RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 IGHV3OR16-12A0A075B7B8 117 aa8.31□□□□□ -1.08
CSNK1E-212ENST00000494610 H3BVH4 76 aa8.31□□□□□ -1.08
CSNK1E-212ENST00000494610 MT-ND6P03923 174 aa8.31□□□□□ -1.08
CSNK1E-212ENST00000494610 HBBP68871 147 aa8.31□□□□□ -1.08
CSNK1E-212ENST00000494610 ELOBQ15370 118 aa8.31□□□□□ -1.08
CSNK1E-212ENST00000494610 SMIM15Q7Z3B0 74 aa8.31□□□□□ -1.08
CSNK1E-212ENST00000494610 C1orf158Q8N1D5 194 aa8.31□□□□□ -1.08
CSNK1E-212ENST00000494610 NUP35Q8NFH5 326 aa8.31□□□□□ -1.08
CSNK1E-212ENST00000494610 PGLYRP4Q96LB8 373 aa8.31□□□□□ -1.08
CSNK1E-212ENST00000494610 SSBP4Q9BWG4 385 aaPredicted RBP8.31□□□□□ -1.08
CSNK1E-212ENST00000494610 PHLDA3Q9Y5J5 127 aa8.31□□□□□ -1.08
CSNK1E-212ENST00000494610 IGHV3-16A0A0C4DH30 117 aa8.3□□□□□ -1.08
CSNK1E-212ENST00000494610 GRIFINA4D1Z8 144 aa8.3□□□□□ -1.08
CSNK1E-212ENST00000494610 SNURFLB1AK76 121 aa8.3□□□□□ -1.08
CSNK1E-212ENST00000494610 SCO1O75880 301 aa8.3□□□□□ -1.08
CSNK1E-212ENST00000494610 ARMS2P0C7Q2 107 aa8.3□□□□□ -1.08
CSNK1E-212ENST00000494610 TRGC1P0CF51 173 aa8.3□□□□□ -1.08
CSNK1E-212ENST00000494610 FAM3BP58499 235 aaPredicted RBP8.3□□□□□ -1.08
CSNK1E-212ENST00000494610 TNP2Q05952 138 aa8.3□□□□□ -1.08
CSNK1E-212ENST00000494610 PIK3CD-AS1Q5SR53 167 aa8.3□□□□□ -1.08
CSNK1E-212ENST00000494610 SPANXN1Q5VSR9 72 aa8.3□□□□□ -1.08
CSNK1E-212ENST00000494610 LYZL1Q6UWQ5 148 aa8.3□□□□□ -1.08
CSNK1E-212ENST00000494610 UBE2DNLQ8IWF7 75 aa8.3□□□□□ -1.08
CSNK1E-212ENST00000494610 MAPKAPK5-AS1Q8N8E1 139 aa8.3□□□□□ -1.08
CSNK1E-212ENST00000494610 GTSF1Q8WW33 167 aa8.3□□□□□ -1.08
CSNK1E-212ENST00000494610 FAM210BQ96KR6 192 aa8.3□□□□□ -1.08
CSNK1E-212ENST00000494610 C9orf85Q96MD7 179 aa8.3□□□□□ -1.08
CSNK1E-212ENST00000494610 TEX48A0A1B0GUV7 120 aa8.29□□□□□ -1.08
CSNK1E-212ENST00000494610 HLA-DQA1P01909 254 aa8.29□□□□□ -1.08
CSNK1E-212ENST00000494610 GZMBP10144 247 aa8.29□□□□□ -1.08
CSNK1E-212ENST00000494610 HTN1P15515 57 aa8.29□□□□□ -1.08
CSNK1E-212ENST00000494610 HTN3P15516 51 aa8.29□□□□□ -1.08
CSNK1E-212ENST00000494610 RNASE8Q8TDE3 154 aaKnown RBP8.29□□□□□ -1.08
CSNK1E-212ENST00000494610 PTH2Q96A98 100 aa8.29□□□□□ -1.08
CSNK1E-212ENST00000494610 AP1S3Q96PC3 154 aa8.29□□□□□ -1.08
CSNK1E-212ENST00000494610 SCRT2Q9NQ03 307 aa8.29□□□□□ -1.08
CSNK1E-212ENST00000494610 M0R2P5 195 aa8.28□□□□□ -1.08
CSNK1E-212ENST00000494610 NXPH4O95158 308 aa8.28□□□□□ -1.08
CSNK1E-212ENST00000494610 RNASE3P12724 160 aaKnown RBP8.28□□□□□ -1.08
CSNK1E-212ENST00000494610 Q6ZQT7 251 aa8.28□□□□□ -1.08
CSNK1E-212ENST00000494610 YPEL4Q96NS1 127 aa8.28□□□□□ -1.08
CSNK1E-212ENST00000494610 TIMM8BQ9Y5J9 83 aaPredicted RBP8.28□□□□□ -1.08
CSNK1E-212ENST00000494610 TGIF2-C20orf24A0A0A6YYL0 155 aa8.27□□□□□ -1.09
CSNK1E-212ENST00000494610 A0A1B0GXF2 115 aa8.27□□□□□ -1.09
CSNK1E-212ENST00000494610 C16orf90A8MZG2 172 aa8.27□□□□□ -1.09
CSNK1E-212ENST00000494610 GNRH2O43555 120 aa8.27□□□□□ -1.09
CSNK1E-212ENST00000494610 TWIST1Q15672 202 aa8.27□□□□□ -1.09
CSNK1E-212ENST00000494610 MRPL54Q6P161 138 aaKnown RBP8.27□□□□□ -1.09
CSNK1E-212ENST00000494610 GNB1LQ9BYB4 327 aa8.27□□□□□ -1.09
CSNK1E-212ENST00000494610 SMIM17P0DL12 118 aa8.26□□□□□ -1.09
CSNK1E-212ENST00000494610 RAB5AP20339 215 aa8.26□□□□□ -1.09
CSNK1E-212ENST00000494610 RAB4BP61018 213 aa8.26□□□□□ -1.09
CSNK1E-212ENST00000494610 DAZ2Q13117 558 aaKnown RBP8.26□□□□□ -1.09
CSNK1E-212ENST00000494610 C1orf134Q5TEV5 83 aa8.26□□□□□ -1.09
CSNK1E-212ENST00000494610 C11orf72Q8NBR9 251 aa8.26□□□□□ -1.09
CSNK1E-212ENST00000494610 OR10AG1Q8NH19 301 aa8.26□□□□□ -1.09
CSNK1E-212ENST00000494610 MYCBP2O75592 4640 aa8.25□□□□□ -1.09
CSNK1E-212ENST00000494610 COLCA2A8K830 154 aa8.25□□□□□ -1.09
CSNK1E-212ENST00000494610 A8MWV9 139 aa8.25□□□□□ -1.09
CSNK1E-212ENST00000494610 M0R381 172 aa8.25□□□□□ -1.09
CSNK1E-212ENST00000494610 RHODO00212 210 aa8.25□□□□□ -1.09
CSNK1E-212ENST00000494610 SPINK4O60575 86 aa8.25□□□□□ -1.09
CSNK1E-212ENST00000494610 PRM2P04554 102 aa8.25□□□□□ -1.09
CSNK1E-212ENST00000494610 NTF3P20783 257 aa8.25□□□□□ -1.09
CSNK1E-212ENST00000494610 FAM222AQ5U5X8 452 aa8.25□□□□□ -1.09
CSNK1E-212ENST00000494610 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.25□□□□□ -1.09
CSNK1E-212ENST00000494610 GATD1Q8NB37 220 aa8.25□□□□□ -1.09
CSNK1E-212ENST00000494610 GSN-AS1Q9NRJ2 163 aa8.25□□□□□ -1.09
CSNK1E-212ENST00000494610 MDFICQ9P1T7 246 aa8.25□□□□□ -1.09
CSNK1E-212ENST00000494610 LYRM9A8MSI8 78 aa8.24□□□□□ -1.09
CSNK1E-212ENST00000494610 CIDEAO60543 219 aa8.24□□□□□ -1.09
CSNK1E-212ENST00000494610 SPART-AS1P0CW21 52 aa8.24□□□□□ -1.09
CSNK1E-212ENST00000494610 RPS10P46783 165 aaKnown RBP8.24□□□□□ -1.09
CSNK1E-212ENST00000494610 CAMPP49913 170 aa8.24□□□□□ -1.09
CSNK1E-212ENST00000494610 ZNF876PQ49A33 203 aa8.24□□□□□ -1.09
CSNK1E-212ENST00000494610 FRZBQ92765 325 aa8.24□□□□□ -1.09
CSNK1E-212ENST00000494610 TMEM191AQ9H0A3 160 aa8.24□□□□□ -1.09
CSNK1E-212ENST00000494610 DPH3P1Q9H4G8 78 aa8.24□□□□□ -1.09
CSNK1E-212ENST00000494610 DKK2Q9UBU2 259 aa8.24□□□□□ -1.09
CSNK1E-212ENST00000494610 RASL10AQ92737 203 aa8.23□□□□□ -1.09
CSNK1E-212ENST00000494610 TRAPPC1Q9Y5R8 145 aa8.23□□□□□ -1.09
CSNK1E-212ENST00000494610 VPS13BQ7Z7G8 4022 aa8.23□□□□□ -1.09
CSNK1E-212ENST00000494610 TRGV1A0A0A0MS02 117 aa8.22□□□□□ -1.09
CSNK1E-212ENST00000494610 CDK2AP2O75956 126 aa8.22□□□□□ -1.09
CSNK1E-212ENST00000494610 AZU1P20160 251 aa8.22□□□□□ -1.09
CSNK1E-212ENST00000494610 DMRTA1Q5VZB9 504 aa8.22□□□□□ -1.09
CSNK1E-212ENST00000494610 TMEM136Q6ZRR5 245 aa8.22□□□□□ -1.09
CSNK1E-212ENST00000494610 MUC21A0A0G2JKD1 596 aa8.21□□□□□ -1.1
CSNK1E-212ENST00000494610 MUC21A0A140T8X8 626 aa8.21□□□□□ -1.1
CSNK1E-212ENST00000494610 C1orf196B1AJZ1 125 aa8.21□□□□□ -1.1
CSNK1E-212ENST00000494610 APCSP02743 223 aa8.21□□□□□ -1.1
CSNK1E-212ENST00000494610 PPBPP02775 128 aa8.21□□□□□ -1.1
CSNK1E-212ENST00000494610 Q8N1X5 172 aa8.21□□□□□ -1.1
CSNK1E-212ENST00000494610 MRAP2Q96G30 205 aa8.21□□□□□ -1.1
CSNK1E-212ENST00000494610 MRPL18Q9H0U6 180 aaKnown RBP8.21□□□□□ -1.1
CSNK1E-212ENST00000494610 NOP10Q9NPE3 64 aaKnown RBP8.21□□□□□ -1.1
CSNK1E-212ENST00000494610 TRGV2A0A075B6R0 118 aa8.2□□□□□ -1.1
CSNK1E-212ENST00000494610 TRAV4A0A0B4J268 109 aa8.2□□□□□ -1.1
CSNK1E-212ENST00000494610 PLAC8L1A1L4L8 177 aa8.2□□□□□ -1.1
CSNK1E-212ENST00000494610 PPP1R17O96001 155 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms