495445 FER1L6-AS1Q8NA97 138 aa11.52□□□□□ -0.57
CTNS-207ENST00000495445 NUDT10Q8NFP7 164 aa11.52□□□□□ -0.57
CTNS-207ENST00000495445 OCC1Q8TAD7 63 aa11.52□□□□□ -0.57
CTNS-207ENST00000495445 NUDT11Q96G61 164 aa11.52□□□□□ -0.57
CTNS-207ENST00000495445 FAT1Q14517 4588 aa11.51□□□□□ -0.57
CTNS-207ENST00000495445 F2Z2F3 143 aa11.51□□□□□ -0.57
CTNS-207ENST00000495445 SSTP61278 116 aa11.51□□□□□ -0.57
CTNS-207ENST00000495445 CACNG7P62955 275 aa11.51□□□□□ -0.57
CTNS-207ENST00000495445 ZNF56Q15929 161 aa11.51□□□□□ -0.57
CTNS-207ENST00000495445 WDR73Q6P4I2 378 aa11.51□□□□□ -0.57
CTNS-207ENST00000495445 Q9HAA7 133 aa11.51□□□□□ -0.57
CTNS-207ENST00000495445 TRAV8-3A0A0A6YYJ7 113 aa11.5□□□□□ -0.57
CTNS-207ENST00000495445 XKRY2A2RUG3 117 aa11.5□□□□□ -0.57
CTNS-207ENST00000495445 TMEM250H0YL14 139 aa11.5□□□□□ -0.57
CTNS-207ENST00000495445 K7EN84 100 aa11.5□□□□□ -0.57
CTNS-207ENST00000495445 PSCAO43653 123 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms