RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 TMEM223A0PJW6 202 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 MBD3L4A6NDZ8 208 aaPredicted RBP2.07□□□□□ -2.08
MDC1-208ENST00000494654 MBD3L3A6NE82 208 aaPredicted RBP2.07□□□□□ -2.08
MDC1-208ENST00000494654 MBD3L5A6NJ08 208 aaPredicted RBP2.07□□□□□ -2.08
MDC1-208ENST00000494654 H3BTX0 84 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 H7C423 109 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 J3QQQ9 107 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 LEPROTO15243 131 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 TIMM8AO60220 97 aaPredicted RBP2.07□□□□□ -2.08
MDC1-208ENST00000494654 NDUFC2O95298 119 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 IGLV2-23P01705 113 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 IGHV1-69P01742 117 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 TRGV3P03979 118 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 TFF1P04155 84 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 IGKV1-16P04430 117 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 COX6CP09669 75 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 INAFM2P0DMQ5 153 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 EGR2P11161 476 aaPredicted RBP2.07□□□□□ -2.08
MDC1-208ENST00000494654 GATA1P15976 413 aaPredicted RBP2.07□□□□□ -2.08
MDC1-208ENST00000494654 LGALS3P17931 250 aaKnown RBP2.07□□□□□ -2.08
MDC1-208ENST00000494654 PSMB8P28062 276 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 PFN2P35080 140 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 RPL27AP46776 148 aaKnown RBP2.07□□□□□ -2.08
MDC1-208ENST00000494654 DEFB133Q30KQ1 61 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 HES3Q5TGS1 186 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 FAM222AQ5U5X8 452 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 TMEM200BQ69YZ2 307 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 Q6JHZ5 121 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 DUX4L9Q6RFH8 374 aaPredicted RBP2.07□□□□□ -2.08
MDC1-208ENST00000494654 HRCT1Q6UXD1 115 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 C2orf66Q6UXQ4 117 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 ZNF826PQ6ZT77 177 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 LINC00311Q8N616 119 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 SERP2Q8N6R1 65 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 C8orf31Q8N9H6 132 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 SMCR5Q8TEV8 140 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 RNF125Q96EQ8 232 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 IMMP1LQ96LU5 166 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 SCGB3A1Q96QR1 104 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 TIMM17AQ99595 171 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 JPT2Q9H910 190 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 RPUSD1Q9UJJ7 312 aaKnown RBP2.07□□□□□ -2.08
MDC1-208ENST00000494654 PYGO1Q9Y3Y4 419 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 COL12A1Q99715 3063 aa2.07□□□□□ -2.08
MDC1-208ENST00000494654 UTP20O75691 2785 aaKnown RBP2.07□□□□□ -2.08
MDC1-208ENST00000494654 USP9XQ93008 2570 aaPredicted RBP2.06□□□□□ -2.08
MDC1-208ENST00000494654 MED13Q9UHV7 2174 aa2.06□□□□□ -2.08
MDC1-208ENST00000494654 IGKV2-40A0A087WW87 121 aaPredicted RBP2.06□□□□□ -2.08
MDC1-208ENST00000494654 TRBV7-1A0A0A6YYK4 115 aa2.06□□□□□ -2.08
MDC1-208ENST00000494654 TRAV13-1A0A0B4J241 112 aa2.06□□□□□ -2.08
MDC1-208ENST00000494654 FAM236DA0A1B0GTK5 79 aa2.06□□□□□ -2.08
MDC1-208ENST00000494654 hADV29S1A0JD25 119 aa2.06□□□□□ -2.08
MDC1-208ENST00000494654 E7EUB6 86 aa2.06□□□□□ -2.08
MDC1-208ENST00000494654 I3L2K1 104 aa2.06□□□□□ -2.08
MDC1-208ENST00000494654 M0R3E3 92 aa2.06□□□□□ -2.08
MDC1-208ENST00000494654 ZNHIT1O43257 154 aa2.06□□□□□ -2.08
MDC1-208ENST00000494654 GAS8-AS1O95177 125 aa2.06□□□□□ -2.08
MDC1-208ENST00000494654 PPP1R17O96001 155 aa2.06□□□□□ -2.08
MDC1-208ENST00000494654 IGKV2D-40P01614 121 aaPredicted RBP2.06□□□□□ -2.08
MDC1-208ENST00000494654 IGKV3-15P01624 115 aa2.06□□□□□ -2.08
MDC1-208ENST00000494654 IGHV4-39P01824 125 aa2.06□□□□□ -2.08
MDC1-208ENST00000494654 ZNF883P0CG24 379 aa2.06□□□□□ -2.08
MDC1-208ENST00000494654 FAM236CP0DP71 79 aa2.06□□□□□ -2.08
MDC1-208ENST00000494654 ZNF80P51504 273 aaPredicted RBP2.06□□□□□ -2.08
MDC1-208ENST00000494654 NXPH1P58417 271 aa2.06□□□□□ -2.08
MDC1-208ENST00000494654 NPC2P61916 151 aa2.06□□□□□ -2.08
MDC1-208ENST00000494654 SUMO2P61956 95 aaKnown RBP2.06□□□□□ -2.08
MDC1-208ENST00000494654 CCL8P80075 99 aa2.06□□□□□ -2.08
MDC1-208ENST00000494654 C4orf26Q17RF5 130 aa2.06□□□□□ -2.08
MDC1-208ENST00000494654 MRGPRG-AS1Q2M3A8 158 aa2.06□□□□□ -2.08
MDC1-208ENST00000494654 C10orf55Q5SWW7 151 aa2.06□□□□□ -2.08
MDC1-208ENST00000494654 RUSC1-AS1Q66K80 236 aa2.06□□□□□ -2.08
MDC1-208ENST00000494654 CXorf67Q86X51 503 aaPredicted RBP2.06□□□□□ -2.08
MDC1-208ENST00000494654 PRIMA1Q86XR5 153 aa2.06□□□□□ -2.08
MDC1-208ENST00000494654 TMEM86BQ8N661 226 aa2.06□□□□□ -2.08
MDC1-208ENST00000494654 C14orf178Q8N769 122 aaPredicted RBP2.06□□□□□ -2.08
MDC1-208ENST00000494654 MRPL53Q96EL3 112 aaKnown RBP2.06□□□□□ -2.08
MDC1-208ENST00000494654 TMEM141Q96I45 108 aa2.06□□□□□ -2.08
MDC1-208ENST00000494654 GAFA1Q96PS6 74 aa2.06□□□□□ -2.08
MDC1-208ENST00000494654 DSCR8Q96T75 97 aa2.06□□□□□ -2.08
MDC1-208ENST00000494654 CYSTM1Q9H1C7 97 aa2.06□□□□□ -2.08
MDC1-208ENST00000494654 DPH3P1Q9H4G8 78 aa2.06□□□□□ -2.08
MDC1-208ENST00000494654 MSRB1Q9NZV6 116 aa2.06□□□□□ -2.08
MDC1-208ENST00000494654 SERP1Q9Y6X1 66 aa2.06□□□□□ -2.08
MDC1-208ENST00000494654 URB1O60287 2271 aaKnown RBP2.06□□□□□ -2.08
MDC1-208ENST00000494654 KALRNO60229 2985 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 DOPEY2Q9Y3R5 2298 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 RELNP78509 3460 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 APC2O95996 2303 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 TEX22C9J3V5 150 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 NTN3O00634 580 aaPredicted RBP2.05□□□□□ -2.08
MDC1-208ENST00000494654 COX7A2LO14548 114 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 BUB3O43684 328 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 TIMM17BO60830 172 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 NXPH4O95158 308 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 IGKV1-17P01599 117 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 RFPL3SP0C7P2 107 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 ZNF22P17026 224 aaPredicted RBP2.05□□□□□ -2.08
MDC1-208ENST00000494654 MAGEA5P43359 124 aa2.05□□□□□ -2.08
MDC1-208ENST00000494654 DLX1P56177 255 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms