RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 B4DEV8 164 aa8.3□□□□□ -1.08
SKA1-205ENST00000494518 IFNA7P01567 189 aa8.3□□□□□ -1.08
SKA1-205ENST00000494518 TOR2AQ5JU69 321 aa8.3□□□□□ -1.08
SKA1-205ENST00000494518 SAPCD1Q5SSQ6 148 aa8.3□□□□□ -1.08
SKA1-205ENST00000494518 UFSP1Q6NVU6 142 aa8.3□□□□□ -1.08
SKA1-205ENST00000494518 Q86TA4 180 aa8.3□□□□□ -1.08
SKA1-205ENST00000494518 UBE2WQ96B02 151 aa8.3□□□□□ -1.08
SKA1-205ENST00000494518 ACTR3CQ9C0K3 210 aaPredicted RBP8.3□□□□□ -1.08
SKA1-205ENST00000494518 URGCP-MRPS24S4R325 110 aa8.3□□□□□ -1.08
SKA1-205ENST00000494518 TMSB15BA0A087X1C1 80 aa8.29□□□□□ -1.08
SKA1-205ENST00000494518 FABP5P3A8MUU1 101 aa8.29□□□□□ -1.08
SKA1-205ENST00000494518 KRTAP29-1A8MX34 341 aaPredicted RBP8.29□□□□□ -1.08
SKA1-205ENST00000494518 MBP02144 154 aa8.29□□□□□ -1.08
SKA1-205ENST00000494518 ARMS2P0C7Q2 107 aa8.29□□□□□ -1.08
SKA1-205ENST00000494518 FGF8P55075 233 aaPredicted RBP8.29□□□□□ -1.08
SKA1-205ENST00000494518 NIT1Q86X76 327 aa8.29□□□□□ -1.08
SKA1-205ENST00000494518 ZC2HC1AQ96GY0 325 aa8.29□□□□□ -1.08
SKA1-205ENST00000494518 A0A087WWC5 75 aa8.28□□□□□ -1.08
SKA1-205ENST00000494518 PEX7O00628 323 aa8.28□□□□□ -1.08
SKA1-205ENST00000494518 SH2D1AO60880 128 aa8.28□□□□□ -1.08
SKA1-205ENST00000494518 CRIP1P50238 77 aa8.28□□□□□ -1.08
SKA1-205ENST00000494518 ZNF726P1Q15940 193 aa8.28□□□□□ -1.08
SKA1-205ENST00000494518 Q5BKY6 102 aa8.28□□□□□ -1.08
SKA1-205ENST00000494518 RPL7L1Q6DKI1 246 aaKnown RBP8.28□□□□□ -1.08
SKA1-205ENST00000494518 SYT8Q8NBV8 401 aa8.28□□□□□ -1.08
SKA1-205ENST00000494518 OR11H4Q8NGC9 324 aa8.28□□□□□ -1.08
SKA1-205ENST00000494518 DEFB104AQ8WTQ1 72 aa8.28□□□□□ -1.08
SKA1-205ENST00000494518 RMI2Q96E14 147 aa8.28□□□□□ -1.08
SKA1-205ENST00000494518 AQP10Q96PS8 301 aa8.28□□□□□ -1.08
SKA1-205ENST00000494518 IL36BQ9NZH7 164 aa8.28□□□□□ -1.08
SKA1-205ENST00000494518 UBR4Q5T4S7 5183 aa8.27□□□□□ -1.09
SKA1-205ENST00000494518 A0A1W2PRE2 83 aa8.27□□□□□ -1.09
SKA1-205ENST00000494518 KRBOX1C9JBD0 128 aa8.27□□□□□ -1.09
SKA1-205ENST00000494518 M0R381 172 aa8.27□□□□□ -1.09
SKA1-205ENST00000494518 EIF4EBP3O60516 100 aaPredicted RBP8.27□□□□□ -1.09
SKA1-205ENST00000494518 SERF2P84101 59 aa8.27□□□□□ -1.09
SKA1-205ENST00000494518 TNFSF18Q9UNG2 199 aa8.27□□□□□ -1.09
SKA1-205ENST00000494518 A0A087WX48 190 aa8.26□□□□□ -1.09
SKA1-205ENST00000494518 RNF222A6NCQ9 220 aa8.26□□□□□ -1.09
SKA1-205ENST00000494518 RHODO00212 210 aa8.26□□□□□ -1.09
SKA1-205ENST00000494518 PIK3CD-AS1Q5SR53 167 aa8.26□□□□□ -1.09
SKA1-205ENST00000494518 Q8N976 141 aa8.26□□□□□ -1.09
SKA1-205ENST00000494518 CIRBP-AS1Q8TBR5 109 aa8.26□□□□□ -1.09
SKA1-205ENST00000494518 CHAC1Q9BUX1 264 aa8.26□□□□□ -1.09
SKA1-205ENST00000494518 MED28Q9H204 178 aa8.26□□□□□ -1.09
SKA1-205ENST00000494518 PHLDA3Q9Y5J5 127 aa8.26□□□□□ -1.09
SKA1-205ENST00000494518 COX11Q9Y6N1 276 aa8.26□□□□□ -1.09
SKA1-205ENST00000494518 CTXND1A0A1B0GTU2 59 aa8.25□□□□□ -1.09
SKA1-205ENST00000494518 FAM74A7A6NL05 159 aa8.25□□□□□ -1.09
SKA1-205ENST00000494518 TPT1P13693 172 aaKnown RBP8.25□□□□□ -1.09
SKA1-205ENST00000494518 KRTAP10-4P60372 401 aaPredicted RBP8.25□□□□□ -1.09
SKA1-205ENST00000494518 SFRP2Q96HF1 295 aa8.25□□□□□ -1.09
SKA1-205ENST00000494518 KRTAP9-9Q9BYP9 154 aa8.25□□□□□ -1.09
SKA1-205ENST00000494518 KRTAP9-4Q9BYQ2 154 aa8.25□□□□□ -1.09
SKA1-205ENST00000494518 FXYD6-FXYD2A0A087WZ82 144 aa8.24□□□□□ -1.09
SKA1-205ENST00000494518 TMEM262E9PQX1 116 aa8.24□□□□□ -1.09
SKA1-205ENST00000494518 IGLV2-8P01709 118 aa8.24□□□□□ -1.09
SKA1-205ENST00000494518 FAM162BQ5T6X4 162 aa8.24□□□□□ -1.09
SKA1-205ENST00000494518 KCNIP4Q6PIL6 250 aa8.24□□□□□ -1.09
SKA1-205ENST00000494518 UBE2D3P61077 147 aa8.23□□□□□ -1.09
SKA1-205ENST00000494518 UBE2G1P62253 170 aa8.23□□□□□ -1.09
SKA1-205ENST00000494518 UBE2D2P62837 147 aa8.23□□□□□ -1.09
SKA1-205ENST00000494518 RPL36AP83881 106 aaKnown RBP8.23□□□□□ -1.09
SKA1-205ENST00000494518 DNLZQ5SXM8 178 aa8.23□□□□□ -1.09
SKA1-205ENST00000494518 C15orf54Q8N8G6 183 aa8.23□□□□□ -1.09
SKA1-205ENST00000494518 INO80EQ8NBZ0 244 aaPredicted RBP8.23□□□□□ -1.09
SKA1-205ENST00000494518 RPL36ALQ969Q0 106 aaKnown RBP8.23□□□□□ -1.09
SKA1-205ENST00000494518 BORCS7-ASMTA0A0B4J1R7 106 aa8.22□□□□□ -1.09
SKA1-205ENST00000494518 SEC11BP0C7V7 166 aa8.22□□□□□ -1.09
SKA1-205ENST00000494518 AKR1C8PQ5T2L2 129 aa8.22□□□□□ -1.09
SKA1-205ENST00000494518 ZFP82Q8N141 532 aa8.22□□□□□ -1.09
SKA1-205ENST00000494518 HIST1H2BAQ96A08 127 aa8.22□□□□□ -1.09
SKA1-205ENST00000494518 C1orf43Q9BWL3 253 aa8.22□□□□□ -1.09
SKA1-205ENST00000494518 TRBV7-3A0A075B6L6 115 aa8.21□□□□□ -1.1
SKA1-205ENST00000494518 MUC21A0A0G2JKD1 596 aa8.21□□□□□ -1.1
SKA1-205ENST00000494518 MUC21A0A140T8X8 626 aa8.21□□□□□ -1.1
SKA1-205ENST00000494518 MAP1LC3B2A6NCE7 125 aa8.21□□□□□ -1.1
SKA1-205ENST00000494518 HLA-DQA1P01909 254 aa8.21□□□□□ -1.1
SKA1-205ENST00000494518 CRPP02741 224 aa8.21□□□□□ -1.1
SKA1-205ENST00000494518 RPL19P84098 196 aaKnown RBP8.21□□□□□ -1.1
SKA1-205ENST00000494518 ELOBQ15370 118 aa8.21□□□□□ -1.1
SKA1-205ENST00000494518 ZNF56Q15929 161 aa8.21□□□□□ -1.1
SKA1-205ENST00000494518 ZNF674Q2M3X9 581 aa8.21□□□□□ -1.1
SKA1-205ENST00000494518 MPV17L2Q567V2 206 aa8.21□□□□□ -1.1
SKA1-205ENST00000494518 CST9LP1Q5W188 147 aa8.21□□□□□ -1.1
SKA1-205ENST00000494518 ENHOQ6UWT2 76 aa8.21□□□□□ -1.1
SKA1-205ENST00000494518 FMC1Q96HJ9 113 aa8.21□□□□□ -1.1
SKA1-205ENST00000494518 MAP1LC3BQ9GZQ8 125 aa8.21□□□□□ -1.1
SKA1-205ENST00000494518 ZFP30Q9Y2G7 519 aa8.21□□□□□ -1.1
SKA1-205ENST00000494518 TRBV10-1A0A0K0K1A3 114 aa8.2□□□□□ -1.1
SKA1-205ENST00000494518 GIPP09681 153 aaPredicted RBP8.2□□□□□ -1.1
SKA1-205ENST00000494518 AKR1C3P42330 323 aa8.2□□□□□ -1.1
SKA1-205ENST00000494518 SSTP61278 116 aa8.2□□□□□ -1.1
SKA1-205ENST00000494518 ATRAIDQ6UW56 229 aa8.2□□□□□ -1.1
SKA1-205ENST00000494518 CLPSL2Q6UWE3 100 aa8.2□□□□□ -1.1
SKA1-205ENST00000494518 CHCHD7Q9BUK0 85 aa8.2□□□□□ -1.1
SKA1-205ENST00000494518 TRBV6-8A0A0A6YYG3 113 aa8.19□□□□□ -1.1
SKA1-205ENST00000494518 A0A1B0GV50 99 aa8.19□□□□□ -1.1
SKA1-205ENST00000494518 USP17L23D6RBM5 183 aa8.19□□□□□ -1.1
SKA1-205ENST00000494518 PTTG1O95997 202 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms