RNA–Protein interactions for RNA: ENST00000494746.1

CALCA-206, Transcript of calcitonin related polypeptide alpha, humanhuman

TSL 1 (best)

Gene CALCA, Length 1,837 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCA-206ENST00000494746 HLA-DRB4P13762 266 aa7.09□□□□□ -1.27
CALCA-206ENST00000494746 CMC4P56277 68 aaPredicted RBP7.09□□□□□ -1.27
CALCA-206ENST00000494746 FOXI2Q6ZQN5 318 aa7.09□□□□□ -1.27
CALCA-206ENST00000494746 LYPD1Q8N2G4 141 aa7.09□□□□□ -1.27
CALCA-206ENST00000494746 SPATA25Q9BR10 227 aa7.09□□□□□ -1.27
CALCA-206ENST00000494746 OTORQ9NRC9 128 aa7.09□□□□□ -1.27
CALCA-206ENST00000494746 HLA-DRB4X5D2U9 266 aa7.09□□□□□ -1.27
CALCA-206ENST00000494746 A0A0J9YX75 114 aa7.08□□□□□ -1.28
CALCA-206ENST00000494746 TEX48A0A1B0GUV7 120 aa7.08□□□□□ -1.28
CALCA-206ENST00000494746 CA1P00915 261 aaPredicted RBP7.08□□□□□ -1.28
CALCA-206ENST00000494746 CAMPP49913 170 aa7.08□□□□□ -1.28
CALCA-206ENST00000494746 MRAPQ8TCY5 172 aa7.08□□□□□ -1.28
CALCA-206ENST00000494746 ZC2HC1AQ96GY0 325 aa7.08□□□□□ -1.28
CALCA-206ENST00000494746 PGPA6NDG6 321 aa7.08□□□□□ -1.28
CALCA-206ENST00000494746 HIGD1CA8MV81 97 aa7.08□□□□□ -1.28
CALCA-206ENST00000494746 A8MZ25 164 aa7.08□□□□□ -1.28
CALCA-206ENST00000494746 H3BMM0 161 aa7.08□□□□□ -1.28
CALCA-206ENST00000494746 IGKV3-20P01619 116 aa7.08□□□□□ -1.28
CALCA-206ENST00000494746 FGF6P10767 208 aa7.08□□□□□ -1.28
CALCA-206ENST00000494746 RPL35AP18077 110 aaKnown RBP7.08□□□□□ -1.28
CALCA-206ENST00000494746 CRYBA4P53673 196 aa7.08□□□□□ -1.28
CALCA-206ENST00000494746 GNG5P63218 68 aa7.08□□□□□ -1.28
CALCA-206ENST00000494746 DEFB121Q5J5C9 76 aa7.08□□□□□ -1.28
CALCA-206ENST00000494746 TRPT1Q86TN4 253 aaKnown RBP7.08□□□□□ -1.28
CALCA-206ENST00000494746 STHQ8IWL8 128 aa7.08□□□□□ -1.28
CALCA-206ENST00000494746 OR8A1Q8NGG7 326 aa7.08□□□□□ -1.28
CALCA-206ENST00000494746 MRPL53Q96EL3 112 aaKnown RBP7.08□□□□□ -1.28
CALCA-206ENST00000494746 TRAV26-1A0A087WT03 109 aa7.07□□□□□ -1.28
CALCA-206ENST00000494746 IGKV2-40A0A087WW87 121 aaPredicted RBP7.07□□□□□ -1.28
CALCA-206ENST00000494746 K7EQM0 130 aa7.07□□□□□ -1.28
CALCA-206ENST00000494746 IGKV2D-40P01614 121 aaPredicted RBP7.07□□□□□ -1.28
CALCA-206ENST00000494746 CT83Q5H943 113 aa7.07□□□□□ -1.28
CALCA-206ENST00000494746 NDFIP1Q9BT67 221 aa7.07□□□□□ -1.28
CALCA-206ENST00000494746 SERTM2A0A1B0GWG4 89 aa7.06□□□□□ -1.28
CALCA-206ENST00000494746 SLC25A5P05141 298 aaKnown RBP7.06□□□□□ -1.28
CALCA-206ENST00000494746 SMIM13P0DJ93 91 aa7.06□□□□□ -1.28
CALCA-206ENST00000494746 LINC00322Q6ZN03 302 aaPredicted RBP7.06□□□□□ -1.28
CALCA-206ENST00000494746 BOD1L2Q8IYS8 172 aa7.06□□□□□ -1.28
CALCA-206ENST00000494746 VGLL1Q99990 258 aa7.06□□□□□ -1.28
CALCA-206ENST00000494746 A8MWL6 223 aa7.06□□□□□ -1.28
CALCA-206ENST00000494746 H0Y8G0 127 aa7.06□□□□□ -1.28
CALCA-206ENST00000494746 PEX7O00628 323 aa7.06□□□□□ -1.28
CALCA-206ENST00000494746 CSN1S1P47710 185 aa7.06□□□□□ -1.28
CALCA-206ENST00000494746 AMTNQ6UX39 209 aa7.06□□□□□ -1.28
CALCA-206ENST00000494746 RAB37Q96AX2 223 aa7.06□□□□□ -1.28
CALCA-206ENST00000494746 TRAV8-1A0A0A6YYK1 113 aa7.05□□□□□ -1.28
CALCA-206ENST00000494746 A8MTW9 85 aa7.05□□□□□ -1.28
CALCA-206ENST00000494746 NPIPB6E9PJ23 425 aa7.05□□□□□ -1.28
CALCA-206ENST00000494746 F8W1H4 67 aa7.05□□□□□ -1.28
CALCA-206ENST00000494746 TCRAP04437 139 aa7.05□□□□□ -1.28
CALCA-206ENST00000494746 GIG44P09565 113 aaPredicted RBP7.05□□□□□ -1.28
CALCA-206ENST00000494746 FOXA3P55318 350 aaPredicted RBP7.05□□□□□ -1.28
CALCA-206ENST00000494746 ERCC8Q13216 396 aa7.05□□□□□ -1.28
CALCA-206ENST00000494746 GOLT1AQ6ZVE7 132 aa7.05□□□□□ -1.28
CALCA-206ENST00000494746 OR10J6PQ8NGY7 276 aa7.05□□□□□ -1.28
CALCA-206ENST00000494746 NAA38Q9BRA0 125 aaKnown RBP7.05□□□□□ -1.28
CALCA-206ENST00000494746 RPP21Q9H633 154 aaKnown RBP7.05□□□□□ -1.28
CALCA-206ENST00000494746 GEMIN7Q9H840 131 aaKnown RBP7.05□□□□□ -1.28
CALCA-206ENST00000494746 EPDR1Q9UM22 224 aa7.05□□□□□ -1.28
CALCA-206ENST00000494746 SNAI2O43623 268 aa7.04□□□□□ -1.28
CALCA-206ENST00000494746 FXYD7P58549 80 aa7.04□□□□□ -1.28
CALCA-206ENST00000494746 C9orf47Q6ZRZ4 202 aa7.04□□□□□ -1.28
CALCA-206ENST00000494746 Q8TAT8 98 aa7.04□□□□□ -1.28
CALCA-206ENST00000494746 ASCL2Q99929 193 aa7.04□□□□□ -1.28
CALCA-206ENST00000494746 GFRA4Q9GZZ7 299 aa7.04□□□□□ -1.28
CALCA-206ENST00000494746 AGPAT4-IT1Q9H0P7 198 aa7.04□□□□□ -1.28
CALCA-206ENST00000494746 SPANXB1Q9NS25 103 aaPredicted RBP7.04□□□□□ -1.28
CALCA-206ENST00000494746 MRPL16Q9NX20 251 aaKnown RBP7.04□□□□□ -1.28
CALCA-206ENST00000494746 DUSP14O95147 198 aaKnown RBP7.04□□□□□ -1.28
CALCA-206ENST00000494746 CT45A10P0DMU9 189 aa7.04□□□□□ -1.28
CALCA-206ENST00000494746 SPINK13Q1W4C9 94 aa7.04□□□□□ -1.28
CALCA-206ENST00000494746 LGALS9BQ3B8N2 356 aa7.04□□□□□ -1.28
CALCA-206ENST00000494746 LGALS9CQ6DKI2 356 aa7.04□□□□□ -1.28
CALCA-206ENST00000494746 SBSPONQ8IVN8 264 aa7.04□□□□□ -1.28
CALCA-206ENST00000494746 SGK494Q96LW2 274 aa7.04□□□□□ -1.28
CALCA-206ENST00000494746 LINC00479Q96M42 142 aa7.04□□□□□ -1.28
CALCA-206ENST00000494746 ZNF492Q9P255 531 aa7.04□□□□□ -1.28
CALCA-206ENST00000494746 RBAKDNA6NC62 111 aa7.03□□□□□ -1.28
CALCA-206ENST00000494746 IGLV2-11P01706 119 aa7.03□□□□□ -1.28
CALCA-206ENST00000494746 APOC4P55056 127 aa7.03□□□□□ -1.28
CALCA-206ENST00000494746 OR11H2Q8NH07 326 aa7.03□□□□□ -1.28
CALCA-206ENST00000494746 KIR2DL5BQ8NHK3 375 aa7.03□□□□□ -1.28
CALCA-206ENST00000494746 AP5S1Q9NUS5 200 aa7.03□□□□□ -1.28
CALCA-206ENST00000494746 XCL2Q9UBD3 114 aa7.03□□□□□ -1.28
CALCA-206ENST00000494746 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.02□□□□□ -1.29
CALCA-206ENST00000494746 DEFB135Q30KP9 77 aa7.02□□□□□ -1.29
CALCA-206ENST00000494746 TMEM78Q5T7P6 136 aa7.02□□□□□ -1.29
CALCA-206ENST00000494746 MORN3Q6PF18 240 aaPredicted RBP7.02□□□□□ -1.29
CALCA-206ENST00000494746 FAM19A4Q96LR4 140 aa7.02□□□□□ -1.29
CALCA-206ENST00000494746 TRAV12-2A0A075B6T6 113 aa7.01□□□□□ -1.29
CALCA-206ENST00000494746 J3KRW8 73 aa7.01□□□□□ -1.29
CALCA-206ENST00000494746 P01737 135 aa7.01□□□□□ -1.29
CALCA-206ENST00000494746 PGLYRP4Q96LB8 373 aa7.01□□□□□ -1.29
CALCA-206ENST00000494746 B9D2Q9BPU9 175 aa7.01□□□□□ -1.29
CALCA-206ENST00000494746 RETNQ9HD89 108 aa7.01□□□□□ -1.29
CALCA-206ENST00000494746 HIGD1BQ9P298 99 aa7.01□□□□□ -1.29
CALCA-206ENST00000494746 TSPAN13O95857 204 aa7.01□□□□□ -1.29
CALCA-206ENST00000494746 ZNF138P52744 262 aa7.01□□□□□ -1.29
CALCA-206ENST00000494746 PRR9Q5T870 116 aa7.01□□□□□ -1.29
CALCA-206ENST00000494746 TMEM75Q8N9X5 138 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms