RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 FANCD2Q9BXW9 1451 aa1.32□□□□□ -2.2
PTPN12-212ENST00000494248 SHANK2Q9UPX8 1470 aa1.32□□□□□ -2.2
PTPN12-212ENST00000494248 TET2Q6N021 2002 aaPredicted RBP1.32□□□□□ -2.2
PTPN12-212ENST00000494248 NUP205Q92621 2012 aa1.32□□□□□ -2.2
PTPN12-212ENST00000494248 IGLV2-18A0A075B6J9 118 aa1.32□□□□□ -2.2
PTPN12-212ENST00000494248 C7orf77A4D0Y5 90 aa1.32□□□□□ -2.2
PTPN12-212ENST00000494248 HCG22E2RYF7 251 aa1.32□□□□□ -2.2
PTPN12-212ENST00000494248 H7BZZ5 65 aa1.32□□□□□ -2.2
PTPN12-212ENST00000494248 PSCAO43653 123 aa1.32□□□□□ -2.2
PTPN12-212ENST00000494248 SIX6O95475 246 aa1.32□□□□□ -2.2
PTPN12-212ENST00000494248 ASAH2BP0C7U1 165 aa1.32□□□□□ -2.2
PTPN12-212ENST00000494248 SMIM11AP58511 58 aa1.32□□□□□ -2.2
PTPN12-212ENST00000494248 KLKP1Q107X0 134 aa1.32□□□□□ -2.2
PTPN12-212ENST00000494248 CFAP126Q5VTH2 177 aa1.32□□□□□ -2.2
PTPN12-212ENST00000494248 LYPD5Q6UWN5 251 aa1.32□□□□□ -2.2
PTPN12-212ENST00000494248 C2orf82Q6UX34 121 aa1.32□□□□□ -2.2
PTPN12-212ENST00000494248 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.32□□□□□ -2.2
PTPN12-212ENST00000494248 LINC00643Q86TS7 51 aa1.32□□□□□ -2.2
PTPN12-212ENST00000494248 SPTSSBQ8NFR3 76 aa1.32□□□□□ -2.2
PTPN12-212ENST00000494248 CMTM2Q8TAZ6 248 aa1.32□□□□□ -2.2
PTPN12-212ENST00000494248 FAM167A-AS1Q96KT0 104 aa1.32□□□□□ -2.2
PTPN12-212ENST00000494248 ODF3Q96PU9 254 aa1.32□□□□□ -2.2
PTPN12-212ENST00000494248 TIMM21Q9BVV7 248 aa1.32□□□□□ -2.2
PTPN12-212ENST00000494248 CYSTM1Q9H1C7 97 aa1.32□□□□□ -2.2
PTPN12-212ENST00000494248 C22orf24Q9Y442 160 aa1.32□□□□□ -2.2
PTPN12-212ENST00000494248 ANK1P16157 1881 aa1.32□□□□□ -2.2
PTPN12-212ENST00000494248 KDM6BO15054 1643 aa1.32□□□□□ -2.2
PTPN12-212ENST00000494248 IQGAP3Q86VI3 1631 aa1.32□□□□□ -2.2
PTPN12-212ENST00000494248 LRP4O75096 1905 aa1.32□□□□□ -2.2
PTPN12-212ENST00000494248 MYH13Q9UKX3 1938 aa1.32□□□□□ -2.2
PTPN12-212ENST00000494248 PPRC1Q5VV67 1664 aaKnown RBP1.32□□□□□ -2.2
PTPN12-212ENST00000494248 LTN1O94822 1766 aa1.31□□□□□ -2.2
PTPN12-212ENST00000494248 STRCQ7RTU9 1775 aa1.31□□□□□ -2.2
PTPN12-212ENST00000494248 MEGF6O75095 1541 aa1.31□□□□□ -2.2
PTPN12-212ENST00000494248 MYO5AQ9Y4I1 1855 aaKnown RBP1.31□□□□□ -2.2
PTPN12-212ENST00000494248 HELZP42694 1942 aaKnown RBP1.31□□□□□ -2.2
PTPN12-212ENST00000494248 POLEQ07864 2286 aa1.31□□□□□ -2.2
PTPN12-212ENST00000494248 MCM3APO60318 1980 aa1.31□□□□□ -2.2
PTPN12-212ENST00000494248 ABCA9Q8IUA7 1624 aa1.31□□□□□ -2.2
PTPN12-212ENST00000494248 MYO3AQ8NEV4 1616 aa1.31□□□□□ -2.2
PTPN12-212ENST00000494248 MADDQ8WXG6 1647 aa1.31□□□□□ -2.2
PTPN12-212ENST00000494248 IGKV3D-11A0A0A0MRZ8 115 aa1.31□□□□□ -2.2
PTPN12-212ENST00000494248 TRAV12-1A0A0B4J245 112 aa1.31□□□□□ -2.2
PTPN12-212ENST00000494248 A0A0J9YX75 114 aa1.31□□□□□ -2.2
PTPN12-212ENST00000494248 CXorf51AA0A1B0GTR3 108 aa1.31□□□□□ -2.2
PTPN12-212ENST00000494248 WISP3O95389 354 aaPredicted RBP1.31□□□□□ -2.2
PTPN12-212ENST00000494248 UBE2D3P61077 147 aa1.31□□□□□ -2.2
PTPN12-212ENST00000494248 UBE2D2P62837 147 aa1.31□□□□□ -2.2
PTPN12-212ENST00000494248 ERHP84090 104 aaKnown RBP1.31□□□□□ -2.2
PTPN12-212ENST00000494248 KRTAP25-1Q3LHN0 102 aa1.31□□□□□ -2.2
PTPN12-212ENST00000494248 KPRPQ5T749 579 aaPredicted RBP1.31□□□□□ -2.2
PTPN12-212ENST00000494248 KRTAP26-1Q6PEX3 210 aa1.31□□□□□ -2.2
PTPN12-212ENST00000494248 ZNF833PQ6ZTB9 187 aa1.31□□□□□ -2.2
PTPN12-212ENST00000494248 VMO1Q7Z5L0 202 aa1.31□□□□□ -2.2
PTPN12-212ENST00000494248 Q8TAT8 98 aa1.31□□□□□ -2.2
PTPN12-212ENST00000494248 HIGD2AQ9BW72 106 aa1.31□□□□□ -2.2
PTPN12-212ENST00000494248 SCRT1Q9BWW7 348 aa1.31□□□□□ -2.2
PTPN12-212ENST00000494248 MANBALQ9NQG1 85 aa1.31□□□□□ -2.2
PTPN12-212ENST00000494248 HIGD1BQ9P298 99 aa1.31□□□□□ -2.2
PTPN12-212ENST00000494248 PRO1854Q9UHT4 67 aa1.31□□□□□ -2.2
PTPN12-212ENST00000494248 PSORS1C2Q9UIG4 136 aa1.31□□□□□ -2.2
PTPN12-212ENST00000494248 KLK12Q9UKR0 248 aa1.31□□□□□ -2.2
PTPN12-212ENST00000494248 LHFPL6Q9Y693 200 aa1.31□□□□□ -2.2
PTPN12-212ENST00000494248 TET3O43151 1660 aa1.31□□□□□ -2.2
PTPN12-212ENST00000494248 PIKFYVEQ9Y2I7 2098 aa1.31□□□□□ -2.2
PTPN12-212ENST00000494248 KNDC1Q76NI1 1749 aa1.31□□□□□ -2.2
PTPN12-212ENST00000494248 WDR90Q96KV7 1748 aa1.31□□□□□ -2.2
PTPN12-212ENST00000494248 TNS1Q9HBL0 1735 aaKnown RBP1.31□□□□□ -2.2
PTPN12-212ENST00000494248 RGPD4Q7Z3J3 1758 aa1.31□□□□□ -2.2
PTPN12-212ENST00000494248 PLXNA3P51805 1871 aa1.31□□□□□ -2.2
PTPN12-212ENST00000494248 TNRC6AQ8NDV7 1962 aaKnown RBP1.3□□□□□ -2.2
PTPN12-212ENST00000494248 TIAM1Q13009 1591 aa1.3□□□□□ -2.2
PTPN12-212ENST00000494248 TARBP1Q13395 1621 aaKnown RBP1.3□□□□□ -2.2
PTPN12-212ENST00000494248 SHANK3Q9BYB0 1731 aa1.3□□□□□ -2.2
PTPN12-212ENST00000494248 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.3□□□□□ -2.2
PTPN12-212ENST00000494248 IGLV3-16A0A075B6K0 115 aa1.3□□□□□ -2.2
PTPN12-212ENST00000494248 TRAV23DV6A0A075B6W5 121 aa1.3□□□□□ -2.2
PTPN12-212ENST00000494248 COX6CP09669 75 aa1.3□□□□□ -2.2
PTPN12-212ENST00000494248 P0C880 135 aa1.3□□□□□ -2.2
PTPN12-212ENST00000494248 SMIM13P0DJ93 91 aa1.3□□□□□ -2.2
PTPN12-212ENST00000494248 EFNA4P52798 201 aa1.3□□□□□ -2.2
PTPN12-212ENST00000494248 PDE6HQ13956 83 aa1.3□□□□□ -2.2
PTPN12-212ENST00000494248 ELOBQ15370 118 aa1.3□□□□□ -2.2
PTPN12-212ENST00000494248 IGFBP7Q16270 282 aa1.3□□□□□ -2.2
PTPN12-212ENST00000494248 DEFB113Q30KQ7 82 aa1.3□□□□□ -2.2
PTPN12-212ENST00000494248 ZNF791Q3KP31 576 aaPredicted RBP1.3□□□□□ -2.2
PTPN12-212ENST00000494248 TMEM170BQ5T4T1 132 aa1.3□□□□□ -2.2
PTPN12-212ENST00000494248 SPINT4Q6UDR6 99 aa1.3□□□□□ -2.2
PTPN12-212ENST00000494248 ZNF818PQ6ZRF7 136 aa1.3□□□□□ -2.2
PTPN12-212ENST00000494248 Q9BRP9 147 aa1.3□□□□□ -2.2
PTPN12-212ENST00000494248 LIMD2Q9BT23 127 aa1.3□□□□□ -2.2
PTPN12-212ENST00000494248 ATG2BQ96BY7 2078 aa1.3□□□□□ -2.2
PTPN12-212ENST00000494248 URB2Q14146 1524 aaKnown RBP1.3□□□□□ -2.2
PTPN12-212ENST00000494248 DIP2CQ9Y2E4 1556 aa1.3□□□□□ -2.2
PTPN12-212ENST00000494248 LRP5O75197 1615 aa1.29□□□□□ -2.2
PTPN12-212ENST00000494248 CLTCQ00610 1675 aaKnown RBP1.29□□□□□ -2.2
PTPN12-212ENST00000494248 MYO5CQ9NQX4 1742 aa1.29□□□□□ -2.2
PTPN12-212ENST00000494248 SCN11AQ9UI33 1791 aa1.29□□□□□ -2.2
PTPN12-212ENST00000494248 PLXNA4Q9HCM2 1894 aa1.29□□□□□ -2.2
PTPN12-212ENST00000494248 NYNRINQ9P2P1 1898 aaKnown RBP1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms