RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 TRBV12-3P01733 135 aa11.51□□□□□ -0.57
SDF4-207ENST00000494748 ZNF688P0C7X2 276 aa11.51□□□□□ -0.57
SDF4-207ENST00000494748 S100A4P26447 101 aaKnown RBP11.51□□□□□ -0.57
SDF4-207ENST00000494748 RNF183Q96D59 192 aa11.51□□□□□ -0.57
SDF4-207ENST00000494748 CRIP2P52943 208 aaPredicted RBP11.51□□□□□ -0.57
SDF4-207ENST00000494748 ZNF876PQ49A33 203 aa11.51□□□□□ -0.57
SDF4-207ENST00000494748 JPT2Q9H910 190 aa11.51□□□□□ -0.57
SDF4-207ENST00000494748 RNASE4P34096 147 aaKnown RBP11.51□□□□□ -0.57
SDF4-207ENST00000494748 SAA4P35542 130 aa11.51□□□□□ -0.57
SDF4-207ENST00000494748 CITED1Q99966 193 aa11.51□□□□□ -0.57
SDF4-207ENST00000494748 UBE2E1P51965 193 aa11.5□□□□□ -0.57
SDF4-207ENST00000494748 OVOL1O14753 267 aa11.5□□□□□ -0.57
SDF4-207ENST00000494748 TGFAP01135 160 aa11.5□□□□□ -0.57
SDF4-207ENST00000494748 A8MWV9 139 aa11.49□□□□□ -0.57
SDF4-207ENST00000494748 PPP1R17O96001 155 aa11.49□□□□□ -0.57
SDF4-207ENST00000494748 PAPPA-AS1Q5QFB9 102 aa11.49□□□□□ -0.57
SDF4-207ENST00000494748 LYRM7Q5U5X0 104 aa11.49□□□□□ -0.57
SDF4-207ENST00000494748 SUMO4Q6EEV6 95 aa11.49□□□□□ -0.57
SDF4-207ENST00000494748 OR10J6PQ8NGY7 276 aa11.49□□□□□ -0.57
SDF4-207ENST00000494748 TIMM17AQ99595 171 aa11.49□□□□□ -0.57
SDF4-207ENST00000494748 PRO1854Q9UHT4 67 aa11.49□□□□□ -0.57
SDF4-207ENST00000494748 M0QXV9 152 aa11.49□□□□□ -0.57
SDF4-207ENST00000494748 HERVK_113P61574 105 aa11.48□□□□□ -0.57
SDF4-207ENST00000494748 TMEM141Q96I45 108 aa11.48□□□□□ -0.57
SDF4-207ENST00000494748 CSPG4Q6UVK1 2322 aa11.48□□□□□ -0.57
SDF4-207ENST00000494748 TMEM263Q8WUH6 116 aaKnown RBP11.48□□□□□ -0.57
SDF4-207ENST00000494748 ARL3P36405 182 aa11.48□□□□□ -0.57
SDF4-207ENST00000494748 ELANEP08246 267 aa11.47□□□□□ -0.57
SDF4-207ENST00000494748 VCX2Q9H322 139 aa11.47□□□□□ -0.57
SDF4-207ENST00000494748 J3QQQ9 107 aa11.47□□□□□ -0.57
SDF4-207ENST00000494748 IGHV3-33P01772 117 aa11.47□□□□□ -0.57
SDF4-207ENST00000494748 NHLRC4P0CG21 123 aaPredicted RBP11.47□□□□□ -0.57
SDF4-207ENST00000494748 TRPT1Q86TN4 253 aaKnown RBP11.47□□□□□ -0.57
SDF4-207ENST00000494748 LINC00527Q9UJ94 153 aa11.47□□□□□ -0.57
SDF4-207ENST00000494748 TRBV27A0A0K0K1C4 114 aa11.46□□□□□ -0.58
SDF4-207ENST00000494748 A4D1N5 150 aa11.46□□□□□ -0.58
SDF4-207ENST00000494748 FAM223BA6NKX1 122 aa11.46□□□□□ -0.58
SDF4-207ENST00000494748 KLLNB2CW77 178 aa11.46□□□□□ -0.58
SDF4-207ENST00000494748 FAM223AQ8IWN6 122 aa11.46□□□□□ -0.58
SDF4-207ENST00000494748 TRBV7-9A0A0J9YWB2 115 aa11.46□□□□□ -0.58
SDF4-207ENST00000494748 A0A1W2PPR1 153 aa11.46□□□□□ -0.58
SDF4-207ENST00000494748 TMEM170BQ5T4T1 132 aa11.46□□□□□ -0.58
SDF4-207ENST00000494748 SLC25A20O43772 301 aa11.45□□□□□ -0.58
SDF4-207ENST00000494748 LINC01600Q96MT4 127 aa11.45□□□□□ -0.58
SDF4-207ENST00000494748 SETD2Q9BYW2 2564 aaPredicted RBP11.45□□□□□ -0.58
SDF4-207ENST00000494748 ABCA2Q9BZC7 2435 aa11.45□□□□□ -0.58
SDF4-207ENST00000494748 TRAV41A0A0B4J266 112 aa11.45□□□□□ -0.58
SDF4-207ENST00000494748 TMEM223A0PJW6 202 aa11.45□□□□□ -0.58
SDF4-207ENST00000494748 TMEM219Q86XT9 240 aa11.45□□□□□ -0.58
SDF4-207ENST00000494748 OPRPNQ99935 248 aaPredicted RBP11.44□□□□□ -0.58
SDF4-207ENST00000494748 NDUFA4O00483 81 aa11.44□□□□□ -0.58
SDF4-207ENST00000494748 VCYO14598 125 aa11.44□□□□□ -0.58
SDF4-207ENST00000494748 SRD5A1P18405 259 aa11.44□□□□□ -0.58
SDF4-207ENST00000494748 A0A087WWL8 130 aa11.44□□□□□ -0.58
SDF4-207ENST00000494748 TRBV6-5A0A0K0K1A5 114 aa11.44□□□□□ -0.58
SDF4-207ENST00000494748 SDHAF1A6NFY7 115 aa11.44□□□□□ -0.58
SDF4-207ENST00000494748 LGALS9O00182 355 aa11.44□□□□□ -0.58
SDF4-207ENST00000494748 RAX2Q96IS3 184 aa11.44□□□□□ -0.58
SDF4-207ENST00000494748 ADORA2A-AS1P86434 159 aa11.43□□□□□ -0.58
SDF4-207ENST00000494748 A0A0B4J2C4 111 aa11.43□□□□□ -0.58
SDF4-207ENST00000494748 P0DMU3 169 aa11.43□□□□□ -0.58
SDF4-207ENST00000494748 FAM231AP0DMU4 169 aa11.43□□□□□ -0.58
SDF4-207ENST00000494748 FAM231CP0DMU5 169 aa11.43□□□□□ -0.58
SDF4-207ENST00000494748 C9JAW5 83 aa11.43□□□□□ -0.58
SDF4-207ENST00000494748 LEPROTO15243 131 aa11.42□□□□□ -0.58
SDF4-207ENST00000494748 CCL21O00585 134 aa11.42□□□□□ -0.58
SDF4-207ENST00000494748 NPFFO15130 113 aa11.42□□□□□ -0.58
SDF4-207ENST00000494748 ZNF580Q9UK33 172 aa11.42□□□□□ -0.58
SDF4-207ENST00000494748 CRLF1O75462 422 aa11.41□□□□□ -0.58
SDF4-207ENST00000494748 IGHV1-69P01742 117 aa11.41□□□□□ -0.58
SDF4-207ENST00000494748 SCGB1C2P0DMR2 95 aa11.41□□□□□ -0.58
SDF4-207ENST00000494748 EDN2P20800 178 aa11.41□□□□□ -0.58
SDF4-207ENST00000494748 ZFAND6Q6FIF0 208 aa11.41□□□□□ -0.58
SDF4-207ENST00000494748 IGKV3-7A0A075B6H7 116 aa11.41□□□□□ -0.58
SDF4-207ENST00000494748 TMEM262E9PQX1 116 aa11.41□□□□□ -0.58
SDF4-207ENST00000494748 ZNF22P17026 224 aaPredicted RBP11.41□□□□□ -0.58
SDF4-207ENST00000494748 NSUN5P1Q3KNT7 163 aa11.41□□□□□ -0.58
SDF4-207ENST00000494748 MUSTN1Q8IVN3 82 aa11.41□□□□□ -0.58
SDF4-207ENST00000494748 PTPN13Q12923 2485 aa11.41□□□□□ -0.58
SDF4-207ENST00000494748 RHODO00212 210 aa11.4□□□□□ -0.58
SDF4-207ENST00000494748 LGALS3P17931 250 aaKnown RBP11.4□□□□□ -0.58
SDF4-207ENST00000494748 LMO4P61968 165 aa11.4□□□□□ -0.58
SDF4-207ENST00000494748 ANAPC13Q9BS18 74 aa11.4□□□□□ -0.58
SDF4-207ENST00000494748 FAM104AQ969W3 186 aa11.4□□□□□ -0.58
SDF4-207ENST00000494748 M0R2P5 195 aa11.4□□□□□ -0.58
SDF4-207ENST00000494748 LITAFQ99732 161 aa11.4□□□□□ -0.58
SDF4-207ENST00000494748 M0QY20 66 aa11.39□□□□□ -0.59
SDF4-207ENST00000494748 C9orf85Q96MD7 179 aa11.39□□□□□ -0.59
SDF4-207ENST00000494748 MOB4Q9Y3A3 225 aa11.39□□□□□ -0.59
SDF4-207ENST00000494748 IGF2RP11717 2491 aa11.39□□□□□ -0.59
SDF4-207ENST00000494748 TCF15Q12870 199 aa11.39□□□□□ -0.59
SDF4-207ENST00000494748 Q8N1Y9 231 aa11.39□□□□□ -0.59
SDF4-207ENST00000494748 TRAV4A0A0B4J268 109 aa11.39□□□□□ -0.59
SDF4-207ENST00000494748 A0A0J9YX75 114 aa11.39□□□□□ -0.59
SDF4-207ENST00000494748 SONP18583 2426 aaKnown RBP11.39□□□□□ -0.59
SDF4-207ENST00000494748 BRI3O95415 125 aa11.38□□□□□ -0.59
SDF4-207ENST00000494748 TEX29Q8N6K0 151 aa11.38□□□□□ -0.59
SDF4-207ENST00000494748 ODF3Q96PU9 254 aa11.38□□□□□ -0.59
SDF4-207ENST00000494748 TRAV2A0A0B4J234 112 aa11.38□□□□□ -0.59
SDF4-207ENST00000494748 NACAE9PAV3 2078 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms