RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 MED6O75586 246 aa5□□□□□ -1.61
GARNL3-219ENST00000495172 NBEAP1P0C6P0 100 aa5□□□□□ -1.61
GARNL3-219ENST00000495172 RANP62826 216 aaKnown RBP5□□□□□ -1.61
GARNL3-219ENST00000495172 FOXI1Q12951 378 aa5□□□□□ -1.61
GARNL3-219ENST00000495172 NRARPQ7Z6K4 114 aa5□□□□□ -1.61
GARNL3-219ENST00000495172 NEXN-AS1Q8NBZ9 246 aa5□□□□□ -1.61
GARNL3-219ENST00000495172 PTH2Q96A98 100 aa5□□□□□ -1.61
GARNL3-219ENST00000495172 OPRPNQ99935 248 aaPredicted RBP5□□□□□ -1.61
GARNL3-219ENST00000495172 MGAT4CQ9UBM8 478 aa5□□□□□ -1.61
GARNL3-219ENST00000495172 TRAV8-4A0A0B4J246 113 aa4.99□□□□□ -1.61
GARNL3-219ENST00000495172 TSHBP01222 138 aa4.99□□□□□ -1.61
GARNL3-219ENST00000495172 P01737 135 aa4.99□□□□□ -1.61
GARNL3-219ENST00000495172 TBPP20226 339 aa4.99□□□□□ -1.61
GARNL3-219ENST00000495172 CAMLGP49069 296 aa4.99□□□□□ -1.61
GARNL3-219ENST00000495172 MIR17HGQ75NE6 70 aa4.99□□□□□ -1.61
GARNL3-219ENST00000495172 FAM167A-AS1Q96KT0 104 aa4.99□□□□□ -1.61
GARNL3-219ENST00000495172 KRTAP4-11Q9BYQ6 195 aa4.99□□□□□ -1.61
GARNL3-219ENST00000495172 TREM1Q9NP99 234 aa4.99□□□□□ -1.61
GARNL3-219ENST00000495172 KCNIP3Q9Y2W7 256 aa4.99□□□□□ -1.61
GARNL3-219ENST00000495172 PHLDA3Q9Y5J5 127 aa4.99□□□□□ -1.61
GARNL3-219ENST00000495172 RBAKDNA6NC62 111 aa4.98□□□□□ -1.61
GARNL3-219ENST00000495172 HPGDSO60760 199 aa4.98□□□□□ -1.61
GARNL3-219ENST00000495172 S100A10P60903 97 aa4.98□□□□□ -1.61
GARNL3-219ENST00000495172 CFAP161Q6P656 301 aa4.98□□□□□ -1.61
GARNL3-219ENST00000495172 Q6ZRG5 221 aa4.98□□□□□ -1.61
GARNL3-219ENST00000495172 LINC00304Q8N9R0 145 aa4.98□□□□□ -1.61
GARNL3-219ENST00000495172 FXYD5Q96DB9 178 aa4.98□□□□□ -1.61
GARNL3-219ENST00000495172 SDHCQ99643 169 aaPredicted RBP4.98□□□□□ -1.61
GARNL3-219ENST00000495172 RPS19P39019 145 aaKnown RBP4.97□□□□□ -1.61
GARNL3-219ENST00000495172 CSN1S1P47710 185 aa4.97□□□□□ -1.61
GARNL3-219ENST00000495172 ZFP69Q49AA0 526 aa4.97□□□□□ -1.61
GARNL3-219ENST00000495172 TMEM14EPQ6UXP3 125 aa4.97□□□□□ -1.61
GARNL3-219ENST00000495172 GOLT1AQ6ZVE7 132 aa4.97□□□□□ -1.61
GARNL3-219ENST00000495172 OR1L4Q8NGR5 311 aa4.97□□□□□ -1.61
GARNL3-219ENST00000495172 MTFP1Q9UDX5 166 aa4.97□□□□□ -1.61
GARNL3-219ENST00000495172 RABL2BQ9UNT1 228 aa4.97□□□□□ -1.61
GARNL3-219ENST00000495172 LENEPQ9Y5L5 61 aa4.97□□□□□ -1.61
GARNL3-219ENST00000495172 H3BVH4 76 aa4.96□□□□□ -1.62
GARNL3-219ENST00000495172 SULT1A2P50226 295 aa4.96□□□□□ -1.62
GARNL3-219ENST00000495172 GNG5P63218 68 aa4.96□□□□□ -1.62
GARNL3-219ENST00000495172 C21orf62-AS1Q17RA5 79 aa4.96□□□□□ -1.62
GARNL3-219ENST00000495172 ZNF674Q2M3X9 581 aa4.96□□□□□ -1.62
GARNL3-219ENST00000495172 TMEM229BQ8NBD8 167 aa4.96□□□□□ -1.62
GARNL3-219ENST00000495172 DERL1Q9BUN8 251 aa4.96□□□□□ -1.62
GARNL3-219ENST00000495172 IGKV3D-20A0A0C4DH25 116 aa4.95□□□□□ -1.62
GARNL3-219ENST00000495172 LOC107984640A0A0U1RRK4 108 aa4.95□□□□□ -1.62
GARNL3-219ENST00000495172 SMIM31A0A1B0GVY4 71 aa4.95□□□□□ -1.62
GARNL3-219ENST00000495172 DUXBA0A1W2PPF3 345 aa4.95□□□□□ -1.62
GARNL3-219ENST00000495172 GCGP01275 180 aa4.95□□□□□ -1.62
GARNL3-219ENST00000495172 GZMBP10144 247 aa4.95□□□□□ -1.62
GARNL3-219ENST00000495172 RPL18AQ02543 176 aaKnown RBP4.95□□□□□ -1.62
GARNL3-219ENST00000495172 SYCNQ0VAF6 134 aa4.95□□□□□ -1.62
GARNL3-219ENST00000495172 C12orf45Q8N5I9 185 aaPredicted RBP4.95□□□□□ -1.62
GARNL3-219ENST00000495172 PFDN5Q99471 154 aa4.95□□□□□ -1.62
GARNL3-219ENST00000495172 NMES1Q9C002 83 aa4.95□□□□□ -1.62
GARNL3-219ENST00000495172 SLIRPQ9GZT3 109 aaKnown RBP4.95□□□□□ -1.62
GARNL3-219ENST00000495172 TRBV10-1A0A0K0K1A3 114 aa4.94□□□□□ -1.62
GARNL3-219ENST00000495172 FNDC10F2Z333 226 aa4.94□□□□□ -1.62
GARNL3-219ENST00000495172 RHODO00212 210 aa4.94□□□□□ -1.62
GARNL3-219ENST00000495172 S100A4P26447 101 aaKnown RBP4.94□□□□□ -1.62
GARNL3-219ENST00000495172 AQP4P55087 323 aa4.94□□□□□ -1.62
GARNL3-219ENST00000495172 TAS2R19P59542 299 aa4.94□□□□□ -1.62
GARNL3-219ENST00000495172 LSM3P62310 102 aaKnown RBP4.94□□□□□ -1.62
GARNL3-219ENST00000495172 FAM19A5Q7Z5A7 132 aaPredicted RBP4.94□□□□□ -1.62
GARNL3-219ENST00000495172 KRTAP7-1Q8IUC3 87 aa4.94□□□□□ -1.62
GARNL3-219ENST00000495172 OR10G8Q8NGN5 311 aa4.94□□□□□ -1.62
GARNL3-219ENST00000495172 CHCHD10Q8WYQ3 142 aaPredicted RBP4.94□□□□□ -1.62
GARNL3-219ENST00000495172 TRBV25-1A0A075B6N4 114 aa4.93□□□□□ -1.62
GARNL3-219ENST00000495172 TRBV6-1A0A0K0K1D8 114 aa4.93□□□□□ -1.62
GARNL3-219ENST00000495172 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.93□□□□□ -1.62
GARNL3-219ENST00000495172 M0R381 172 aa4.93□□□□□ -1.62
GARNL3-219ENST00000495172 ATP5HO75947 161 aa4.93□□□□□ -1.62
GARNL3-219ENST00000495172 SLC25A6P12236 298 aa4.93□□□□□ -1.62
GARNL3-219ENST00000495172 DEFA3P59666 94 aa4.93□□□□□ -1.62
GARNL3-219ENST00000495172 PKIAP61925 76 aa4.93□□□□□ -1.62
GARNL3-219ENST00000495172 MEF2BQ02080 365 aaPredicted RBP4.93□□□□□ -1.62
GARNL3-219ENST00000495172 EIF5AL1Q6IS14 154 aaKnown RBP4.93□□□□□ -1.62
GARNL3-219ENST00000495172 KRTAP5-3Q6L8H2 238 aa4.93□□□□□ -1.62
GARNL3-219ENST00000495172 TSKUQ8WUA8 353 aa4.93□□□□□ -1.62
GARNL3-219ENST00000495172 MITD1Q8WV92 249 aa4.93□□□□□ -1.62
GARNL3-219ENST00000495172 SFRP2Q96HF1 295 aa4.93□□□□□ -1.62
GARNL3-219ENST00000495172 RABL2AQ9UBK7 228 aaPredicted RBP4.93□□□□□ -1.62
GARNL3-219ENST00000495172 UBE2L5PA0A1B0GUS4 154 aa4.92□□□□□ -1.62
GARNL3-219ENST00000495172 GRIFINA4D1Z8 144 aa4.92□□□□□ -1.62
GARNL3-219ENST00000495172 DISC1C4P0D8 188 aa4.92□□□□□ -1.62
GARNL3-219ENST00000495172 TSC22D2O75157 780 aa4.92□□□□□ -1.62
GARNL3-219ENST00000495172 SCGB1D2O95969 90 aa4.92□□□□□ -1.62
GARNL3-219ENST00000495172 APOA1P02647 267 aa4.92□□□□□ -1.62
GARNL3-219ENST00000495172 TMED6Q8WW62 240 aa4.92□□□□□ -1.62
GARNL3-219ENST00000495172 SMIM8Q96KF7 97 aa4.92□□□□□ -1.62
GARNL3-219ENST00000495172 AQP10Q96PS8 301 aa4.92□□□□□ -1.62
GARNL3-219ENST00000495172 KRTAP9-8Q9BYQ0 159 aa4.92□□□□□ -1.62
GARNL3-219ENST00000495172 IGLV8-61A0A075B6I0 122 aa4.91□□□□□ -1.62
GARNL3-219ENST00000495172 FAM25AB3EWG3 89 aa4.91□□□□□ -1.62
GARNL3-219ENST00000495172 FAM25CB3EWG5 89 aa4.91□□□□□ -1.62
GARNL3-219ENST00000495172 FAM25GB3EWG6 89 aa4.91□□□□□ -1.62
GARNL3-219ENST00000495172 ARMS2P0C7Q2 107 aa4.91□□□□□ -1.62
GARNL3-219ENST00000495172 ZNF56Q15929 161 aa4.91□□□□□ -1.62
GARNL3-219ENST00000495172 CTF1Q16619 201 aa4.91□□□□□ -1.62
GARNL3-219ENST00000495172 IQCJQ1A5X6 159 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms